CX295654

Overview
NameCX295654
Unique NameCX295654
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.739e-35
Identity = 74/133 (55.64%), Postives = 95/133 (71.43%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            +VSDFGLS+   +  +HVSS+ +GTVGYLDPEYY SQQLT+KSDVYSFGV+L EL+SG++ +S E FG    NIV WA+  I  GD+ GIIDP +     I+S+W++AE A  CV   GH RP + EV+  IQ
Sbjct:  746 KVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPEL-NIVHWARSLIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAIQ 877          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.991e-28
Identity = 61/133 (45.86%), Postives = 89/133 (66.92%), Query Frame = 1
Query:   13 EVSDFGLSK-FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDI 408
            +++DFGLS+ F VDG SHVS++V GT GYLDPEYY +  L++KSDVYSFGV+LLE+++ Q      +      +I +W    +  GDI+ I+DP L+ +YD    WKI E AL CV P  + RP+++ V+ ++
Sbjct:  705 KLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTR---ERTHINEWVGSMLTKGDIKSILDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVTEL 834          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 7.825e-28
Identity = 60/133 (45.11%), Postives = 88/133 (66.17%), Query Frame = 1
Query:   13 EVSDFGLSK-FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDI 408
            +++DFGLS+ F +DG  HVS++V GT GYLDPEYY +  L++KSDVYSFGV+LLE+++ Q  I   +      +I  W    +  GDI+ I+DP L+ +YD    WKI E AL CV P  + RP+++ V+ ++
Sbjct:  723 KLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVIDKTR---ERPHINDWVGFMLTKGDIKSIVDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVMEL 852          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.022e-27
Identity = 60/136 (44.12%), Postives = 89/136 (65.44%), Query Frame = 1
Query:    4 SAEEVSDFGLSK-FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDI 408
            S  +++DFGLS+ F VDG SHV ++V GT GYLDPEYY +  L++KSDVYSFGV+LLE+++ Q  ++  +      +I +W    +  GDI+ I+DP L  +YD   +WK+ E AL CV P    RP++  V+ ++
Sbjct:  706 SQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVMNKNR---ERPHINEWVMFMLTNGDIKSIVDPKLNEDYDTNGVWKVVELALACVNPSSSRRPTMPHVVMEL 838          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.335e-27
Identity = 60/134 (44.78%), Postives = 93/134 (69.40%), Query Frame = 1
Query:   13 EVSDFGLSK-FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            +++DFGLS+ F ++G +HVS++V GT+GYLDPEYY +  LT+KSDVYSFGV+LL +I+ Q  I   +     R+I +W    +  GDI+ I DP+LL +Y+  S+WK  E A+ C+ P    RP++S+V+ +++
Sbjct:  717 KLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVIDQNR---EKRHIAEWVGGMLTKGDIKSITDPNLLGDYNSGSVWKAVELAMSCMNPSSMTRPTMSQVVFELK 847          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.743e-27
Identity = 57/134 (42.54%), Postives = 96/134 (71.64%), Query Frame = 1
Query:   13 EVSDFGLSKFAV-DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            +V+DFG SK+A  +G S+VS  VRGT GYLDPEYY +QQL++KSDV+SFGV+LLE++SG+E ++ ++      ++V+WAK +I    +  I+DP +   Y  +++W++ E AL C+ P+   RP + +++++++
Sbjct:  736 KVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEW-SLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELE 868          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.277e-27
Identity = 59/134 (44.03%), Postives = 95/134 (70.90%), Query Frame = 1
Query:   13 EVSDFGLSKFAV-DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            +V+DFG SK+A  +G S+VS  VRGT GYLDPEYY +QQL++KSDV+SFGV+LLE++SG+E + N K      ++V+WAK +I    +  I+DP +   Y  +++W++ E AL C+ P+   RP + +++++++
Sbjct:  737 KVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPL-NIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELE 869          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27
Identity = 59/133 (44.36%), Postives = 91/133 (68.42%), Query Frame = 1
Query:   13 EVSDFGLSK-FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDI 408
            +++DFGLS+ F ++G +HVS++V GT GYLDPEYY +  L +KSDVYSFG++LLE+I+ Q  I+  +      +I +W  L +  GDIQ I+DP L  +YD  S+W+  E A+ C+ P    RP++S+V+ ++
Sbjct:  732 KLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQSR---EKPHIAEWVGLMLTKGDIQNIMDPKLYGDYDSGSVWRAVELAMSCLNPSSARRPTMSQVVIEL 861          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.883e-27
Identity = 61/129 (47.29%), Postives = 87/129 (67.44%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVL 399
            +++DFGLS+  + G     ++V GT GYLDPEY+ +  L+ KSDVYSFGV+LLE+ISGQ+ I   +   NC NIV+W    +E GDI+ I+DP+L  +YD  S WK+ E A+ CV      RP++S+V+
Sbjct:  699 KIADFGLSRSFLIGNEAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLSR--ENC-NIVEWTSFILENGDIESIVDPNLHQDYDTSSAWKVVELAMSCVNRTSKERPNMSQVV 824          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.651e-27
Identity = 67/166 (40.36%), Postives = 97/166 (58.43%), Query Frame = 1
Query:   13 EVSDFGLSK-FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQXXXXXXXXXXXXXXGNSDDMSRNSLHSSLNMG 507
            ++ DFGLS+ F V   +HVS+ V G+ GYLDPEYY +  LT+KSDV+SFGV+LLE+I+ Q  I   +      +I +W    +  GDI+ I+DPS+  +YD  S+WK  E A+ CV P    RP++S+V  ++Q              G  D  S++SL  S + G
Sbjct:  731 KLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTR---EKSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANELQ---ECLLTENSRKGGRHDVDSKSSLEQSTSFG 890          
The following BLAST results are available for this feature:
BLAST of CX295654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
Y1677_ARATH1.739e-3555.64Probable LRR receptor-like serine/threonine-protei... [more]
Y5188_ARATH5.991e-2845.86Probable LRR receptor-like serine/threonine-protei... [more]
Y1518_ARATH7.825e-2845.11Probable LRR receptor-like serine/threonine-protei... [more]
Y5189_ARATH1.022e-2744.12Probable LRR receptor-like protein kinase At1g5189... [more]
Y5181_ARATH1.335e-2744.78Probable LRR receptor-like serine/threonine-protei... [more]
NORK_PEA1.743e-2742.54Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
NORK_MEDTR2.277e-2744.03Nodulation receptor kinase OS=Medicago truncatula ... [more]
RLK6_ARATH2.973e-2744.36Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
Y1755_ARATH3.883e-2747.29Probable LRR receptor-like serine/threonine-protei... [more]
Y4245_ARATH8.651e-2740.36Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC05074E03SK DroRLeaf1 Citrus clementina cDNA clone C05074E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295654 ID=CX295654; Name=CX295654; organism=Citrus clementina; type=EST; length=715bp
GATTCGGCCGAGGAGGTTTCGGATTTTGGTCTATCAAAATTTGCAGTGGA
TGGAGCCTCTCATGTGTCAAGCATAGTACGGGGCACTGTAGGATATCTAG
ATCCTGAGTACTACATCTCCCAGCAGTTAACGGACAAGAGTGACGTTTAT
AGTTTTGGTGTCATTCTTCTTGAGTTGATATCTGGTCAGGAAGCTATATC
CAACGAAAAGTTTGGTGCCAATTGCCGTAACATAGTCCAATGGGCAAAGC
TACACATCGAGACTGGTGACATTCAAGGAATCATTGATCCATCTCTACTA
TATGAATACGACATCCAGTCAATGTGGAAGATAGCGGAAAAAGCTTTGAT
GTGTGTTCTGCCTCACGGACATATGAGACCATCAATATCAGAAGTTCTCA
AGGACATCCAAGATGCTATCGTGATTGAAAGGGAAGCTGCAGCAGCCAGA
GATGGTAACTCAGATGATATGTCTAGGAATTCCCTTCATTCTTCTCTCAA
CATGGGTTCCTTTGGTGGTACTGAGAACTTCCTGTCATTAGACGAGTCCA
TTGTTCGACCAAGTGCTCGATAGTTCTAGTTCTTGTACAAGCAAAAAATT
CCCTTTTCTTTTCCCATTCTCTGGTCTTATTCTTTGTTGTAGCTAGAATT
ACATAGCTAAAATCTATCTAAGTTGCCTCATGTAAGTTTAGATCCACCAT
GTCTGCATGTCATGA
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