CX295540

Overview
NameCX295540
Unique NameCX295540
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length638
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 3.045e-38
Identity = 68/127 (53.54%), Postives = 100/127 (78.74%), Query Frame = 2
Query:   17 NPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRP 397
            N +R+VGTYGYMSPEYA+ G +S+KSDV+SFGV+VLEIISGK+N+ FY ++ A  L+ YAW LW  G+ L+++D  +  + + NE+++C+++GLLCVQEDP +RPT+S +V+ML S  + L  P++P
Sbjct:  495 NTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYAWGLWSNGRPLELVDPAIVENCQRNEVVRCVHIGLLCVQEDPAERPTLSTIVLMLTSNTVTLPVPRQP 621          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.193e-38
Identity = 78/140 (55.71%), Postives = 96/140 (68.57%), Query Frame = 2
Query:   17 NPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKLHAS-------SKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIRR 415
            N  +VVGTYGYMSPEYA+ G FS KSDVFSFGV+VLEI+SGK+N GFYN +    LL Y W  W+EG+AL+++D  +  S        +P E+LKCI +GLLCVQE    RP MS VV M GSEA  +  PK P + +RR
Sbjct:  686 NTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKKNRGFYNLDYENDLLSYVWSRWKEGRALEIVDPVIVDSLSSQPSIFQPQEVLKCIQIGLLCVQELAEHRPAMSSVVWMFGSEATEIPQPKPPGYCVRR 825          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.193e-38
Identity = 72/156 (46.15%), Postives = 108/156 (69.23%), Query Frame = 2
Query:   17 NPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIRRGXXXXXXXXNKPESNNELTNTLE 484
            N +R+VGTYGYMSPEYA+ G FS+KSDV+SFGV+VLEIISG++N  F  ++ A  L+ +AW+LW+ G ALD++D  +  S + +E+++C ++GLLCVQEDP  RP MS + +ML S  M L  P++P F +R          ++  +N  +T +++
Sbjct:  494 NTSRIVGTYGYMSPEYAMRGQFSMKSDVYSFGVLVLEIISGRKNNSFIETDDAQDLVTHAWRLWRNGTALDLVDPFIADSCRKSEVVRCTHIGLLCVQEDPVKRPAMSTISVMLTSNTMALPAPQQPGFFVRSRPGTNRLDSDQSTTNKSVTVSID 649          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.511e-37
Identity = 66/134 (49.25%), Postives = 100/134 (74.63%), Query Frame = 2
Query:   11 RGNPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIR 412
            + N  R+VGTYGYMSPEYA+ G +SVKSDV+SFGV+VLE+I+GK+N+ FY  +    L+ Y WKLW E   L+++D+ +  + + NE+++CI++ LLCVQED ++RP+M D+++M+ S  + L  PKR  F++R
Sbjct:  503 QANTKRIVGTYGYMSPEYAIHGKYSVKSDVYSFGVLVLELITGKKNSSFYEEDGLGDLVTYVWKLWVENSPLELVDEAMRGNFQTNEVIRCIHIALLCVQEDSSERPSMDDILVMMNSFTVTLPIPKRSGFLLR 636          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.279e-36
Identity = 70/132 (53.03%), Postives = 100/132 (75.76%), Query Frame = 2
Query:   17 NPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIR 412
            N +R+VGTYGYM+PEYA+ G FS+KSDV+SFGV+VLEIISG++N+ F  S+ A  LL +AW+LW   KALD++D  +  + + +E+++CI++GLLCVQEDP  RP +S V +ML S  + L  P++P F I+
Sbjct:  509 NTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRKNSSFGESDGAQDLLTHAWRLWTNKKALDLVDPLIAENCQNSEVVRCIHIGLLCVQEDPAKRPAISTVFMMLTSNTVTLPVPRQPGFFIQ 640          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 6.349e-36
Identity = 69/132 (52.27%), Postives = 99/132 (75.00%), Query Frame = 2
Query:   17 NPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIR 412
            N +R+VGTYGYM+PEYA+ G FS+KSDV+SFGV+VLEIISG++N+ F  S+ A  LL + W+LW    ALD++D  +  + + +E+++CI++GLLCVQEDP  RPT+S V +ML S  + L  P++P F I+
Sbjct:  511 NTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRKNSSFDESDGAQDLLTHTWRLWTNRTALDLVDPLIANNCQNSEVVRCIHIGLLCVQEDPAKRPTISTVFMMLTSNTVTLPVPRQPGFFIQ 642          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.083e-35
Identity = 67/132 (50.76%), Postives = 99/132 (75.00%), Query Frame = 2
Query:   17 NPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIR 412
            N +R+VGT+GYM+PEYA+ G FSVKSDV+SFGV+VLEIISGK+N  FY ++ A  L+ +AW+LW  G ALD++D  +  + + +E+++CI++ LLCVQEDP +RP +S + +ML S  + L  P +P F ++
Sbjct:  495 NTSRIVGTFGYMAPEYAIHGQFSVKSDVYSFGVLVLEIISGKKNNSFYETDGAHDLVTHAWRLWSNGTALDLVDPIIIDNCQKSEVVRCIHICLLCVQEDPAERPILSTIFMMLTSNTVTLPVPLQPGFPVQ 626          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.412e-35
Identity = 70/130 (53.85%), Postives = 96/130 (73.85%), Query Frame = 2
Query:   26 RVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQAL-SLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIR 412
            RVVGTYGYMSPEYA+ G FS+KSDV+SFGV+VLEIISG++N+  Y  + +  +L+ Y W+LW +G  LD++D     S + NEI++CI++ LLCVQED  +RPTMS +V ML + ++ LA P+ P F  R
Sbjct:  501 RVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGRKNSSLYQMDASFGNLVTYTWRLWSDGSPLDLVDSSFRDSYQRNEIIRCIHIALLCVQEDTENRPTMSAIVQMLTTSSIALAVPQPPGFFFR 630          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.115e-35
Identity = 70/134 (52.24%), Postives = 96/134 (71.64%), Query Frame = 2
Query:   17 NPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSE--QALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIR 412
            N  R+VGTYGYMSPEYA+ G FS+KSDV+SFGV+VLEIISGK+N+  Y  +   A +L+ Y W+LW  G  L+++D     + + NE+ +CI++ LLCVQE+  DRPTMS +V ML + ++ LA P+RP F  R
Sbjct:  509 NTRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGSPLELVDPSFRDNYRINEVSRCIHIALLCVQEEAEDRPTMSAIVQMLTTSSIALAVPQRPGFFFR 642          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.667e-34
Identity = 64/132 (48.48%), Postives = 98/132 (74.24%), Query Frame = 2
Query:   11 RGNPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQA-LSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF 403
            R +  RVVGT+GY+SPEY + G FSVKSDV+SFGV+VLEIISGKRN+ F+ ++++  +L+ YAW+ W+ G  L+++D +L  + + NE+ +CI++ LLCVQ DP  RP +S +++ML S ++ L  P+ P +
Sbjct:  477 RADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKRNSNFHETDESGKNLVTYAWRHWRNGSPLELVDSELEKNYQSNEVFRCIHIALLCVQNDPEQRPNLSTIIMMLTSNSITLPVPQSPVY 608          
The following BLAST results are available for this feature:
BLAST of CX295540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
CRK10_ARATH3.045e-3853.54Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
SRK6_BRAOE5.193e-3855.71Putative serine/threonine-protein kinase receptor ... [more]
CRK7_ARATH5.193e-3846.15Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
CRK25_ARATH1.511e-3749.25Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRK6_ARATH1.279e-3653.03Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
CRK8_ARATH6.349e-3652.27Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK15_ARATH1.083e-3550.76Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
CRK5_ARATH2.412e-3553.85Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK4_ARATH4.115e-3552.24Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK33_ARATH2.667e-3448.48Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC05073C09SK DroRLeaf1 Citrus clementina cDNA clone C05073C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295540 ID=CX295540; Name=CX295540; organism=Citrus clementina; type=EST; length=638bp
GATTCGGCCGAGGGGGAACCCAAATCGAGTGGTTGGAACTTATGGCTATA
TGTCTCCAGAGTATGCATTAGATGGATTTTTCTCAGTCAAGTCCGATGTT
TTCAGCTTTGGCGTAGTTGTGCTTGAGATTATCAGTGGAAAAAGAAACAC
TGGATTTTATAATTCAGAACAAGCTTTGAGCCTTCTAGGTTACGCGTGGA
AATTGTGGCAAGAAGGCAAGGCATTAGATATGATGGATCAGAAACTACAT
GCCAGCTCCAAACCAAATGAAATCTTAAAGTGCATAAATGTTGGGCTCTT
ATGTGTGCAGGAAGATCCAAACGATCGTCCCACGATGTCTGATGTTGTTA
TCATGCTTGGCAGTGAAGCTATGAACCTTGCAACTCCTAAACGACCAGCC
TTTGTCATCAGGAGAGGATCTTCTAGCTCGGCATCTTCTTCTAATAAACC
AGAATCAAACAACGAACTAACAAATACTTTAGAATGTAGATAATCAGGGA
GAATTCTTAATAAGTTTGTCCTCCTTTTGTTAATCCTGCACAATCAGCTT
ATTGTACATCATCAAATGTTGGTTCTTATATCAGAAGTTGCCTGCTATGT
ATCCTTTATTATTAGGTACTTCTCTTCAGGAAAAAAAA
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