CX295516

Overview
NameCX295516
Unique NameCX295516
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: P5CS_SOLLC (Delta-1-pyrroline-5-carboxylate synthetase OS=Solanum lycopersicum GN=PRO2 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.622e-62
Identity = 122/174 (70.11%), Postives = 137/174 (78.74%), Query Frame = 3
Query:  144 DHTRDFLKNXXXXXXXXXXXXXXXSDXXXXXXXXXXXXEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDS 665
            D TR F+KN               +D            EQL+ELNSQG+E+ILV+SGAVGVGRQRLRYRKL+NSS  DLQKPQ ELDGKACAAVGQ+ LMALYD+LFSQLDVTS+QLLVTD+DFRD DFR+QL DTV SLL L+VIPIFNENDA+STR+APYEDSSGIFWDNDS
Sbjct:    5 DSTRAFVKNVKRLIVKVGTAVVTRADGRLALGRLGALCEQLQELNSQGYEVILVTSGAVGVGRQRLRYRKLLNSSFLDLQKPQTELDGKACAAVGQNGLMALYDSLFSQLDVTSAQLLVTDNDFRDPDFRRQLNDTVNSLLSLKVIPIFNENDAISTRRAPYEDSSGIFWDNDS 178          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: P5CS_ACTDE (Delta-1-pyrroline-5-carboxylate synthetase OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.766e-62
Identity = 123/174 (70.69%), Postives = 138/174 (79.31%), Query Frame = 3
Query:  144 DHTRDFLKNXXXXXXXXXXXXXXXSDXXXXXXXXXXXXEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDS 665
            D TR F+K                +D            EQ+ ELNSQGFE+ILV+SGAVGVGRQRLRYRKLVNSS ADLQKPQ ELDGKACAAVGQ+ L+ALYDTLFSQLDVTS+QLLVTD+DFRD +FRKQL +TV+SLL+L+VIPIFNENDAVSTRKAPYED+SGIFWDNDS
Sbjct:    5 DSTRAFVKGVKRVIIKVGTAVVTRADGRLALGRLGALCEQIHELNSQGFEVILVTSGAVGVGRQRLRYRKLVNSSFADLQKPQIELDGKACAAVGQNGLLALYDTLFSQLDVTSAQLLVTDNDFRDPEFRKQLTETVESLLNLKVIPIFNENDAVSTRKAPYEDASGIFWDNDS 178          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: P5CS_VIGAC (Delta-1-pyrroline-5-carboxylate synthetase OS=Vigna aconitifolia PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.373e-61
Identity = 121/179 (67.60%), Postives = 141/179 (78.77%), Query Frame = 3
Query:  129 MESFQDHTRDFLKNXXXXXXXXXXXXXXXSDXXXXXXXXXXXXEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDS 665
            MES  D +R F+K+                +            EQ+K+LNS G++IILVSSG VG+GRQRLR+RKL+NSS ADLQKPQ ELDGKACAAVGQ+SLMALYDTLF+QLDVTS+QLLVTD+DFRD+DFRKQL +TV+SLL L+VIP+FNENDAVSTRKAPYEDSSGIFWDNDS
Sbjct:    1 MESAVDPSRGFMKDVKRVIIKVGTAVVTREEGRLAVGRLGALCEQIKQLNSLGYDIILVSSGPVGIGRQRLRFRKLINSSFADLQKPQLELDGKACAAVGQNSLMALYDTLFTQLDVTSAQLLVTDNDFRDKDFRKQLTETVKSLLALKVIPVFNENDAVSTRKAPYEDSSGIFWDNDS 179          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: P5CS_ORYSJ (Delta-1-pyrroline-5-carboxylate synthetase OS=Oryza sativa subsp. japonica GN=P5CS PE=2 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 5.768e-60
Identity = 115/136 (84.56%), Postives = 127/136 (93.38%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDS 665
            EQ+KELNS G+E+ILV+SGAVGVGRQRLRYRKLVNSS ADLQKPQ ELDGKACAAVGQS LMALYD LF+QLDV+SSQLLVTDSDF +  FR+QL +TV+SLLDL+VIPIFNENDA+STRKAPYEDSSGIFWDNDS
Sbjct:   43 EQVKELNSLGYEVILVTSGAVGVGRQRLRYRKLVNSSFADLQKPQMELDGKACAAVGQSGLMALYDMLFNQLDVSSSQLLVTDSDFENPKFREQLTETVESLLDLKVIPIFNENDAISTRKAPYEDSSGIFWDNDS 178          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: P5CS1_ARATH (Delta-1-pyrroline-5-carboxylate synthetase A OS=Arabidopsis thaliana GN=P5CSA PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 9.840e-60
Identity = 112/136 (82.35%), Postives = 126/136 (92.65%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDS 665
            EQL ELNS GFE+ILVSSGAVG+GRQRLRYR+LVNSS ADLQKPQ ELDGKACA VGQSSLMA Y+T+F QLDVT++QLLV DS FRD+DFRKQL +TV+S+LDLRVIPIFNENDA+STR+APY+DSSGIFWDNDS
Sbjct:   43 EQLAELNSDGFEVILVSSGAVGLGRQRLRYRQLVNSSFADLQKPQTELDGKACAGVGQSSLMAYYETMFDQLDVTAAQLLVNDSSFRDKDFRKQLNETVKSMLDLRVIPIFNENDAISTRRAPYQDSSGIFWDNDS 178          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: P5CS_MESCR (Delta-1-pyrroline-5-carboxylate synthetase OS=Mesembryanthemum crystallinum GN=P5CS PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.378e-59
Identity = 117/174 (67.24%), Postives = 132/174 (75.86%), Query Frame = 3
Query:  144 DHTRDFLKNXXXXXXXXXXXXXXXSDXXXXXXXXXXXXEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDS 665
            D TR F+K+               SD            EQLKELNS G+E+ILV+SGAV  GRQRLR+RKLVNSS ADLQKPQ ELDGKACAAVGQ+ LMALYDTLFSQLD+T++QLLVTD+DFRD  FR QL +TV  LLDL+V+P+ NENDAVSTRKAPYEDSSGIFWDNDS
Sbjct:    2 DATRAFVKDVKRVVVKVGTAVVTRSDGRLALGRLGSLCEQLKELNSDGYEVILVTSGAVSAGRQRLRFRKLVNSSFADLQKPQVELDGKACAAVGQNGLMALYDTLFSQLDLTAAQLLVTDNDFRDPSFRTQLTETVYQLLDLKVVPVLNENDAVSTRKAPYEDSSGIFWDNDS 175          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: P5CS2_ARATH (Delta-1-pyrroline-5-carboxylate synthetase B OS=Arabidopsis thaliana GN=P5CSB PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.052e-57
Identity = 107/136 (78.68%), Postives = 125/136 (91.91%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDS 665
            EQL ELNS GFE+ILVSSGAVG+GRQRLRYR+LVNSS ADLQKPQ ELDGKACA VGQSSLMA Y+T+F QLDVT +Q+LVTDS FRD+DFRKQL +TV+++L +RVIP+FNENDA+STR+APY+DS+GIFWDNDS
Sbjct:   43 EQLAELNSDGFEVILVSSGAVGLGRQRLRYRQLVNSSFADLQKPQMELDGKACAGVGQSSLMAYYETMFDQLDVTVAQMLVTDSSFRDKDFRKQLSETVKAMLRMRVIPVFNENDAISTRRAPYKDSTGIFWDNDS 178          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: P5CS_PONAB (Delta-1-pyrroline-5-carboxylate synthetase OS=Pongo abelii GN=ALDH18A1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24
Identity = 64/149 (42.95%), Postives = 91/149 (61.07%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNEL--------DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI----FWDNDS 665
            EQ+  L +QG E++LV+SGAV  G+QRLR+  L++ S+   L   QN+L        + +ACAA GQS LMALY+ +F+Q  + ++Q+LVT+ DF DE  R+ L  T+  LL + ++PI N NDAV     P  D  G+      DNDS
Sbjct:  100 EQVSVLQNQGREMMLVTSGAVAFGKQRLRHEILLSQSVRQALHSGQNQLKEMAIPVLEARACAAAGQSGLMALYEAMFTQYSICAAQILVTNLDFHDEQKRRNLNGTLHELLRMNIVPIVNTNDAVVPPAEPNSDLQGVNVISVKDNDS 248          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: P5CS_HUMAN (Delta-1-pyrroline-5-carboxylate synthetase OS=Homo sapiens GN=ALDH18A1 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24
Identity = 64/149 (42.95%), Postives = 91/149 (61.07%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNEL--------DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI----FWDNDS 665
            EQ+  L +QG E++LV+SGAV  G+QRLR+  L++ S+   L   QN+L        + +ACAA GQS LMALY+ +F+Q  + ++Q+LVT+ DF DE  R+ L  T+  LL + ++PI N NDAV     P  D  G+      DNDS
Sbjct:  100 EQVSVLQNQGREMMLVTSGAVAFGKQRLRHEILLSQSVRQALHSGQNQLKEMAIPVLEARACAAAGQSGLMALYEAMFTQYSICAAQILVTNLDFHDEQKRRNLNGTLHELLRMNIVPIVNTNDAVVPPAEPNSDLQGVNVISVKDNDS 248          
BLAST of CX295516 vs. ExPASy Swiss-Prot
Match: P5CS_MOUSE (Delta-1-pyrroline-5-carboxylate synthetase OS=Mus musculus GN=Aldh18a1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24
Identity = 64/149 (42.95%), Postives = 90/149 (60.40%), Query Frame = 3
Query:  258 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNEL--------DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI----FWDNDS 665
            EQ+  L +QG E++LV+SGAV  G+QRLR+  L++ S+   L   QN L        + +ACAA GQS LMALY+ +F+Q  + ++Q+LVT+ DF DE  R+ L  T+  LL + ++PI N NDAV     P  D  G+      DNDS
Sbjct:  100 EQVSVLQNQGREMMLVTSGAVAFGKQRLRHEILLSQSVRQALHSGQNHLKEMAIPVLEARACAAAGQSGLMALYEAMFTQYSICAAQILVTNLDFHDEQKRRNLNGTLHELLRMNIVPIVNTNDAVVPPAEPNSDLQGVNVISVKDNDS 248          
The following BLAST results are available for this feature:
BLAST of CX295516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 325
Match NameE-valueIdentityDescription
P5CS_SOLLC1.622e-6270.11Delta-1-pyrroline-5-carboxylate synthetase OS=Sola... [more]
P5CS_ACTDE2.766e-6270.69Delta-1-pyrroline-5-carboxylate synthetase OS=Acti... [more]
P5CS_VIGAC1.373e-6167.60Delta-1-pyrroline-5-carboxylate synthetase OS=Vign... [more]
P5CS_ORYSJ5.768e-6084.56Delta-1-pyrroline-5-carboxylate synthetase OS=Oryz... [more]
P5CS1_ARATH9.840e-6082.35Delta-1-pyrroline-5-carboxylate synthetase A OS=Ar... [more]
P5CS_MESCR6.378e-5967.24Delta-1-pyrroline-5-carboxylate synthetase OS=Mese... [more]
P5CS2_ARATH2.052e-5778.68Delta-1-pyrroline-5-carboxylate synthetase B OS=Ar... [more]
P5CS_PONAB3.905e-2442.95Delta-1-pyrroline-5-carboxylate synthetase OS=Pong... [more]
P5CS_HUMAN3.905e-2442.95Delta-1-pyrroline-5-carboxylate synthetase OS=Homo... [more]
P5CS_MOUSE6.662e-2442.95Delta-1-pyrroline-5-carboxylate synthetase OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionC05073A07SK DroRLeaf1 Citrus clementina cDNA clone C05073A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295516 ID=CX295516; Name=CX295516; organism=Citrus clementina; type=EST; length=703bp
GAGGCTCACCTCTCGCCCACTCGTTATTATTTAAATTTCCGCGAGCAAAA
GATAATTTGCTCCCAAAGTTTTAATTTGCAAAACTCTCTTTTCCTTCTTC
CTCTCCCCCACACAAAAACACACACATGATGGAATCTTTCCAAGATCATA
CTCGTGACTTCCTCAAGAACGTCAAGCGTGTTGTTGTTAAGGTTGGAACA
GCTGTGGTTACTCGAAGTGATGGACGATTAGCTTTGGGAAGGCTTGGAGC
TCTTTTAGAGCAGCTTAAAGAGTTAAATTCTCAAGGCTTTGAGATTATTT
TAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAAAGGCTTAGATACAGA
AAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAAGCCGCAGAATGAGCT
TGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTAGTCTCATGGCTCTTT
ATGATACCTTGTTCAGCCAGCTTGATGTGACCTCATCCCAACTTCTTGTG
ACGGATAGTGATTTTAGGGATGAAGATTTCAGAAAGCAACTCTATGACAC
TGTTCAATCATTGTTAGATTTGAGGGTTATTCCTATTTTTAATGAAAATG
ACGCAGTTAGTACTAGGAAAGCACCATACGAGGATTCTTCTGGTATATTT
TGGGATAATGACAGTCTGGCAGGATTATTGGCTTTGGAACTAAAGCTGAT
CTT
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