CX295583
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295583 vs. ExPASy Swiss-Prot
Match: PSAK_MEDSA (Photosystem I reaction center subunit psaK, chloroplastic OS=Medicago sativa GN=PSAK PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.211e-42 Identity = 89/109 (81.65%), Postives = 96/109 (88.07%), Query Frame = 1 Query: 40 MATSLMT-MPQFSGLRPQISAAPAQSLVAAQPM-RRKCSGALGARCGFIGSPTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLAC 360 MATS+MT +PQF+GLRPQ+ +P Q LVAAQPM RRK GALG RC FIGS TN+IMV +TTLMLFAGRFGLAPSANRKATAGLKLE RDSGLQTGDPAGFTLADTLAC Sbjct: 1 MATSMMTTLPQFTGLRPQLKPSPIQGLVAAQPMTRRKGKGALGVRCDFIGSSTNVIMVASTTLMLFAGRFGLAPSANRKATAGLKLETRDSGLQTGDPAGFTLADTLAC 109
BLAST of CX295583 vs. ExPASy Swiss-Prot
Match: PSAK_ARATH (Photosystem I reaction center subunit psaK, chloroplastic OS=Arabidopsis thaliana GN=PSAK PE=2 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 2.718e-41 Identity = 85/107 (79.44%), Postives = 95/107 (88.79%), Query Frame = 1 Query: 43 ATSLMTMPQFSGLRP-QISAAPAQSLVAAQPMRRKCSGALGARCGFIGSPTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLAC 360 +T + T+PQF+GLR +ISAAP Q L + QPMRRK +GALGA+C FIGS TNLIMVT+TTLMLFAGRFGLAPSANRKATAGL+LE RDSGLQTGDPAGFTLADTLAC Sbjct: 3 STMMTTLPQFNGLRATKISAAPVQGLASVQPMRRKGNGALGAKCDFIGSSTNLIMVTSTTLMLFAGRFGLAPSANRKATAGLRLEARDSGLQTGDPAGFTLADTLAC 109
BLAST of CX295583 vs. ExPASy Swiss-Prot
Match: PSAK_HORVU (Photosystem I reaction center subunit psaK, chloroplastic OS=Hordeum vulgare GN=PSAK PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.350e-31 Identity = 72/105 (68.57%), Postives = 83/105 (79.05%), Query Frame = 1 Query: 46 TSLMTMPQFSGLRPQISAAPAQSLVAAQPMRRKCSGALGARCGFIGSPTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLAC 360 +++ ++PQF GLR S +S+ +RR+ S G RC +IGS TNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLE R+SGLQTGDPAGFTLADTLAC Sbjct: 6 SAMTSVPQFHGLRTYSSP---RSMATLPSLRRRRSQ--GIRCDYIGSSTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLEARESGLQTGDPAGFTLADTLAC 105
BLAST of CX295583 vs. ExPASy Swiss-Prot
Match: PSAK_CHLRE (Photosystem I reaction center subunit psaK, chloroplastic OS=Chlamydomonas reinhardtii GN=PSAK PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.906e-12 Identity = 37/64 (57.81%), Postives = 44/64 (68.75%), Query Frame = 1 Query: 172 GFIGSPTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKL--EVRDSGLQTGDPAGFTLADTLA 357 GFIGS TNLIMV +TT L A RFGLAP+ + TAGLKL +G+ + DPAGFT+ D LA Sbjct: 28 GFIGSSTNLIMVASTTATLAAARFGLAPTVKKNTTAGLKLVDSKNSAGVISNDPAGFTIVDVLA 91 The following BLAST results are available for this feature:
BLAST of CX295583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295583 ID=CX295583; Name=CX295583; organism=Citrus clementina; type=EST; length=609bpback to top |