CX295637

Overview
NameCX295637
Unique NameCX295637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig90 contig Ccv1_Contig90:31..737. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295637 vs. ExPASy Swiss-Prot
Match: CAHC_ARATH (Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 1.937e-75
Identity = 115/152 (75.66%), Postives = 123/152 (80.92%), Query Frame = 1
Query:  253 LKTEKEDLKPVAAAKVEQITAQLQT--PSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGN 702
            L  EKE+LK VAAAKVEQITA LQT   SD KAFD VE IK+GFI FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDFQPG+AFVVRN+AN+VPP+D+ K            LHLKV NIVVIGHSACGGIKGLMSF  DGN
Sbjct:   93 LLIEKEELKTVAAAKVEQITAALQTGTSSDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGN 244          

HSP 2 Score: 78.5666 bits (192), Expect = 1.937e-75
Identity = 47/84 (55.95%), Postives = 55/84 (65.48%), Query Frame = 3
Query:   33 LTSVSQAQSSLIKSSTLRPSIVARL------------NSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLL 248
            LTS+S +QSSL K S    S VA L            +S  S P+LIRNEPVFAAPAPII P W E+M  ++Y+EAIEALKKLL
Sbjct:   11 LTSLSPSQSSLQKLSLRTSSTVACLPPASSSSSSSSSSSSRSVPTLIRNEPVFAAPAPIIAPYWSEEMGTEAYDEAIEALKKLL 94          
BLAST of CX295637 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.933e-72
Identity = 104/150 (69.33%), Postives = 121/150 (80.67%), Query Frame = 1
Query:  253 LKTEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGN 702
            L +EK +L P+AAA+V+QITA+LQ+   +K FD VE +K GFIHFK EKYEKNPALY EL+KGQSPK+MVFACSDSRVCPSHVL+FQPGEAFVVRN+AN+VP YD+T+            LHLKV NIVVIGHSACGGIKGLMS   DG+
Sbjct:   80 LLSEKGELGPIAAARVDQITAELQSSDGSKPFDPVEHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGS 229          

HSP 2 Score: 80.1073 bits (196), Expect = 1.933e-72
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 3
Query:   24 NWCLTSVSQAQSSLIKSSTLRPSIVARLN---SPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLN 251
            N CLT +S AQ+SL K +  RP   ARL+   S  S PSLIRNEPVFAAP PIINP  RE+MA +SYE+AI AL+KLL+
Sbjct:    7 NSCLT-ISPAQASLKKPT--RPVAFARLSNSSSSTSVPSLIRNEPVFAAPTPIINPILREEMAKESYEQAIAALEKLLS 82          
BLAST of CX295637 vs. ExPASy Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 7.265e-69
Identity = 99/151 (65.56%), Postives = 115/151 (76.16%), Query Frame = 1
Query:  253 LKTEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNT 705
            L +EK +L+  AA+KV QIT++L       A   V+RIKEGFI FK+EKYEKNPALY EL+KGQ+PK+MVFACSDSRVCPSHVLDFQPGEAF+VRN+AN+VP +D+ K            LHLKV NIVVIGHSACGGIKGLMSF   G T
Sbjct:   78 LLSEKGELENEAASKVAQITSELADGGTPSASYPVQRIKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPDAGPT 228          

HSP 2 Score: 87.4261 bits (215), Expect = 7.265e-69
Identity = 52/88 (59.09%), Postives = 65/88 (73.86%), Query Frame = 3
Query:   24 NWCLTSVSQAQSSLIKSSTLRPSIVA--RLNSPAS-PPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLNA*NGEGRLE 278
            N CLTS+S +++ L  +STLRP+ +A  R+N  +S PPSLIRN+PVFAAPAPII P  +EDMA   YEEAI ALKKLL+    +G LE
Sbjct:    5 NGCLTSISPSRTQLKNTSTLRPTFIANSRVNPSSSVPPSLIRNQPVFAAPAPIITPTLKEDMA---YEEAIAALKKLLSE---KGELE 86          
BLAST of CX295637 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.739e-68
Identity = 99/146 (67.81%), Postives = 112/146 (76.71%), Query Frame = 1
Query:  262 EKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDG 699
            EK +L+PVAAA+++QITAQ   P     FD VERIK GF+ FK EK+  NPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+F  +G
Sbjct:   92 EKGELEPVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEG 237          

HSP 2 Score: 77.7962 bits (190), Expect = 2.739e-68
Identity = 42/71 (59.15%), Postives = 53/71 (74.65%), Query Frame = 3
Query:   36 TSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLL 248
            +S S A+S ++ +     S  +  +S A+PPSLIRNEPVFAAPAPII PNW ED  N+SYEEAI+ALKK+L
Sbjct:   23 SSTSSARSGVLSAKFTCNS--SSSSSSATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKML 90          
BLAST of CX295637 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 3.572e-68
Identity = 99/146 (67.81%), Postives = 112/146 (76.71%), Query Frame = 1
Query:  262 EKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDG 699
            EK +L+PVAAA+++QITAQ   P     FD VERIK GF+ FK EK+  NPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+F  +G
Sbjct:   92 EKGELEPVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEG 237          

HSP 2 Score: 77.411 bits (189), Expect = 3.572e-68
Identity = 42/71 (59.15%), Postives = 53/71 (74.65%), Query Frame = 3
Query:   36 TSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLL 248
            +S S A+S ++ +     S  +  +S A+PPSLIRNEPVFAAPAPII PNW ED  N+SYEEAI+ALKK+L
Sbjct:   23 SSTSSARSGVLSARFTCNS--SSSSSSATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKML 90          
BLAST of CX295637 vs. ExPASy Swiss-Prot
Match: CAHX_FLAPR (Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.757e-67
Identity = 98/146 (67.12%), Postives = 111/146 (76.03%), Query Frame = 1
Query:  262 EKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDG 699
            EK +L+PVAAA+++QITAQ   P     FD VERIK GF+ FK EK+  NP LY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+F  +G
Sbjct:   91 EKGELEPVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEG 236          

HSP 2 Score: 76.6406 bits (187), Expect = 1.757e-67
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 3
Query:  108 NSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLL 248
            +S A+PPSLIRNEPVFAAPAPII PNW ED  N+SYEEAI+ALKK+L
Sbjct:   44 SSSATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKML 89          
BLAST of CX295637 vs. ExPASy Swiss-Prot
Match: CAHX_FLABI (Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 2.988e-67
Identity = 98/146 (67.12%), Postives = 111/146 (76.03%), Query Frame = 1
Query:  262 EKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDG 699
            EK +L+PVAA +++QITAQ   P     FD VERIK GF+ FK EK+  NPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+F  +G
Sbjct:   92 EKGELEPVAATRIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEG 237          

HSP 2 Score: 75.8702 bits (185), Expect = 2.988e-67
Identity = 41/72 (56.94%), Postives = 50/72 (69.44%), Query Frame = 3
Query:   33 LTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLL 248
            L   S +  S + S+    +  +  +S A+PPSLIRNEPVFAAPAPII PNW ED  N+SYEEAI+ALKK L
Sbjct:   20 LKKASTSARSGVLSARFTCNSSSSSSSSATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKTL 90          
BLAST of CX295637 vs. ExPASy Swiss-Prot
Match: CAHC_PEA (Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.896e-67
Identity = 109/152 (71.71%), Postives = 119/152 (78.29%), Query Frame = 1
Query:  253 LKTEKEDLKPVAAAKVEQITAQLQTPSDTKAF---DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDG 699
            L  EK +LK  AA KVEQITAQL T S +      ++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPPYDQ K            LHLKVSNIVVIGHSACGGIKGL+SF FDG
Sbjct:   84 LLREKTELKATAAEKVEQITAQLGTTSSSDGIPKSEASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDG 235          

HSP 2 Score: 61.6178 bits (148), Expect = 3.896e-67
Identity = 38/81 (46.91%), Postives = 57/81 (70.37%), Query Frame = 3
Query:   21 HNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASP-----PSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLL 248
            + + L+S+S A++S  K +TLRP + A LN+ +S      PSLI+++PVFA+ +PII P  RE+M  + Y+EAIE L+KLL
Sbjct:    7 NGFSLSSLSPAKTST-KRTTLRPFVSASLNTSSSSSSSTFPSLIQDKPVFASSSPIITPVLREEM-GKGYDEAIEELQKLL 85          
BLAST of CX295637 vs. ExPASy Swiss-Prot
Match: CAH2_ARATH (Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.450e-60
Identity = 111/152 (73.03%), Postives = 125/152 (82.24%), Query Frame = 1
Query:  253 LKTEKEDLKPVAAAKVEQITAQLQ--TPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGN 702
            L  EK+DLK VAAAKV++ITA+LQ  + SD+K+FD VERIKEGF+ FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDF PG+AFVVRN+AN+VPP+D+ K            LHLKV NIVVIGHSACGGIKGLMSF  DGN
Sbjct:   16 LLIEKDDLKDVAAAKVKKITAELQAASSSDSKSFDPVERIKEGFVTFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGN 167          

HSP 2 Score: 31.5722 bits (70), Expect = 1.450e-60
Identity = 14/17 (82.35%), Postives = 16/17 (94.12%), Query Frame = 3
Query:  198 MANQSYEEAIEALKKLL 248
            M N+SYE+AIEALKKLL
Sbjct:    1 MGNESYEDAIEALKKLL 17          
BLAST of CX295637 vs. ExPASy Swiss-Prot
Match: CAH2_FLALI (Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.342e-35
Identity = 71/97 (73.20%), Postives = 76/97 (78.35%), Query Frame = 1
Query:  409 NPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDG 699
            NP LY ELAKGQSPK++VFACSDSRVCPSH+LDFQPGEAFVVRN+AN+VPPYD  K            LHLKV NIVVIGHS CGGIKGLMS   DG
Sbjct:    1 NPTLYGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDG 97          
The following BLAST results are available for this feature:
BLAST of CX295637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
CAHC_ARATH1.937e-7575.66Carbonic anhydrase, chloroplastic OS=Arabidopsis t... [more]
CAHC_TOBAC1.933e-7269.33Carbonic anhydrase, chloroplastic OS=Nicotiana tab... [more]
CAHC_SPIOL7.265e-6965.56Carbonic anhydrase, chloroplastic OS=Spinacia oler... [more]
CAHX_FLABR2.739e-6867.81Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1[more]
CAH1_FLALI3.572e-6867.81Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=... [more]
CAHX_FLAPR1.757e-6767.12Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1[more]
CAHX_FLABI2.988e-6767.12Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2[more]
CAHC_PEA3.896e-6771.71Carbonic anhydrase, chloroplastic OS=Pisum sativum... [more]
CAH2_ARATH1.450e-6073.03Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA... [more]
CAH2_FLALI1.342e-3573.20Carbonic anhydrase 2 (Fragment) OS=Flaveria linear... [more]

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Properties
Property NameValue
Genbank descriptionC05074C10SK DroRLeaf1 Citrus clementina cDNA clone C05074C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295637 ID=CX295637; Name=CX295637; organism=Citrus clementina; type=EST; length=717bp
GATTCGGCCGAGGCTTCGATCATAACTGGTGCCTTACTTCTGTTTCTCAA
GCTCAATCCTCTCTCATCAAAAGCTCCACATTACGTCCCTCCATCGTTGC
AAGGCTCAACTCTCCTGCTTCTCCTCCTAGCCTCATCCGAAACGAGCCCG
TTTTTGCTGCACCAGCTCCTATCATCAACCCTAACTGGAGGGAAGACATG
GCAAATCAGTCGTACGAGGAAGCCATTGAAGCTCTCAAGAAACTTCTCAA
TGCTTAAAACGGAGAAGGAAGACTTGAAACCTGTTGCTGCTGCAAAAGTA
GAGCAGATTACTGCGCAGCTACAGACTCCATCTGACACCAAAGCATTTGA
TTCCGTGGAGAGGATCAAAGAGGGCTTCATTCACTTCAAGAGAGAAAAAT
ACGAGAAAAATCCAGCTCTGTACTCTGAGCTCGCCAAAGGCCAAAGCCCG
AAGTATATGGTATTTGCCTGCTCAGACTCCAGGGTTTGCCCGTCCCATGT
GTTGGATTTTCAACCTGGGGAAGCTTTCGTGGTTCGCAATGTTGCTAACA
TTGTTCCACCCTATGATCAGACTAAATATGCTGGAGTTGGAGCTGCTGTC
GAGTATGCAGTTTTGCATCTCAAGGTTTCAAACATTGTGGTCATTGGGCA
CAGCGCCTGTGGTGGCATCAAAGGACTCATGTCTTTCACATTTGATGGAA
ACACTCCACGATTTCAT
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