CX295652

Overview
NameCX295652
Unique NameCX295652
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295652 vs. ExPASy Swiss-Prot
Match: PGES2_DANRE (Prostaglandin E synthase 2 OS=Danio rerio GN=ptges2 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.145e-34
Identity = 83/199 (41.71%), Postives = 110/199 (55.28%), Query Frame = 1
Query:  265 KEQPRSQKFSDV--VLYQYEACPFCNKVKAFLDYYRIPYKVVEVNPISKKEIKWSDYKKVPILKVDGE-QMVDSSDIM--------------------------------------DKLFQRIH------LDNASSQSDEEKKWRAWVDNHLVHVLSPNIYRTTSEALESFDYITTQGNFSFTEKLVAKYAGAAAMYFV 720
            KE   S   +D+   LYQY+ CPFC+KV+AFLDY+R+PY++VEVNP+ ++EIKWS Y+KVPIL V+G  Q+ DSS I+                                      +K +  +H      L        EE KWR W D+ LVH++SPN+YRT +EAL SFDYI  +G F   E   AKY GAAAM+ +
Sbjct:   94 KESDASDLDTDLKLTLYQYKTCPFCSKVRAFLDYHRLPYEIVEVNPVMRQEIKWSTYRKVPILMVNGTVQLNDSSVIISALKTYISSKDKKISEILACYPEMKSKNDRGKDVIEFGNKYWVMVHDADADQLYPGKDSRKEEIKWRTWADDWLVHLISPNVYRTPTEALASFDYIVREGKFGSFEGFFAKYFGAAAMWII 292          
BLAST of CX295652 vs. ExPASy Swiss-Prot
Match: PGES2_MOUSE (Prostaglandin E synthase 2 OS=Mus musculus GN=Ptges2 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.829e-32
Identity = 81/204 (39.71%), Postives = 108/204 (52.94%), Query Frame = 1
Query:  250 AKPQAKEQPRSQKFSDVVLYQYEACPFCNKVKAFLDYYRIPYKVVEVNPISKKEIKWSDYKKVPILKVDG----EQMVDSSDIMDKLFQRI-----------------------------------HLDNASSQS--------DEEKKWRAWVDNHLVHVLSPNIYRTTSEALESFDYITTQGNFSFTEKLVAKYAGAAAMYFV 720
            A+  A + P S     + LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL        +Q+ DSS I+  L   +                                    LD   +Q          EE KWR W D+ LVH++SPN+YRT +EAL SFDYI  +G F   E  +AKY GAAAMY +
Sbjct:   86 AERSAAQLPLSNSLQ-LTLYQYKTCPFCSKVRAFLDFHSLPYQVVEVNPVRRTEIKFSSYRKVPILVAQEGDSLQQLNDSSVIISALKTYLVSGQPLEEVITYYPPMKAMNDQGKEVTEFCNKYWPMLDEKEAQQMYGGKEARTEEMKWRQWADDWLVHLISPNVYRTPAEALASFDYIVREGKFGAVEAAMAKYVGAAAMYLI 288          
BLAST of CX295652 vs. ExPASy Swiss-Prot
Match: PGES2_MACFA (Prostaglandin E synthase 2 OS=Macaca fascicularis GN=PTGES2 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.949e-32
Identity = 76/190 (40.00%), Postives = 103/190 (54.21%), Query Frame = 1
Query:  298 VVLYQYEACPFCNKVKAFLDYYRIPYKVVEVNPISKKEIKWSDYKKVPILKVD----GEQMVDSSDIM---------------------------------------------DKLFQRIHLDNASSQSDEEKKWRAWVDNHLVHVLSPNIYRTTSEALESFDYITTQGNFSFTEKLVAKYAGAAAMYFV 720
            + LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL        +Q+ DSS I+                                             +K  Q+++  +      EE KWR W D+ LVH++SPN+YRT +EAL SFDYI  +G F   E  VAKY GAAAMY +
Sbjct:  102 LTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVLRAEIKFSSYRKVPILVAQEGESSQQLNDSSVIISALKTYLVSGQPLEEIITYYPAMKAVNDQGKEVTEFGNKYWLMLNEKEAQQVY--SGKEARTEEMKWRQWADDWLVHLISPNVYRTPTEALASFDYIVREGKFGAVEGAVAKYMGAAAMYLI 289          
BLAST of CX295652 vs. ExPASy Swiss-Prot
Match: PGES2_HUMAN (Prostaglandin E synthase 2 OS=Homo sapiens GN=PTGES2 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.949e-32
Identity = 77/188 (40.96%), Postives = 102/188 (54.26%), Query Frame = 1
Query:  298 VVLYQYEACPFCNKVKAFLDYYRIPYKVVEVNPISKKEIKWSDYKKVPILKVD----GEQMVDSSDIMDKLFQRI-----------------------------------HLDNASSQS--------DEEKKWRAWVDNHLVHVLSPNIYRTTSEALESFDYITTQGNFSFTEKLVAKYAGAAAMYFV 720
            + LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL        +Q+ DSS I+  L   +                                    L+   +Q          EE KWR W D+ LVH++SPN+YRT +EAL SFDYI  +G F   E  VAKY GAAAMY +
Sbjct:  102 LTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVRRAEIKFSSYRKVPILVAQEGESSQQLNDSSVIISALKTYLVSGQPLEEIITYYPAMKAVNEQGKEVTEFGNKYWLMLNEKEAQQVYGGKEARTEEMKWRQWADDWLVHLISPNVYRTPTEALASFDYIVREGKFGAVEGAVAKYMGAAAMYLI 289          
The following BLAST results are available for this feature:
BLAST of CX295652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PGES2_DANRE1.145e-3441.71Prostaglandin E synthase 2 OS=Danio rerio GN=ptges... [more]
PGES2_MOUSE1.829e-3239.71Prostaglandin E synthase 2 OS=Mus musculus GN=Ptge... [more]
PGES2_MACFA6.949e-3240.00Prostaglandin E synthase 2 OS=Macaca fascicularis ... [more]
PGES2_HUMAN6.949e-3240.96Prostaglandin E synthase 2 OS=Homo sapiens GN=PTGE... [more]
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Properties
Property NameValue
Genbank descriptionC05074E01SK DroRLeaf1 Citrus clementina cDNA clone C05074E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295652 ID=CX295652; Name=CX295652; organism=Citrus clementina; type=EST; length=722bp
CCGGGCTGCAGATTCGGCCGAGGGGAGATTTAACGACTCGCCACCCTTAG
CCGAGCCGTTTCTAGCGGCGCCACCTCAGCAGCCACTCAACATCGTCATC
ATCAGCTGGCTCAACCGGCGGCTCTCTTCAGCACATTCTCATCTTGTCAA
TCTCAAGGTTTCGCGCAAAAGATCGTCAATCGGCTTGGCCCGTCTTTTGC
TGGCGGAGTTGCGGGGTTCTCTGCGGCTGCCCCTTCACTAGCTCAAGACG
CTAAGCCTCAGGCTAAGGAGCAGCCTCGGTCTCAGAAGTTTAGCGACGTC
GTTCTCTATCAGTATGAAGCTTGTCCTTTCTGCAACAAAGTTAAAGCATT
TTTGGATTATTATAGGATTCCTTACAAAGTTGTGGAGGTCAATCCTATCA
GCAAAAAAGAGATTAAGTGGTCTGATTATAAGAAGGTGCCCATACTGAAG
GTTGATGGTGAACAGATGGTGGATTCCTCAGATATAATGGATAAGCTGTT
CCAAAGGATTCATCTTGACAATGCTTCCTCTCAAAGCGATGAGGAGAAGA
AGTGGCGTGCGTGGGTGGATAATCACTTGGTGCATGTTTTGTCTCCGAAC
ATATATCGAACCACTTCTGAAGCACTTGAGTCATTTGACTATATCACCAC
TCAAGGCAACTTCAGTTTCACTGAGAAGTTAGTGGCGAAGTATGCTGGAG
CAGCTGCAATGTATTTTGTGTC
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