CX295678
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295678 vs. ExPASy Swiss-Prot
Match: U603_ARATH (UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana GN=At1g54780 PE=1 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.963e-56 Identity = 116/191 (60.73%), Postives = 139/191 (72.77%), Query Frame = 3 Query: 63 SLHAQQQRQSSLFCTKNITCSLKKH-NPQLLNPSLQVPRSWFAHAQQGXXXXXXXXXXXXXXXXYTNGNALASEFDVLNEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTIKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATVAENLP 632 SLH + SL +K T S KH + + P R+W A+QG G ALASEF++LN+GPPK++Y+VDDAGV+S+VTKSDLK+LLSDLE RK +NFITVRKLT KADAFEYADQVLEKWYPS+EEGNNKGIVVL+TSQKEGA+TGGPAF++AVGE +LDATV+ENLP Sbjct: 20 SLHQTKPTSHSLSLSKPTTFSGPKHLSTRFTKPE---SRNWLIDAKQGLAALALSLTLTFSPV----GTALASEFNILNDGPPKETYVVDDAGVLSRVTKSDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKGIVVLITSQKEGAITGGPAFIEAVGENILDATVSENLP 203
BLAST of CX295678 vs. ExPASy Swiss-Prot
Match: U603_ORYSJ (UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0401100 PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 8.068e-54 Identity = 101/122 (82.79%), Postives = 117/122 (95.90%), Query Frame = 3 Query: 267 ALASEFDVLNEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTIKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATVAENLP 632 A+ASEFDVLN GPP+D+Y+VDDAGV+S+VTKSD+K+L+ DLESRKN INFITVRKLT KADAFEYADQVLEKWYP+VEEGNNKGIVVLVTSQKEGA+TGGPAFV+AVG+E+LD+TV+ENLP Sbjct: 96 AVASEFDVLNGGPPEDTYVVDDAGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTVEEGNNKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLP 217
BLAST of CX295678 vs. ExPASy Swiss-Prot
Match: U603_ORYSI (UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_19898 PE=3 SV=2) HSP 1 Score: 210.305 bits (534), Expect = 8.068e-54 Identity = 101/122 (82.79%), Postives = 117/122 (95.90%), Query Frame = 3 Query: 267 ALASEFDVLNEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTIKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATVAENLP 632 A+ASEFDVLN GPP+D+Y+VDDAGV+S+VTKSD+K+L+ DLESRKN INFITVRKLT KADAFEYADQVLEKWYP+VEEGNNKGIVVLVTSQKEGA+TGGPAFV+AVG+E+LD+TV+ENLP Sbjct: 96 AVASEFDVLNGGPPEDTYVVDDAGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTVEEGNNKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLP 217 The following BLAST results are available for this feature:
BLAST of CX295678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295678 ID=CX295678; Name=CX295678; organism=Citrus clementina; type=EST; length=702bpback to top |