CX295625

Overview
NameCX295625
Unique NameCX295625
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10228 contig Ccv1_Contig10228:85..776. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295625 vs. ExPASy Swiss-Prot
Match: PSBO_TOBAC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1)

HSP 1 Score: 351.673 bits (901), Expect = 2.167e-96
Identity = 180/214 (84.11%), Postives = 189/214 (88.32%), Query Frame = 3
Query:   21 MAASLQAAATLMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGARISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLF 662
            MAASLQAAATLMQPTKVGV PA            VSKAFGV+ A AR++C+L  +LKDLAQK  DA K+AGFALATSALVVSGA+AEGVPKRLT+DEIQSKTYMEVKGTGTANQCPTIDGGV SFAFKPGKY AKKFCLEPTSFTVKAESVNKNAPPDFQ TKLMTRLTYTLDEIEGPFEVS DGT+KF EKDGIDYAAVTVQLPGGERVPFLF
Sbjct:    1 MAASLQAAATLMQPTKVGVAPARNNLQLRSAQS-VSKAFGVEPAAARLTCSLQTELKDLAQKFTDAAKVAGFALATSALVVSGANAEGVPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVASFAFKPGKYNAKKFCLEPTSFTVKAESVNKNAPPDFQKTKLMTRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPFLF 213          
BLAST of CX295625 vs. ExPASy Swiss-Prot
Match: PSBO_SOLTU (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 2.396e-95
Identity = 177/214 (82.71%), Postives = 188/214 (87.85%), Query Frame = 3
Query:   21 MAASLQAAATLMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGARISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLF 662
            MAASLQAAATLMQPTKVG V A            VSKAFG++ + +R+SC+L  DLKD AQKC DA KIAGFALATSALVVSGA+AEGVPKRLT+DEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKY AKKFCLEPTSFTVKAE V+KN+ PDFQ TKLMTRLTYTLDEIEGPFEVSPDGT+KF EKDGIDYAAVTVQLPGGERVPFLF
Sbjct:    1 MAASLQAAATLMQPTKVGGVSARNNLQLRSSQS-VSKAFGLEPSASRLSCSLQTDLKDFAQKCTDAAKIAGFALATSALVVSGANAEGVPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYNAKKFCLEPTSFTVKAEGVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLF 213          
BLAST of CX295625 vs. ExPASy Swiss-Prot
Match: PSBO_SOLLC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2)

HSP 1 Score: 341.273 bits (874), Expect = 2.929e-93
Identity = 173/214 (80.84%), Postives = 185/214 (86.45%), Query Frame = 3
Query:   21 MAASLQAAATLMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGARISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLF 662
            MAASLQAAATLMQPTKVGV               VSKAFGV+    R++C+L  ++K+LAQKC DA KIAGFALATSALVVSGA+AEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTI+GGV SFAFKPGKY AKKFCLEPTSFTVKAE V+KN+ PDFQ TKLMTRLTYTLDEIEGPFEVSPDGT+KF EKDGIDYAAVTVQLPGGERVPFLF
Sbjct:    1 MAASLQAAATLMQPTKVGV----RNNLQLRSAQSVSKAFGVEQGSGRLTCSLQTEIKELAQKCTDAAKIAGFALATSALVVSGANAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIEGGVGSFAFKPGKYTAKKFCLEPTSFTVKAEGVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLF 210          
BLAST of CX295625 vs. ExPASy Swiss-Prot
Match: PSBO_PEA (Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.274e-88
Identity = 165/214 (77.10%), Postives = 182/214 (85.05%), Query Frame = 3
Query:   21 MAASLQAAATLMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGARISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLF 662
            MAASLQAAATLMQPTK+                 VSKAFG++  GA+++C+L +D K+LA KCV+A+KIAGFALATSALVVSGASAEG PKRLT+DEIQSKTY+EVKGTGTANQCPTIDGGVDSF+FKPGKY AKK CLEPTSFTVK+E V KN P  FQNTKLMTRLTYTLDEIEGPFEVS DG++KF EKDGIDYAAVTVQLPGGERVPFLF
Sbjct:    1 MAASLQAAATLMQPTKL-----RSNTLQLKSNQSVSKAFGLEHYGAKVTCSLQSDFKELAHKCVEASKIAGFALATSALVVSGASAEGAPKRLTFDEIQSKTYLEVKGTGTANQCPTIDGGVDSFSFKPGKYNAKKLCLEPTSFTVKSEGVTKNTPLAFQNTKLMTRLTYTLDEIEGPFEVSADGSVKFEEKDGIDYAAVTVQLPGGERVPFLF 209          
BLAST of CX295625 vs. ExPASy Swiss-Prot
Match: PSBO2_ARATH (Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 6.321e-88
Identity = 161/214 (75.23%), Postives = 180/214 (84.11%), Query Frame = 3
Query:   21 MAASLQAAATLMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGARISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLF 662
            MA SLQAAAT +QP K+   P+            V K+FG+DS+ AR++C+L++DLKD A KC DA KIAGFALATSALVVSGA AEG PKRLTYDEIQSKTYMEVKGTGTANQCPTIDGG ++F+FK GKY  KKFC EPTSFTVKA+SV+KNAPPDFQNTKLMTRLTYTLDEIEGPFEV  DG++KF E+DGIDYAAVTVQLPGGERVPFLF
Sbjct:    1 MATSLQAAATFLQPAKIAASPSRNVHLRSNQT--VGKSFGLDSSQARLTCSLHSDLKDFAGKCSDAAKIAGFALATSALVVSGAGAEGAPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGSETFSFKAGKYTGKKFCFEPTSFTVKADSVSKNAPPDFQNTKLMTRLTYTLDEIEGPFEVGSDGSVKFKEEDGIDYAAVTVQLPGGERVPFLF 212          
BLAST of CX295625 vs. ExPASy Swiss-Prot
Match: PSBO_FRIAG (Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 2.656e-86
Identity = 162/215 (75.35%), Postives = 185/215 (86.05%), Query Frame = 3
Query:   21 MAASLQAAATLMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGA-RISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLF 662
            MA+SLQAAATL+ P KVG  PA            +SKAFG D++ A R++C++N+DL+D+AQKC DA K+AGFALATSALV+SGASAEGVPKRLT+DEIQSKTYMEVKG+GTANQCPTI+GG +SF +K GKY  KK CLEPTSFTVKAE +NKNAPP+FQ TKLMTRLTYTLDEIEGPFEV+PDGT+KF EKDGIDYAAVTVQLPGGERVPFLF
Sbjct:    1 MASSLQAAATLI-PAKVGA-PARTHLRSNSH---LSKAFGFDNSTAGRLTCSINSDLRDIAQKCTDAAKLAGFALATSALVISGASAEGVPKRLTFDEIQSKTYMEVKGSGTANQCPTIEGGTESFGYKTGKYTLKKLCLEPTSFTVKAEGINKNAPPEFQKTKLMTRLTYTLDEIEGPFEVAPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLF 210          
BLAST of CX295625 vs. ExPASy Swiss-Prot
Match: PSBO_SPIOL (Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 2.936e-85
Identity = 163/216 (75.46%), Postives = 180/216 (83.33%), Query Frame = 3
Query:   21 MAASLQAAATLMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSA--GARISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLF 662
            MAASLQA+ T +QPTKV    A            V KAFGV+SA  G R+S +L +DLK+LA KCVDATK+AG ALATSAL+ SGA+AEG  KRLTYDEIQSKTY+EVKGTGTANQCPT++GGVDSFAFKPGKY AKKFCLEPT F VKAE ++KN+ PDFQNTKLMTRLTYTLDEIEGPFEVS DGT+KF EKDGIDYAAVTVQLPGGERVPFLF
Sbjct:    1 MAASLQASTTFLQPTKV----ASRNTLQLRSTQNVCKAFGVESASSGGRLSLSLQSDLKELANKCVDATKLAGLALATSALIASGANAEG-GKRLTYDEIQSKTYLEVKGTGTANQCPTVEGGVDSFAFKPGKYTAKKFCLEPTKFAVKAEGISKNSGPDFQNTKLMTRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPFLF 211          
BLAST of CX295625 vs. ExPASy Swiss-Prot
Match: PSBO1_ARATH (Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2)

HSP 1 Score: 314.694 bits (805), Expect = 2.936e-85
Identity = 154/214 (71.96%), Postives = 177/214 (82.71%), Query Frame = 3
Query:   21 MAASLQAAATLMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGARISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLF 662
            MAASLQ+ AT +Q  K+   P+            V K+FG++++ AR++C+  +D KD   KC DA KIAGFALATSALVVSGASAEG PKRLTYDEIQSKTYMEVKGTGTANQCPTIDGG ++F+FKPGKY  KKFC EPTSFTVKA+SV+KNAPP+FQNTKLMTRLTYTLDEIEGPFEV+ DG++ F E+DGIDYAAVTVQLPGGERVPFLF
Sbjct:    1 MAASLQSTATFLQSAKIATAPSRGSSHLRSTQA-VGKSFGLETSSARLTCSFQSDFKDFTGKCSDAVKIAGFALATSALVVSGASAEGAPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGSETFSFKPGKYAGKKFCFEPTSFTVKADSVSKNAPPEFQNTKLMTRLTYTLDEIEGPFEVASDGSVNFKEEDGIDYAAVTVQLPGGERVPFLF 213          
BLAST of CX295625 vs. ExPASy Swiss-Prot
Match: PSBO_WHEAT (Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 4.388e-81
Identity = 156/214 (72.90%), Postives = 175/214 (81.78%), Query Frame = 3
Query:   21 MAASLQAAATLMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGARISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLF 662
            MAASLQAAAT+M P K+G                V++AFGVD AGARI+C+L +D++++A KC DA K+AGFALATSAL+VSGA+AEG PKRLT+DEIQSKTYMEVKGTGTANQCPTIDGGVDSF FK GKY+ KKFCLEPTSFTVKAE + KN PP FQ TKLMTRLTYTLDE+EGP EV    T+KF EKDGIDYAAVTVQLPGGERV FLF
Sbjct:    1 MAASLQAAATVM-PAKIG-----GRASSARPSSHVARAFGVD-AGARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGATAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPRFQKTKLMTRLTYTLDEMEGPLEVRRRRTLKFEEKDGIDYAAVTVQLPGGERVAFLF 207          
BLAST of CX295625 vs. ExPASy Swiss-Prot
Match: PSBO_VOLCA (Oxygen-evolving enhancer protein 1, chloroplastic OS=Volvox carteri GN=PSBO PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.835e-38
Identity = 79/144 (54.86%), Postives = 96/144 (66.67%), Query Frame = 3
Query:  234 FALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTID-GGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLF 662
            F  A +A+V + A   G    LTYDE+Q  TY++VKGTG AN CP ++ G  D      G Y+ + FC+EPTSFTVK ESV K    +F  TKLMTRLTYTLD + G  +V  DG+ +  E+DGIDYAA TVQLPGGERV FLF
Sbjct:   32 FGQAAAAVVAASALVAGSANALTYDELQGLTYLQVKGTGIANTCPVLEKGSTDLSELSAGTYKLENFCIEPTSFTVKEESVFKGGETEFVKTKLMTRLTYTLDAMSGTLKVGSDGSAELKEEDGIDYAATTVQLPGGERVAFLF 175          
The following BLAST results are available for this feature:
BLAST of CX295625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PSBO_TOBAC2.167e-9684.11Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLTU2.396e-9582.71Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLLC2.929e-9380.84Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_PEA1.274e-8877.10Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO2_ARATH6.321e-8875.23Oxygen-evolving enhancer protein 1-2, chloroplasti... [more]
PSBO_FRIAG2.656e-8675.35Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SPIOL2.936e-8575.46Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO1_ARATH2.936e-8571.96Oxygen-evolving enhancer protein 1-1, chloroplasti... [more]
PSBO_WHEAT4.388e-8172.90Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_VOLCA7.835e-3854.86Oxygen-evolving enhancer protein 1, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionC05074B10SK DroRLeaf1 Citrus clementina cDNA clone C05074B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295625 ID=CX295625; Name=CX295625; organism=Citrus clementina; type=EST; length=691bp
CACGAGTGGTAGGGAGCAAGATGGCAGCCTCGTTACAAGCCGCAGCTACA
CTGATGCAACCCACCAAGGTGGGTGTGGTACCCGCTCGCAGCAGCAGCCT
GCAGCTGAGGTCTTCACAGAGCGTTTCGAAGGCTTTTGGTGTCGACTCAG
CTGGTGCTAGGATCTCTTGCACTTTGAATAATGACTTGAAGGATTTGGCT
CAGAAATGTGTTGATGCTACCAAGATCGCTGGCTTTGCCCTCGCCACTTC
TGCTCTCGTCGTTTCGGGAGCAAGTGCTGAAGGTGTTCCAAAGAGGCTAA
CCTATGATGAAATCCAGAGCAAGACATACATGGAAGTAAAGGGAACCGGA
ACTGCTAACCAGTGCCCAACCATTGATGGCGGAGTTGACTCTTTTGCCTT
CAAACCTGGCAAATACCAGGCTAAGAAGTTCTGCCTAGAACCAACTTCCT
TCACTGTCAAGGCTGAGAGTGTCAACAAGAATGCCCCACCAGATTTCCAG
AACACCAAGCTCATGACCCGCCTTACCTACACCCTTGACGAGATTGAGGG
ACCTTTTGAAGTGTCCCCCGATGGCACCATTAAGTTTGTGGAGAAGGATG
GAATTGACTATGCTGCTGTGACAGTTCAGCTGCCTGGAGGCGAGCGTGTG
CCCTTCCTTTTCCCATCAAACAATTGGTAGCATCAGGCAGC
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