CX295694

Overview
NameCX295694
Unique NameCX295694
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig90 contig Ccv1_Contig90:56..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295694 vs. ExPASy Swiss-Prot
Match: CAHC_ARATH (Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2)

HSP 1 Score: 276.559 bits (706), Expect = 8.785e-74
Identity = 152/240 (63.33%), Postives = 166/240 (69.17%), Query Frame = 2
Query:    8 LTSVSQAQSSLIKSSTLRPSIVARL------------NSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQT--PSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFI 685
            LTS+S +QSSL K S    S VA L            +S  S P+LIRNEPVFAAPAPII P W E+M  ++Y                   VAAAKVEQITA LQT   SD KAFD VE IK+GFI FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDFQPG+AFVVRN+AN+VPP+D+ K            LHLKV NIVVIGHSACGGIKGLMSF  DGNNSTDFI
Sbjct:   11 LTSLSPSQSSLQKLSLRTSSTVACLPPASSSSSSSSSSSSRSVPTLIRNEPVFAAPAPIIAPYWSEEMGTEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTSSDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFI 250          
BLAST of CX295694 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.125e-71
Identity = 144/230 (62.61%), Postives = 165/230 (71.74%), Query Frame = 2
Query:    5 CLTSVSQAQSSLIKSSTLRPSIVARLN---SPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFI 685
            CLT +S AQ+SL K +  RP   ARL+   S  S PSLIRNEPVFAAP PIINP  RE+MA +SY                  P+AAA+V+QITA+LQ+   +K FD VE +K GFIHFK EKYEKNPALY EL+KGQSPK+MVFACSDSRVCPSHVL+FQPGEAFVVRN+AN+VP YD+T+            LHLKV NIVVIGHSACGGIKGLMS   DG+ ST FI
Sbjct:    9 CLT-ISPAQASLKKPT--RPVAFARLSNSSSSTSVPSLIRNEPVFAAPTPIINPILREEMAKESYEQAIAALEKLLSEKGELGPIAAARVDQITAELQSSDGSKPFDPVEHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFI 235          
BLAST of CX295694 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.096e-67
Identity = 134/225 (59.56%), Postives = 155/225 (68.89%), Query Frame = 2
Query:   11 TSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFI 685
            +S S A+S ++ +     S  +  +S A+PPSLIRNEPVFAAPAPII PNW ED  N+SY                  PVAAA+++QITAQ   P     FD VERIK GF+ FK EK+  NPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+F  +G +STDFI
Sbjct:   23 SSTSSARSGVLSAKFTCNS--SSSSSSATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKMLIEKGELEPVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFI 244          
BLAST of CX295694 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 2.737e-67
Identity = 134/225 (59.56%), Postives = 155/225 (68.89%), Query Frame = 2
Query:   11 TSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFI 685
            +S S A+S ++ +     S  +  +S A+PPSLIRNEPVFAAPAPII PNW ED  N+SY                  PVAAA+++QITAQ   P     FD VERIK GF+ FK EK+  NPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+F  +G +STDFI
Sbjct:   23 SSTSSARSGVLSARFTCNS--SSSSSSATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKMLIEKGELEPVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFI 244          
BLAST of CX295694 vs. ExPASy Swiss-Prot
Match: CAHX_FLABI (Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 1.040e-66
Identity = 132/226 (58.41%), Postives = 152/226 (67.26%), Query Frame = 2
Query:    8 LTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFI 685
            L   S +  S + S+    +  +  +S A+PPSLIRNEPVFAAPAPII PNW ED  N+SY                  PVAA +++QITAQ   P     FD VERIK GF+ FK EK+  NPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+F  +G +STDFI
Sbjct:   20 LKKASTSARSGVLSARFTCNSSSSSSSSATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKTLIEKGELEPVAATRIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFI 244          
BLAST of CX295694 vs. ExPASy Swiss-Prot
Match: CAHX_FLAPR (Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.358e-66
Identity = 128/201 (63.68%), Postives = 143/201 (71.14%), Query Frame = 2
Query:   83 NSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFI 685
            +S A+PPSLIRNEPVFAAPAPII PNW ED  N+SY                  PVAAA+++QITAQ   P     FD VERIK GF+ FK EK+  NP LY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+F  +G +STDFI
Sbjct:   44 SSSATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKMLIEKGELEPVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFI 243          
BLAST of CX295694 vs. ExPASy Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 251.521 bits (641), Expect = 3.026e-66
Identity = 136/230 (59.13%), Postives = 161/230 (70.00%), Query Frame = 2
Query:    5 CLTSVSQAQSSLIKSSTLRPSIVA--RLNSPAS-PPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFI 685
            CLTS+S +++ L  +STLRP+ +A  R+N  +S PPSLIRN+PVFAAPAPII P  +EDMA   Y                    AA+KV QIT++L       A   V+RIKEGFI FK+EKYEKNPALY EL+KGQ+PK+MVFACSDSRVCPSHVLDFQPGEAF+VRN+AN+VP +D+ K            LHLKV NIVVIGHSACGGIKGLMSF   G  +TDFI
Sbjct:    7 CLTSISPSRTQLKNTSTLRPTFIANSRVNPSSSVPPSLIRNQPVFAAPAPIITPTLKEDMA---YEEAIAALKKLLSEKGELENEAASKVAQITSELADGGTPSASYPVQRIKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPDAGPTTTDFI 233          
BLAST of CX295694 vs. ExPASy Swiss-Prot
Match: CAHC_PEA (Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 3.953e-66
Identity = 139/234 (59.40%), Postives = 163/234 (69.66%), Query Frame = 2
Query:    8 LTSVSQAQSSLIKSSTLRPSIVARLNSPASP-----PSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAF---DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFI 685
            L+S+S A++S  K +TLRP + A LN+ +S      PSLI+++PVFA+ +PII P  RE+M  + Y                    AA KVEQITAQL T S +      ++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPPYDQ K            LHLKVSNIVVIGHSACGGIKGL+SF FDG  STDFI
Sbjct:   11 LSSLSPAKTST-KRTTLRPFVSASLNTSSSSSSSTFPSLIQDKPVFASSSPIITPVLREEMG-KGYDEAIEELQKLLREKTELKATAAEKVEQITAQLGTTSSSDGIPKSEASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFI 242          
BLAST of CX295694 vs. ExPASy Swiss-Prot
Match: CAH2_ARATH (Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 1.043e-58
Identity = 115/173 (66.47%), Postives = 129/173 (74.57%), Query Frame = 2
Query:  173 MANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQ--TPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFI 685
            M N+SY                   VAAAKV++ITA+LQ  + SD+K+FD VERIKEGF+ FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDF PG+AFVVRN+AN+VPP+D+ K            LHLKV NIVVIGHSACGGIKGLMSF  DGNNSTDFI
Sbjct:    1 MGNESYEDAIEALKKLLIEKDDLKDVAAAKVKKITAELQAASSSDSKSFDPVERIKEGFVTFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFI 173          
BLAST of CX295694 vs. ExPASy Swiss-Prot
Match: CAH2_FLALI (Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.730e-37
Identity = 74/104 (71.15%), Postives = 81/104 (77.88%), Query Frame = 2
Query:  374 NPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFI 685
            NP LY ELAKGQSPK++VFACSDSRVCPSH+LDFQPGEAFVVRN+AN+VPPYD  K            LHLKV NIVVIGHS CGGIKGLMS   DG  ++DFI
Sbjct:    1 NPTLYGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFI 104          
The following BLAST results are available for this feature:
BLAST of CX295694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
CAHC_ARATH8.785e-7463.33Carbonic anhydrase, chloroplastic OS=Arabidopsis t... [more]
CAHC_TOBAC3.125e-7162.61Carbonic anhydrase, chloroplastic OS=Nicotiana tab... [more]
CAHX_FLABR2.096e-6759.56Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1[more]
CAH1_FLALI2.737e-6759.56Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=... [more]
CAHX_FLABI1.040e-6658.41Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2[more]
CAHX_FLAPR1.358e-6663.68Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1[more]
CAHC_SPIOL3.026e-6659.13Carbonic anhydrase, chloroplastic OS=Spinacia oler... [more]
CAHC_PEA3.953e-6659.40Carbonic anhydrase, chloroplastic OS=Pisum sativum... [more]
CAH2_ARATH1.043e-5866.47Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA... [more]
CAH2_FLALI1.730e-3771.15Carbonic anhydrase 2 (Fragment) OS=Flaveria linear... [more]

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Properties
Property NameValue
Genbank descriptionC05074H08SK DroRLeaf1 Citrus clementina cDNA clone C05074H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295694 ID=CX295694; Name=CX295694; organism=Citrus clementina; type=EST; length=685bp
CTGGTGCCTTACTTCTGTTTCTCAAGCTCAATCCTCTCTCATCAAAAGCT
CCACATTACGTCCCTCCATCGTTGCAAGGCTCAACTCTCCTGCTTCTCCT
CCTAGCCTCATCCGAAACGAGCCCGTTTTTGCTGCACCAGCTCCTATCAT
CAACCCTAACTGGAGGGAAGACATGGCAAATCAGTCGTACGAGGAAGCCA
TTGAAGCTCTCAAGAAACTTCTCAAGGAGAAGGAAGACTTGAAACCTGTT
GCTGCTGCAAAAGTAGAGCAGATTACTGCGCAGCTACAGACTCCATCTGA
CACCAAAGCATTTGATTCCGTGGAGAGGATCAAAGAGGGCTTCATTCACT
TCAAGAGAGAAAAATACGAGAAAAATCCAGCTCTGTACTCTGAGCTCGCC
AAAGGCCAAAGCCCGAAGTATATGGTATTTGCCTGCTCAGACTCCAGGGT
TTGCCCGTCCCATGTGTTGGATTTTCAACCTGGGGAAGCTTTCGTGGTTC
GCAATGTTGCTAACATTGTTCCACCCTATGATCAGACTAAATATGCTGGA
GTTGGAGCTGCTGTCGAGTATGCAGTTTTGCATCTCAAGGTTTCAAACAT
TGTGGTCATTGGGCACAGCGCCTGTGGTGGCATCAAAGGACTCATGTCTT
TCACATTTGATGGAAACAACTCCACCGATTTCATT
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