CX295392

Overview
NameCX295392
Unique NameCX295392
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295392 vs. ExPASy Swiss-Prot
Match: PSA_MOUSE (Puromycin-sensitive aminopeptidase OS=Mus musculus GN=Npepps PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.136e-20
Identity = 70/223 (31.39%), Postives = 110/223 (49.33%), Query Frame = 1
Query:   25 GYPVISVKVREEK----LELEQSQFLSSGSPGDG---QWIVPITLCCGSY-DVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEKKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAA-DARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTAL 666
            G+P+I V+  + +    L+L Q +F +SG  G     QW+VPIT+      +  K  +L +K +           + K      W+KLN+   GFYR +Y   +   L   I    L   DR G+ +D F+L  A   +   +L +M ++  E  YTV S+L   S  +G ++   +  +  + +++F   +F    E+LGWD KPGE HLDALLRG +   L
Sbjct:  503 GFPLIYVEAEQVEDDRVLKLSQKKFCASGPYGGEDCPQWMVPITISTSEDPNQAKLKILMDKPEM--------SVVLKNVKPDQWVKLNLGTVGFYRTQYSSAMLESLLPGIRDLSLPPVDRLGLQNDLFSLARAGIISTVEVLKVMEAFVNEPNYTVWSDL---SCNLGILSTLLSHTDFYEEIQEFVKDVFSPIGERLGWDPKPGEGHLDALLRGLVLGKL 714          
BLAST of CX295392 vs. ExPASy Swiss-Prot
Match: PSA_HUMAN (Puromycin-sensitive aminopeptidase OS=Homo sapiens GN=NPEPPS PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19
Identity = 67/222 (30.18%), Postives = 106/222 (47.75%), Query Frame = 1
Query:   25 GYPVISVKVREEK----LELEQSQFLSSGS-PGDG--QWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEKKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAA-DARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTAL 666
            G+P+I V+  + +    L L Q +F + GS  G+   QW+VPIT+            +       ++       + K      W+KLN+   GFYR +Y   +   L   I    L   DR G+ +D F+L  A   +   +L +M ++  E  YTV S+L   S  +G ++   +  +  + +++F   +F    E+LGWD KPGE HLDALLRG +   L
Sbjct:  502 GFPLIYVEAEQVEDDRLLRLSQKKFCAGGSYVGEDCPQWMVPITISTSEDPNQAKLKILMDKPEMNV-------VLKNVKPDQWVKLNLGTVGFYRTQYSSAMLESLLPGIRDLSLPPVDRLGLQNDLFSLARAGIISTVEVLKVMEAFVNEPNYTVWSDL---SCNLGILSTLLSHTDFYEEIQEFVKDVFSPIGERLGWDPKPGEGHLDALLRGLVLGKL 713          
BLAST of CX295392 vs. ExPASy Swiss-Prot
Match: APE2_SULTO (Probable aminopeptidase 2 OS=Sulfolobus tokodaii GN=ape2 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.482e-14
Identity = 52/180 (28.89%), Postives = 91/180 (50.56%), Query Frame = 1
Query:   13 IRHEGYPVISVKVREEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEKKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYL 552
            I  +GYPV+ V V   K+ LEQ +F   G+  +  + VP+TL      +   +LL  + DS DI           G +   IK+N+++TGFYRV Y+ DL+      +   +LS  D++G+ +D+F   +A +   T+  ++   + ++  Y V+  L++  Y + R+  D    L + L
Sbjct:  418 ITKDGYPVVYVSVNGSKINLEQERFYLKGNGKNAVYKVPLTLEVNGRKI--TYLLEKEKDSIDI-----------GSDIKSIKVNIDRTGFYRVYYN-DLS-----LVFNSKLSHLDKWGLFNDYFNFFLAGRVNYTTYESIAKQFMKDDNYLVVDELVSELYYLWRVNRDKYKLLYEVL 578          
BLAST of CX295392 vs. ExPASy Swiss-Prot
Match: TRF2_THEAC (Tricorn protease-interacting factor F2 OS=Thermoplasma acidophilum GN=trf2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12
Identity = 57/222 (25.68%), Postives = 104/222 (46.85%), Query Frame = 1
Query:   13 IRHEGYPVISVKVREEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEKKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNL---ITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALA 669
            I++ GYPV+SV     K  L Q QF   G+ G G+W +P+T+   S    K  +L    +S +I+++              +K+NVN +GFYRV YD +    +     K  LS  DR+G++ D +A  ++ + ++   L  +  + E++++ ++  +   +T  Y +   +   R     YL +  ++L          D + GE    + +RG +   LA
Sbjct:  417 IKNPGYPVVSVVKSGNKFRLTQEQFFLDGTRGQGKWPIPLTVMTKS---GKKAML--MEESAEIEDM--------------VKVNVNSSGFYRVSYDGESFETVMKNYSK--LSNLDRWGLISDLYAFLISGRVSVDDYLARIKGFFEDSDHLIVEEIASQLTGLYLLKPDSNRIRETAASYLSRQVVAL---------GDKQKGEDDKISKIRGIVTQDLA 608          
BLAST of CX295392 vs. ExPASy Swiss-Prot
Match: AAP1_YEAST (Alanine/arginine aminopeptidase OS=Saccharomyces cerevisiae GN=AAP1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12
Identity = 57/216 (26.39%), Postives = 102/216 (47.22%), Query Frame = 1
Query:   25 GYPVISVKVREEKLELEQSQFLSSGSPGDGQ--WIVPITLCCGSYDVCKNFLLYN-KSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEKKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTA 663
            G+PV+SVK  + K+ L Q ++LS+G   + +   I PI L         N L+ N KS +F++K            N  + K+N +Q+G +   Y  +  A+L  + +   LS  DR G++ D  AL  +   + T+ L L++++  E  + V   +I     +         ++L+ L +F + L  N   +LGW+    +S     L+  +F+A
Sbjct:  450 GFPVLSVKEHKNKITLTQHRYLSTGDVKEEEDTTIYPILLALKDSTGIDNTLVLNEKSATFELK------------NEEFFKINGDQSGIFITSYSDERWAKL--SKQANLLSVEDRVGLVADAKALSASGYTSTTNFLNLISNWKNEDSFVVWEQIINSLSALKSTWVFEPEDILNALDKFTLDLVLNKLSELGWNIGEDDSFAIQRLKVTLFSA 651          
BLAST of CX295392 vs. ExPASy Swiss-Prot
Match: TRF2_THEVO (Tricorn protease-interacting factor F2 OS=Thermoplasma volcanium GN=trf2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11
Identity = 56/221 (25.34%), Postives = 99/221 (44.80%), Query Frame = 1
Query:   13 IRHEGYPVISVKVREEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEKKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNL---ITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTAL 666
            I   GYPV+ V     ++ L Q QF   G+ G+ +W +P+T+        K  +     D   I E+L              KLN N +GFYRV YD D    +  +++K   S  D++G+L+D +A  ++ + ++   +  + ++  + ++ V+  +   +T  Y I   +        DYL+        N  ++LG   K GE    + LRG ++  L
Sbjct:  417 ITKAGYPVLKVNKDGNRIRLTQEQFYLDGTSGNTEWPIPLTII-----TKKGKVSMLMEDEVYIDEML--------------KLNANNSGFYRVMYDNDTFNTVISSLDK--FSNLDKWGLLNDMYAFLVSGRLSVNEYVERIKNFLNDEDHLVVEEIASQLTSLYLIKPSSQVVYQLAKDYLR--------NQVQRLG-TKKKGEDDKISKLRGIVYQDL 607          
The following BLAST results are available for this feature:
BLAST of CX295392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PSA_MOUSE3.136e-2031.39Puromycin-sensitive aminopeptidase OS=Mus musculus... [more]
PSA_HUMAN2.655e-1930.18Puromycin-sensitive aminopeptidase OS=Homo sapiens... [more]
APE2_SULTO7.482e-1428.89Probable aminopeptidase 2 OS=Sulfolobus tokodaii G... [more]
TRF2_THEAC3.143e-1225.68Tricorn protease-interacting factor F2 OS=Thermopl... [more]
AAP1_YEAST4.105e-1226.39Alanine/arginine aminopeptidase OS=Saccharomyces c... [more]
TRF2_THEVO3.475e-1125.34Tricorn protease-interacting factor F2 OS=Thermopl... [more]
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Properties
Property NameValue
Genbank descriptionC05071G02SK PhIFruit1 Citrus clementina cDNA clone C05071G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295392 ID=CX295392; Name=CX295392; organism=Citrus clementina; type=EST; length=671bp
GCCTCGTGCCGAATTCGGCACGAGGGTTATCCAGTCATCTCTGTAAAAGT
CAGAGAAGAGAAACTAGAACTTGAACAGTCACAATTCTTGTCAAGTGGTT
CCCCTGGGGATGGACAATGGATTGTTCCAATAACATTGTGCTGTGGCTCG
TATGATGTGTGCAAGAATTTCTTATTGTATAATAAGTCTGATTCTTTTGA
TATCAAGGAGTTACTGGGTTGTTCAATTAGTAAAGAAGGTGATAATGGGG
GTTGGATAAAATTGAATGTGAATCAGACTGGTTTCTACAGAGTGAAATAC
GATAAGGACCTTGCAGCTAGGCTTGGATATGCAATAGAGAAGAAACAGTT
ATCTGAAACTGACAGATTTGGTATTTTGGACGATCATTTTGCCCTTTGTA
TGGCTCGCCAGCAGACTTTGACATCTTTGCTTACCTTGATGGCCTCTTAT
AGCGAGGAAACTGAATATACTGTTCTATCAAACTTGATTACTATAAGCTA
TAAAATTGGGAGGATAGCAGCTGATGCGAGACCTGAATTACTGGACTACC
TTAAACAATTTTTCATCAGCCTCTTTCAGAATTCTGCTGAGAAGCTTGGT
TGGGATTCTAAACCAGGTGAAAGTCATTTGGATGCATTGTTGAGAGGAGA
AATTTTCACTGCCCTTGCTTT
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