CX295603

Overview
NameCX295603
Unique NameCX295603
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length731
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX295603 vs. ExPASy Swiss-Prot
Match: SPOP_XENTR (Speckle-type POZ protein OS=Xenopus tropicalis GN=spop PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.299e-14
Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 2 
Query:  395 SRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLI 712
            +RSPVF AM ++EMEES+   ++I DV  D  +  + ++YT +A   +++A DLL  A+KY ++ LK  CE+ L S L+ +N+      A  H+A QL   A+  I
Sbjct:  220 ARSPVFSAMFEHEMEESKKNRVEIKDVEPDVFKEMMCFIYTGKASNLDKMADDLLAAADKYALERLKVMCEEALCSNLSVENAAEILILADLHSADQLKTQAVDFI 325
[Close]
BLAST of CX295603 vs. ExPASy Swiss-Prot
Match: SPOPB_XENLA (Speckle-type POZ protein B OS=Xenopus laevis GN=spop-B PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.299e-14
Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 2 
Query:  395 SRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLI 712
            +RSPVF AM ++EMEES+   ++I DV  D  +  + ++YT +A   +++A DLL  A+KY ++ LK  CE+ L S L+ +N+      A  H+A QL   A+  I
Sbjct:  220 ARSPVFSAMFEHEMEESKKNRVEIKDVEPDVFKEMMCFIYTGKASNLDKMADDLLAAADKYALERLKVMCEEALCSNLSVENAAEILILADLHSADQLKTQAVDFI 325
[Close]
BLAST of CX295603 vs. ExPASy Swiss-Prot
Match: SPOPA_XENLA (Speckle-type POZ protein A OS=Xenopus laevis GN=spop-A PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.299e-14
Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 2 
Query:  395 SRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLI 712
            +RSPVF AM ++EMEES+   ++I DV  D  +  + ++YT +A   +++A DLL  A+KY ++ LK  CE+ L S L+ +N+      A  H+A QL   A+  I
Sbjct:  220 ARSPVFSAMFEHEMEESKKNRVEIKDVEPDVFKEMMCFIYTGKASNLDKMADDLLAAADKYALERLKVMCEEALCSNLSVENAAEILILADLHSADQLKTQAVDFI 325
[Close]
BLAST of CX295603 vs. ExPASy Swiss-Prot
Match: SPOLA_DANRE (Speckle-type POZ protein-like A OS=Danio rerio GN=spopla PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.737e-14
Identity = 40/106 (37.74%), Postives = 63/106 (59.43%), Query Frame = 2 
Query:  395 SRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLI 712
            +RSPVF AM ++EMEES+   + ISDV  +  +  + ++YT +A   E++A  LL  A+KY ++ LK  CE+ L + L+ +N       A  H+A+QL   A+  I
Sbjct:  220 ARSPVFNAMFEHEMEESKKNRVDISDVEPEVFKEMMGFIYTGKAPNLEKMADSLLAAADKYALERLKVMCEEALCNSLSVENVADTLILADLHSAEQLKAQAIDFI 325
[Close]
BLAST of CX295603 vs. ExPASy Swiss-Prot
Match: SPOP_PONAB (Speckle-type POZ protein OS=Pongo abelii GN=SPOP PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.490e-13
Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = 2 
Query:  395 SRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLI 712
            +RSPVF AM ++EMEES+   ++I+DV  +  +  + ++YT +A   +++A DLL  A+KY ++ LK  CE  L S L+ +N+      A  H+A QL   A+  I
Sbjct:  220 ARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFI 325
[Close]
BLAST of CX295603 vs. ExPASy Swiss-Prot
Match: SPOP_MOUSE (Speckle-type POZ protein OS=Mus musculus GN=Spop PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.490e-13
Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = 2 
Query:  395 SRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLI 712
            +RSPVF AM ++EMEES+   ++I+DV  +  +  + ++YT +A   +++A DLL  A+KY ++ LK  CE  L S L+ +N+      A  H+A QL   A+  I
Sbjct:  220 ARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFI 325
[Close]
BLAST of CX295603 vs. ExPASy Swiss-Prot
Match: SPOP_HUMAN (Speckle-type POZ protein OS=Homo sapiens GN=SPOP PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.490e-13
Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = 2 
Query:  395 SRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLI 712
            +RSPVF AM ++EMEES+   ++I+DV  +  +  + ++YT +A   +++A DLL  A+KY ++ LK  CE  L S L+ +N+      A  H+A QL   A+  I
Sbjct:  220 ARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFI 325
[Close]
BLAST of CX295603 vs. ExPASy Swiss-Prot
Match: SPOP_BOVIN (Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.490e-13
Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = 2 
Query:  395 SRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLI 712
            +RSPVF AM ++EMEES+   ++I+DV  +  +  + ++YT +A   +++A DLL  A+KY ++ LK  CE  L S L+ +N+      A  H+A QL   A+  I
Sbjct:  220 ARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFI 325
[Close]
BLAST of CX295603 vs. ExPASy Swiss-Prot
Match: SPOLB_DANRE (Speckle-type POZ protein-like B OS=Danio rerio GN=spoplb PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.490e-13
Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 2 
Query:  395 SRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLI 712
            +RSPVF AM +++MEES+   + ISDV  D  R  + ++YT +A   E++A +LL  A+KY ++ LK  CE+ L + L+ +N       A  H+A+QL   A+  I
Sbjct:  220 ARSPVFNAMFEHKMEESKKNRVDISDVEPDVFREMMVFIYTGKAPNLEKMADNLLAAADKYALERLKVLCEEALCNSLSVENVADVLILADLHSAEQLKAQAIDFI 325
[Close]
BLAST of CX295603 vs. ExPASy Swiss-Prot
Match: SPOPL_HUMAN (Speckle-type POZ protein-like OS=Homo sapiens GN=SPOPL PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.947e-13
Identity = 38/106 (35.85%), Postives = 64/106 (60.38%), Query Frame = 2 
Query:  395 SRSPVFKAMLDNEMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDEQLACDLLELAEKYQVKHLKAYCEKFLVSKLNWDNSVVNYAFAHQHNAKQLLEAALSLI 712
            +RSPVF AM ++EMEES+   ++I+D+  +  +  + ++YT  A   +++A +LL  A+KY ++ LK  CE+ L S L+ +N       A  H+A+QL   A+  I
Sbjct:  220 ARSPVFNAMFEHEMEESKKNRVEINDLDPEVFKEMMRFIYTGRAPNLDKMADNLLAAADKYALERLKVMCEEALCSNLSVENVADTLVLADLHSAEQLKAQAIDFI 325
The following BLAST results are available for this feature:
BLAST of CX295603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
SPOP_XENTR2.299e-1438.68Speckle-type POZ protein OS=Xenopus tropicalis GN=... [more]
SPOPB_XENLA2.299e-1438.68Speckle-type POZ protein B OS=Xenopus laevis GN=sp... [more]
SPOPA_XENLA2.299e-1438.68Speckle-type POZ protein A OS=Xenopus laevis GN=sp... [more]
SPOLA_DANRE8.737e-1437.74Speckle-type POZ protein-like A OS=Danio rerio GN=... [more]
SPOP_PONAB1.490e-1337.74Speckle-type POZ protein OS=Pongo abelii GN=SPOP P... [more]
SPOP_MOUSE1.490e-1337.74Speckle-type POZ protein OS=Mus musculus GN=Spop P... [more]
SPOP_HUMAN1.490e-1337.74Speckle-type POZ protein OS=Homo sapiens GN=SPOP P... [more]
SPOP_BOVIN1.490e-1337.74Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=... [more]
SPOLB_DANRE1.490e-1338.68Speckle-type POZ protein-like B OS=Danio rerio GN=... [more]
SPOPL_HUMAN1.947e-1335.85Speckle-type POZ protein-like OS=Homo sapiens GN=S... [more]

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Properties
Property NameValue
Genbank descriptionC05073H12SK DroRLeaf1 Citrus clementina cDNA clone C05073H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295603 ID=CX295603; Name=CX295603; organism=Citrus clementina; type=EST; length=731bp
ACTCTAAGGGGAAAAAAAGATGCGGGGACGTCGGTGCCACTCGACTCGCC
ACCCAGACATGTCGGGTACGGATTCGGAATCCGAAGCCGAATCCGAAACG
ATGCGTTGCATCTCCTGCAGGGAGGAGTACGGGACCCGGGACGCGGGCAC
ATGCAAGGAGTGTTACGAGGAGGCGAGCGAGACGGAGGAGGAGCTGAAGC
GAGAAATCGAAGATCTTAAAGCTAAAGTCGCCTTTTTAAGGTTTTGGTCT
CCACTCGATCATCATCATCATCATCATCACAGCAGTAGGTCCCACTGCGG
ACCTTGTTATACCGACGTCGTTTTGGTCGCCGCCTCGGAATCCGGCCCTG
CTGGCCCCGCCGTTCCCGTCCCCGCTCATAAGGCCGTTTTGGTGAGTCGT
TCTCCAGTGTTTAAAGCCATGCTAGATAATGAAATGGAAGAAAGTCGGAG
TGGCACTATAAAGATCAGTGATGTATCATATGATGCCCTTCGTGCATTTG
TCAATTATTTGTATACTGCAGAAGCTTGCCTTGATGAGCAATTGGCCTGT
GACCTTTTGGAGTTGGCTGAAAAATATCAGGTGAAGCATCTTAAAGCATA
CTGTGAGAAGTTCCTGGTATCCAAACTGAATTGGGACAATTCTGTTGTGA
ACTATGCTTTTGCGCACCAGCACAATGCAAAGCAGTTGCTTGAAGCAGCA
CTGTCATTGATCACGGACAACATGGACAAGC
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