CX295543

Overview
NameCX295543
Unique NameCX295543
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length621
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1030 contig Ccv1_Contig1030:35..655. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295543 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.842e-31
Identity = 74/199 (37.19%), Postives = 114/199 (57.29%), Query Frame = 1
Query:   25 ATTLSFLILALASNSLLVLGTSSVPEPLLDVHGNKVESTLKYYIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYNNST-IVRESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCNNVGR-SFEDGVRRLVL 612
            AT +  L+ A  S S      ++   P+LD  G+++++ ++YY++S+I                 CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YK   CPSVC+SC  LC+++GR S +DG  RL L
Sbjct:    4 ATAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG--YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
BLAST of CX295543 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 1.489e-26
Identity = 72/203 (35.47%), Postives = 106/203 (52.22%), Query Frame = 1
Query:   16 ISLATTLSFLILALASNSLLVLGTSSVPEPLLDVHGNKVESTLKYYIVSAI--WXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCNNVGRSFED-GVRRLVL 612
            +SL+      +LA A+N LL     S P P+LD+ G K+ +   YYIV  +                   CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK+V CP+VC SC   C +VG   +  G RRL L
Sbjct:    7 LSLSFFFVSALLAAAANPLLS-AADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLAL 205          
BLAST of CX295543 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.082e-20
Identity = 65/179 (36.31%), Postives = 92/179 (51.40%), Query Frame = 1
Query:   97 PEPLLDVHGNKVESTLKYYIVSAIWXXXXXXXXXXXXXXXY-CPLDVIQLPSDMQNGIELTLSPYNN--STIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCNNVGRSFED-GVRRLVLVRD 621
            P+P++D+ G  V   + Y++VSAIW                 CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K G  P  YK   CPS   + +  CNNV   F+   +RRL+L  D
Sbjct:    3 PKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG-LPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173          
BLAST of CX295543 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.932e-12
Identity = 53/172 (30.81%), Postives = 82/172 (47.67%), Query Frame = 1
Query:  100 EPLLDVHGNKVESTLKYYIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLS-PYNNSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCNNVGRSFEDGVRRLVL 612
            E + D+ G  V    +YYIVSAI                 CP+ +IQ  SD+Q G+ +  S P  +   +   T+L + F      +  C E   W +      SG+  +  GG + HP  E +  +FK+EK+G+    YK+V CP   +S    C+++G ++E G R LVL
Sbjct:    4 EKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEFVE----KPDCAESSKWVIVK---DSGEARVAIGGSEDHPQGELVRGFFKIEKLGSL--AYKLVFCP---KSSSGSCSDIGINYE-GRRSLVL 162          
BLAST of CX295543 vs. ExPASy Swiss-Prot
Match: SPORB_IPOBA (Sporamin B OS=Ipomoea batatas GN=GSPO-B1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.036e-11
Identity = 52/171 (30.41%), Postives = 80/171 (46.78%), Query Frame = 1
Query:   85 TSSVPEPLLDVHGNKVESTLKYYIVSAIW--XXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCNNVGRSFE 588
            T+S   P+LD++G++V +   YYIVSAIW                  C  DVI   SD  NG  +T++P +  +T+V  ST    RF++  +    C     W +  +D+ SG++F+  G            N FK+E + +    YKI +C    E C     NVGR ++
Sbjct:   34 TASSETPVLDINGDEVRAGENYYIVSAIWGAGGGGLRLVRLDSSSNECASDVIVSRSDFDNGDPITITPADPEATVVMPSTYQTFRFNI--ATNKLCVNNVNWGI-KHDSESGQYFVKAGEF-----VSDNSNQFKIEVVNDNLNAYKISYCQFGTEKCF----NVGRYYD 192          
BLAST of CX295543 vs. ExPASy Swiss-Prot
Match: SPOR2_IPOBA (Sporamin B OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.308e-11
Identity = 51/171 (29.82%), Postives = 80/171 (46.78%), Query Frame = 1
Query:   85 TSSVPEPLLDVHGNKVESTLKYYIVSAIW--XXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCNNVGRSFE 588
            T+S   P+LD++G++V +   YY+VSAIW                  C  DVI   SD  NG  +T++P +  +T+V  ST    RF++  +    C     W +  +D+ SG++F+  G            N FK+E + +    YKI +C    E C     NVGR ++
Sbjct:   34 TASSETPVLDINGDEVRAGENYYMVSAIWGAGGGGLRLVRLDSSSNECASDVIVSRSDFDNGDPITITPADPEATVVMPSTYQTFRFNI--ATNKLCVNNVNWGI-KHDSESGQYFVKAGEF-----VSDNSNQFKIEVVNDNLNAYKISYCQFGTEKCF----NVGRYYD 192          
BLAST of CX295543 vs. ExPASy Swiss-Prot
Match: SPOR1_IPOBA (Sporamin A OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.014e-11
Identity = 53/176 (30.11%), Postives = 82/176 (46.59%), Query Frame = 1
Query:   88 SSVPEPLLDVHGNKVESTLKYYIVSAIW-XXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN---NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCNNVGRSFEDGVRR 603
            +S   P+LD++G++V +   YY+VSAIW                 C  DVI  P+D+ NG  +T++P      ST+V  ST    RF++  +    C     W +  +D+ASG++F+  G            N FK+E +      YK+ +C    + C     NVGR F D + R
Sbjct:   37 ASSETPVLDINGDEVRAGGNYYMVSAIWGAGGGGLRLAHLDMMSKCATDVIVSPNDLDNGDPITITPATADPESTVVMASTYQTFRFNI--ATNKLCVNNVNWGI-QHDSASGQYFLKAGEF-----VSDNSNQFKIELVDANLNSYKLTYCQFGSDKCY----NVGR-FHDHMLR 199          
The following BLAST results are available for this feature:
BLAST of CX295543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ASP_THECC5.842e-3137.1921 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU1.489e-2635.47Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA2.082e-2036.31Latex serine proteinase inhibitor OS=Carica papaya... [more]
DRTI_DELRE7.932e-1230.81Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
SPORB_IPOBA1.036e-1130.41Sporamin B OS=Ipomoea batatas GN=GSPO-B1 PE=2 SV=1[more]
SPOR2_IPOBA2.308e-1129.82Sporamin B OS=Ipomoea batatas PE=2 SV=1[more]
SPOR1_IPOBA3.014e-1130.11Sporamin A OS=Ipomoea batatas PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionC05073C12SK DroRLeaf1 Citrus clementina cDNA clone C05073C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295543 ID=CX295543; Name=CX295543; organism=Citrus clementina; type=EST; length=621bp
AACAACAAAATGAAGATTTCATTAGCAACAACACTCTCTTTCCTTATCCT
TGCCTTGGCCTCAAACTCTTTGTTGGTCTTGGGCACCTCATCAGTTCCTG
AACCTCTCCTTGATGTCCACGGAAACAAGGTCGAATCCACCCTTAAGTAC
TACATAGTCTCAGCCATCTGGGGAGCTGGCGGTGGTGGAGTTAGCCTACA
CGGTGGCAGAAACGGATATTGTCCGCTGGACGTTATCCAGTTACCTTCTG
ATATGCAAAATGGAATCGAATTAACACTGTCACCGTATAACAATTCTACA
ATTGTCCGAGAATCCACTGATCTCAACTTGAGATTCTCAGTGTTGCTATC
TGGACGTGACTATTGTAACGAACAACCGTTGTGGAAAGTTGATAATTATG
ACGCGGCATCAGGCAAATGGTTTATAACAACCGGGGGACTTGATGGTCAC
CCTGGAGCTGAAACTTTGCTAAATTGGTTTAAGCTTGAGAAAATTGGAAA
TTTTCCAGGTATATACAAAATCGTTCATTGTCCATCCGTTTGCGAGTCTT
GTGTCAAACTCTGCAACAACGTTGGCCGTTCGTTTGAGGATGGCGTTCGA
CGTCTGGTTCTGGTTCGTGAT
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