CX295375

Overview
NameCX295375
Unique NameCX295375
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 2.265e-76
Identity = 150/219 (68.49%), Postives = 169/219 (77.17%), Query Frame = 3
Query:    6 NGMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQK----DNEEGDNK--------AXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 626
            N  KRGF++TV DLKLNLS+     +  +     K         + KPPAKAQVVGWPPVRSFRKN+M+ QK    D  EG++K        +       VA+VKVSMDGAPYLRK+DLKLYK+YQ+LS+AL KMFSSFTIGN G QGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPW+MFVDSCKR+RIMKGSEAIGLAPRA+EKCKNRS
Sbjct:   26 NNGKRGFSETV-DLKLNLSSTAMDSVSKVDLENMKEK-------VVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKCKNRS 236          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 4.271e-75
Identity = 144/206 (69.90%), Postives = 166/206 (80.58%), Query Frame = 3
Query:    9 GMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 626
            G KRGF++TV DLKLNL + + G +D+   T G     T   D SKPPAKAQVVGWPPVR++RKN+MA QK  E    +A       VAFVKVSMDGAPYLRKVDLK+Y SY++LSDAL KMFSSFT+G+ G+QGM DFMNESK++DLLN S+YVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMKGSEAIGLAPRA+EK KNRS
Sbjct:   28 GNKRGFSETV-DLKLNLQSNKQGHVDL--NTNGAPKEKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEA--EEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.344e-73
Identity = 150/223 (67.26%), Postives = 165/223 (73.99%), Query Frame = 3
Query:   15 KRGFADT----------VVDLKLNLSTKESGGIDVI-------QKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAI--GLAPRAVEKCKNRS 626
            KRGF++T           VDL LNLS+KE+              KT  K  +   A D +KPPAK QVVGWPPVRSFRKN++AVQK   E   K       N +FVKVSMDGAPYLRKVDLK+YKSY+ELSD+LGKMFSSFT GNC SQGMKDFMNESKL DLLN SDYVPTYEDKDGDWMLVGDVPW+MFV+SCKRLRIMKG EAI  GLAPRA+ KCKNRS
Sbjct:   25 KRGFSETETGHEDESATTVDLMLNLSSKEAATTAAAAADPTDKHKTLPKEKTLLPA-DPAKPPAKTQVVGWPPVRSFRKNMLAVQKSVGEESEK---NSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGMKDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKCKNRS 243          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 3.384e-72
Identity = 141/213 (66.20%), Postives = 166/213 (77.93%), Query Frame = 3
Query:    9 GMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDN---EEGDNKAXXXXXXNVA---FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEK-CKNRS 626
            G KRGF++TV DL LNL + + G +D ++         T   D SKPPAKAQVVGWPPVR++RKN+M  QK +   EE  ++         A    VKVSMDGAPYLRKVDLK+YKSYQ+LSDAL KMFSSFT+GN G+QGM DFMNESKL++LLN S+YVP+YEDKDGDWMLVGDVPW+MFV+SCKRLRIMKGSEA+GLAPRA+EK CKNRS
Sbjct:   33 GSKRGFSETV-DLMLNLQSNKEGSVD-LKNVSAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEKYCKNRS 243          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 5.057e-68
Identity = 146/244 (59.84%), Postives = 166/244 (68.03%), Query Frame = 3
Query:   15 KRGFADTVVDLKLNLST----------KESGG-------IDVI------------------QKTKGKSASATGATDLSKPPA-KAQVVGWPPVRSFRKNIMAVQ----KDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 626
            KRGFA+T+ DLKL L            KE          +D++                  +++  +S+  T A D  KP A KAQVVGWPPVRS+RKNI+AVQ    KD  +G            AFVKVSMDGAPYLRKVDLK+YKSY ELS AL KMFSSFTIGNCGS G+   MNESK+ DLLNGS+YVPTYEDKDGDWMLVGDVPW+MFV+SCKRLRIMKGSEAIGLAPRA+EKCKNRS
Sbjct:   36 KRGFAETI-DLKLKLEPAAAAVDDDDDKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPRAPKAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNG-MNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2)

HSP 1 Score: 250.751 bits (639), Expect = 4.733e-66
Identity = 133/213 (62.44%), Postives = 159/213 (74.65%), Query Frame = 3
Query:    3 INGMKRGFADTVVDLKLNLST----KESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIG-NCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 626
            + G KRGF++TV DLKLNL+     KE      +     K  SA    D +KPPAKAQVVGWPPVRS+RKN+M   + +  G   A        AFVKVSMDGAPYLRK+DL++YKSY ELS+AL  MFSSFT+G + G +GM DFMNE KL+DL+N  DYVP+YEDKDGDWMLVGDVPW MFVD+CKRLR+MKGS+AIGLAPRA+EKCK+R+
Sbjct:   27 VTGNKRGFSETV-DLKLNLNNEPANKEGSTTHDVVTFDSKEKSAC-PKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKSSGGPEAA--------AFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSRA 229          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 6.850e-57
Identity = 120/220 (54.55%), Postives = 153/220 (69.55%), Query Frame = 3
Query:    3 INGMKRGFADTVVDLK-LNLSTKESGGIDVIQKTKGKSASATGATDLSK--------PPAKAQVVGWPPVRSFRKNIMA--VQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNR 623
            ++G KRGFADT  +   +  S +  GGI+++   K K  S +   + S         P AKAQVVGWPP+RS+RKN MA    K+ +E D K        V FVKVSMDGAPYLRKVDL+ Y SYQ+LS AL KMFS FT+G CG  G   ++ M+E KL DLL+GS++V TYEDKDGDWMLVGDVPW++F ++C++L+IMKGS++IGLAP AVEK KN+
Sbjct:  103 VSGNKRGFADTWDEFSGVKGSVRPGGGINMMLSPKVKDVSKSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGL----GVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEKSKNK 318          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 9.892e-56
Identity = 120/226 (53.10%), Postives = 153/226 (67.70%), Query Frame = 3
Query:    6 NGMKRGFADTV---VDLKLNLSTKESGGIDVIQKTKG-----------KSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQ-KDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL--APRAVEKCKNRS 626
            +G KRGF+DT+    + K ++ T+++        T+            K  S+T     S P AKAQ+VGWPPVRS+RKN +A   K+++E D +          FVKVSMDGAPYLRKVDL+ Y +Y ELS AL KMF++FT+G CGS G   KD ++E+KL DLLNG DYV TYEDKDGDWMLVGDVPW+MF+D CK+L+IMKG +AIGL  APRA+EK K R+
Sbjct:  117 SGNKRGFSDTMDQFAEAKSSVYTEKNWMFPEAAATQSVTKKDVPQNIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGS----GALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAPRAMEKSKMRA 338          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.759e-55
Identity = 116/213 (54.46%), Postives = 146/213 (68.54%), Query Frame = 3
Query:    9 GMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSK---PPAKAQVVGWPPVRSFRKNIMAVQKDNEEG--DNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 626
            G KRGFAD +V        + +GG     K    +A A    +  K   P AKAQVVGWPP+RS+RKN MA+ +   +G  D +A         +VKVSMDGAPYLRKVDLK+YK+Y+ELS AL KMFS FT+G+  S G   +D +++ +L+DL NG++ V TYEDKD DWMLVGDVPW MF DSC+RLRIMKGS+A+GLAPRA +K KNR+
Sbjct:   59 GAKRGFADAIVGGPAGQRREAAGG-----KAAAAAAEAEEEEEKKKAQAPAAKAQVVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDKSKNRN 266          
BLAST of CX295375 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 4.909e-55
Identity = 112/183 (61.20%), Postives = 133/183 (72.68%), Query Frame = 3
Query:  102 KGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDN------KAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 626
            K K +SAT       P +KAQVVGWPP+RSFRKN MA  +  + G+N      +A         +VKVSM+GAPYLRK+DLK YKSY ELS AL KMFS FTIG  GS G   +D +NES+L DLL GS+YV TYEDKD DWMLVGDVPW+MF+ SCK+LRIMK SEAIGLAPR +EKC++R+
Sbjct:  129 KEKKSSATA------PASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKCRSRN 305          
The following BLAST results are available for this feature:
BLAST of CX295375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
IAA16_ARATH2.265e-7668.49Auxin-responsive protein IAA16 OS=Arabidopsis thal... [more]
IAA14_ARATH4.271e-7569.90Auxin-responsive protein IAA14 OS=Arabidopsis thal... [more]
AUX28_SOYBN2.344e-7367.26Auxin-induced protein AUX28 OS=Glycine max GN=AUX2... [more]
IAA7_ARATH3.384e-7266.20Auxin-responsive protein IAA7 OS=Arabidopsis thali... [more]
IAA30_ORYSJ5.057e-6859.84Auxin-responsive protein IAA30 OS=Oryza sativa sub... [more]
IAA17_ARATH4.733e-6662.44Auxin-responsive protein IAA17 OS=Arabidopsis thal... [more]
IAA8_ARATH6.850e-5754.55Auxin-responsive protein IAA8 OS=Arabidopsis thali... [more]
IAA9_ARATH9.892e-5653.10Auxin-responsive protein IAA9 OS=Arabidopsis thali... [more]
IAA21_ORYSJ3.759e-5554.46Auxin-responsive protein IAA21 OS=Oryza sativa sub... [more]
IAA27_ARATH4.909e-5561.20Auxin-responsive protein IAA27 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC05071E09SK PhIFruit1 Citrus clementina cDNA clone C05071E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295375 ID=CX295375; Name=CX295375; organism=Citrus clementina; type=EST; length=654bp
ACATTAATGGCATGAAGAGAGGATTTGCAGACACCGTTGTTGATTTGAAG
CTAAATCTTTCAACAAAAGAGTCAGGTGGGATTGATGTAATTCAGAAGAC
GAAGGGCAAAAGTGCTTCTGCTACTGGGGCTACAGACCTTTCAAAGCCTC
CGGCCAAGGCACAAGTTGTGGGTTGGCCACCCGTTAGATCATTCAGAAAG
AACATCATGGCCGTCCAAAAGGACAATGAAGAAGGTGATAATAAGGCTAG
CAGCAGCAGCAGCAGCAATGTAGCTTTTGTTAAAGTGAGCATGGATGGTG
CCCCATACTTGCGCAAGGTTGATTTGAAGCTATACAAAAGCTACCAAGAA
CTCTCTGATGCCCTTGGCAAAATGTTCAGCTCTTTCACCATTGGTAACTG
TGGGTCACAAGGGATGAAGGATTTTATGAATGAGAGCAAACTGATTGATC
TTTTGAATGGCTCAGATTATGTACCTACTTATGAAGACAAAGATGGAGAT
TGGATGCTTGTTGGTGATGTACCATGGGATATGTTTGTTGATTCATGCAA
ACGCTTAAGAATAATGAAAGGATCCGAGGCCATTGGACTTGCACCAAGGG
CAGTTGAGAAGTGCAAGAACAGAAGCTGAAGATTTGATTATGATCAGCAA
CTTT
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