CX295375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 2.265e-76 Identity = 150/219 (68.49%), Postives = 169/219 (77.17%), Query Frame = 3 Query: 6 NGMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQK----DNEEGDNK--------AXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 626 N KRGF++TV DLKLNLS+ + + K + KPPAKAQVVGWPPVRSFRKN+M+ QK D EG++K + VA+VKVSMDGAPYLRK+DLKLYK+YQ+LS+AL KMFSSFTIGN G QGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPW+MFVDSCKR+RIMKGSEAIGLAPRA+EKCKNRS Sbjct: 26 NNGKRGFSETV-DLKLNLSSTAMDSVSKVDLENMKEK-------VVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKCKNRS 236
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2) HSP 1 Score: 280.796 bits (717), Expect = 4.271e-75 Identity = 144/206 (69.90%), Postives = 166/206 (80.58%), Query Frame = 3 Query: 9 GMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 626 G KRGF++TV DLKLNL + + G +D+ T G T D SKPPAKAQVVGWPPVR++RKN+MA QK E +A VAFVKVSMDGAPYLRKVDLK+Y SY++LSDAL KMFSSFT+G+ G+QGM DFMNESK++DLLN S+YVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMKGSEAIGLAPRA+EK KNRS Sbjct: 28 GNKRGFSETV-DLKLNLQSNKQGHVDL--NTNGAPKEKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEA--EEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 2.344e-73 Identity = 150/223 (67.26%), Postives = 165/223 (73.99%), Query Frame = 3 Query: 15 KRGFADT----------VVDLKLNLSTKESGGIDVI-------QKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAI--GLAPRAVEKCKNRS 626 KRGF++T VDL LNLS+KE+ KT K + A D +KPPAK QVVGWPPVRSFRKN++AVQK E K N +FVKVSMDGAPYLRKVDLK+YKSY+ELSD+LGKMFSSFT GNC SQGMKDFMNESKL DLLN SDYVPTYEDKDGDWMLVGDVPW+MFV+SCKRLRIMKG EAI GLAPRA+ KCKNRS Sbjct: 25 KRGFSETETGHEDESATTVDLMLNLSSKEAATTAAAAADPTDKHKTLPKEKTLLPA-DPAKPPAKTQVVGWPPVRSFRKNMLAVQKSVGEESEK---NSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGMKDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKCKNRS 243
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 3.384e-72 Identity = 141/213 (66.20%), Postives = 166/213 (77.93%), Query Frame = 3 Query: 9 GMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDN---EEGDNKAXXXXXXNVA---FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEK-CKNRS 626 G KRGF++TV DL LNL + + G +D ++ T D SKPPAKAQVVGWPPVR++RKN+M QK + EE ++ A VKVSMDGAPYLRKVDLK+YKSYQ+LSDAL KMFSSFT+GN G+QGM DFMNESKL++LLN S+YVP+YEDKDGDWMLVGDVPW+MFV+SCKRLRIMKGSEA+GLAPRA+EK CKNRS Sbjct: 33 GSKRGFSETV-DLMLNLQSNKEGSVD-LKNVSAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEKYCKNRS 243
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 5.057e-68 Identity = 146/244 (59.84%), Postives = 166/244 (68.03%), Query Frame = 3 Query: 15 KRGFADTVVDLKLNLST----------KESGG-------IDVI------------------QKTKGKSASATGATDLSKPPA-KAQVVGWPPVRSFRKNIMAVQ----KDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 626 KRGFA+T+ DLKL L KE +D++ +++ +S+ T A D KP A KAQVVGWPPVRS+RKNI+AVQ KD +G AFVKVSMDGAPYLRKVDLK+YKSY ELS AL KMFSSFTIGNCGS G+ MNESK+ DLLNGS+YVPTYEDKDGDWMLVGDVPW+MFV+SCKRLRIMKGSEAIGLAPRA+EKCKNRS Sbjct: 36 KRGFAETI-DLKLKLEPAAAAVDDDDDKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPRAPKAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNG-MNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2) HSP 1 Score: 250.751 bits (639), Expect = 4.733e-66 Identity = 133/213 (62.44%), Postives = 159/213 (74.65%), Query Frame = 3 Query: 3 INGMKRGFADTVVDLKLNLST----KESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIG-NCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 626 + G KRGF++TV DLKLNL+ KE + K SA D +KPPAKAQVVGWPPVRS+RKN+M + + G A AFVKVSMDGAPYLRK+DL++YKSY ELS+AL MFSSFT+G + G +GM DFMNE KL+DL+N DYVP+YEDKDGDWMLVGDVPW MFVD+CKRLR+MKGS+AIGLAPRA+EKCK+R+ Sbjct: 27 VTGNKRGFSETV-DLKLNLNNEPANKEGSTTHDVVTFDSKEKSAC-PKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKSSGGPEAA--------AFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSRA 229
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 6.850e-57 Identity = 120/220 (54.55%), Postives = 153/220 (69.55%), Query Frame = 3 Query: 3 INGMKRGFADTVVDLK-LNLSTKESGGIDVIQKTKGKSASATGATDLSK--------PPAKAQVVGWPPVRSFRKNIMA--VQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNR 623 ++G KRGFADT + + S + GGI+++ K K S + + S P AKAQVVGWPP+RS+RKN MA K+ +E D K V FVKVSMDGAPYLRKVDL+ Y SYQ+LS AL KMFS FT+G CG G ++ M+E KL DLL+GS++V TYEDKDGDWMLVGDVPW++F ++C++L+IMKGS++IGLAP AVEK KN+ Sbjct: 103 VSGNKRGFADTWDEFSGVKGSVRPGGGINMMLSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGL----GVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEKSKNK 318
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 9.892e-56 Identity = 120/226 (53.10%), Postives = 153/226 (67.70%), Query Frame = 3 Query: 6 NGMKRGFADTV---VDLKLNLSTKESGGIDVIQKTKG-----------KSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQ-KDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL--APRAVEKCKNRS 626 +G KRGF+DT+ + K ++ T+++ T+ K S+T S P AKAQ+VGWPPVRS+RKN +A K+++E D + FVKVSMDGAPYLRKVDL+ Y +Y ELS AL KMF++FT+G CGS G KD ++E+KL DLLNG DYV TYEDKDGDWMLVGDVPW+MF+D CK+L+IMKG +AIGL APRA+EK K R+ Sbjct: 117 SGNKRGFSDTMDQFAEAKSSVYTEKNWMFPEAAATQSVTKKDVPQNIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGS----GALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAPRAMEKSKMRA 338
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 3.759e-55 Identity = 116/213 (54.46%), Postives = 146/213 (68.54%), Query Frame = 3 Query: 9 GMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSK---PPAKAQVVGWPPVRSFRKNIMAVQKDNEEG--DNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 626 G KRGFAD +V + +GG K +A A + K P AKAQVVGWPP+RS+RKN MA+ + +G D +A +VKVSMDGAPYLRKVDLK+YK+Y+ELS AL KMFS FT+G+ S G +D +++ +L+DL NG++ V TYEDKD DWMLVGDVPW MF DSC+RLRIMKGS+A+GLAPRA +K KNR+ Sbjct: 59 GAKRGFADAIVGGPAGQRREAAGG-----KAAAAAAEAEEEEEKKKAQAPAAKAQVVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDKSKNRN 266
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 4.909e-55 Identity = 112/183 (61.20%), Postives = 133/183 (72.68%), Query Frame = 3 Query: 102 KGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDN------KAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 626 K K +SAT P +KAQVVGWPP+RSFRKN MA + + G+N +A +VKVSM+GAPYLRK+DLK YKSY ELS AL KMFS FTIG GS G +D +NES+L DLL GS+YV TYEDKD DWMLVGDVPW+MF+ SCK+LRIMK SEAIGLAPR +EKC++R+ Sbjct: 129 KEKKSSATA------PASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKCRSRN 305 The following BLAST results are available for this feature:
BLAST of CX295375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295375 ID=CX295375; Name=CX295375; organism=Citrus clementina; type=EST; length=654bpback to top |