CX295741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: ISOA1_ARATH (Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.724e-51 Identity = 96/141 (68.09%), Postives = 119/141 (84.40%), Query Frame = 1 Query: 268 RASKSAELETAVIEKP-PSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDE 687 R S AE AV+EKP S RF +S G P+PFG T+RD GVNFS++S+N+VSA++CLI+LSDL++NKVTEEI LD N+TG VWHVFL+GDFKDMLYGY+FDGKFSP+EGHY+D + I+LDPYAKA+ISR +FGVLGPD+ Sbjct: 47 RRSNEAE-NIAVVEKPLKSDRFFISDGLPSPFGPTVRDDGVNFSVYSTNSVSATICLISLSDLRQNKVTEEIQLDPSRNRTGHVWHVFLRGDFKDMLYGYRFDGKFSPEEGHYYDSSNILLDPYAKAIISRDEFGVLGPDD 186
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: ISOA3_ARATH (Isoamylase 3, chloroplastic OS=Arabidopsis thaliana GN=ISA3 PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19 Identity = 54/151 (35.76%), Postives = 83/151 (54.97%), Query Frame = 1 Query: 232 KAFENVTKNLVIRASKSAELETAVIEKPPSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTE----EIALDSFANKTGDVWHVFLKG-DFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFG 669 K + T + R + +E ++ F+VS G +P G + D G+NF++FS NA S +LCL +LS ++ + E+ LD NKTGD WH+ ++ ++LYGY+ DG Q+GH FD + ++LDPYAK V + FG Sbjct: 51 KIKDRSTLKVTCRRAHERVVEEEASTMTETKLFKVSSGEVSPLGVSQVDKGINFALFSQNATSVTLCL-SLSQSGKDDTDDDGMIELVLDPSVNKTGDTWHICVEDLPLNNVLYGYRVDGPGEWQQGHRFDRSILLLDPYAKLVKGHSSFG 200
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_YERE8 (Glycogen debranching enzyme OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=glgX PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.379e-16 Identity = 46/123 (37.40%), Postives = 69/123 (56.10%), Query Frame = 1 Query: 334 VSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRA------QFGVLGPD 684 ++ G PTP GA G+NF++FS++A LCL +N I L + ++GD+WH +L G YGY+ G F+PQ+GH F+P K+++DPYA+A+ + Q GV PD Sbjct: 4 LTSGSPTPMGAHFDGVGINFTLFSAHAEQVELCLF-----DDNNQELRIPLPA---RSGDIWHGYLPGGKPGQRYGYRVSGPFNPQQGHRFNPHKLLIDPYARALDRKVGDDPSLQGGVSQPD 118
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_YERPB (Glycogen debranching enzyme OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=glgX PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.436e-15 Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 334 VSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAV 648 ++ G PTP GA G+NF++FS++A +LCL E +IA+ + +TGD+WH +L G YGY+ G F P GH F+P K+++DP A+A+ Sbjct: 4 LTHGSPTPSGAYFDGKGINFTLFSAHAEQVTLCLF-----DEQGQERQIAMPA---RTGDIWHGYLPGGKPGQRYGYRVSGPFDPSRGHRFNPHKLLIDPRARAL 100
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_YERPY (Glycogen debranching enzyme OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=glgX PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 1 Query: 334 VSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAV 648 ++ G PTP GA G+NF++FS++A +LCL E +IA+ + +TGD+WH +L G YGY+ G F P GH F+P K+++DP +A+ Sbjct: 4 LTHGSPTPSGAYFDGKGINFTLFSAHAEQVTLCLF-----DEQGQERQIAMPA---RTGDIWHGYLPGGKPGQRYGYRVSGPFDPSRGHRFNPHKLLIDPRTRAL 100
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_YERPS (Glycogen debranching enzyme OS=Yersinia pseudotuberculosis GN=glgX PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 1 Query: 334 VSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAV 648 ++ G PTP GA G+NF++FS++A +LCL E +IA+ + +TGD+WH +L G YGY+ G F P GH F+P K+++DP +A+ Sbjct: 4 LTHGSPTPSGAYFDGKGINFTLFSAHAEQVTLCLF-----DEQGQERQIAMPA---RTGDIWHGYLPGGKPGQRYGYRVSGPFDPSRGHRFNPHKLLIDPRTRAL 100
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_YERPP (Glycogen debranching enzyme OS=Yersinia pestis (strain Pestoides F) GN=glgX PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 1 Query: 334 VSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAV 648 ++ G PTP GA G+NF++FS++A +LCL E +IA+ + +TGD+WH +L G YGY+ G F P GH F+P K+++DP +A+ Sbjct: 4 LTHGSPTPSGAHFDGKGINFTLFSAHAEQVTLCLF-----DEQGQERQIAMPA---RTGDIWHGYLPGGKPGQRYGYRVSGPFEPSRGHRFNPHKLLIDPRTRAL 100
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_YERPN (Glycogen debranching enzyme OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=glgX PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 1 Query: 334 VSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAV 648 ++ G PTP GA G+NF++FS++A +LCL E +IA+ + +TGD+WH +L G YGY+ G F P GH F+P K+++DP +A+ Sbjct: 4 LTHGSPTPSGAHFDGKGINFTLFSAHAEQVTLCLF-----DEQGQERQIAMPA---RTGDIWHGYLPGGKPGQRYGYRVSGPFEPSRGHRFNPHKLLIDPRTRAL 100
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_YERPG (Glycogen debranching enzyme OS=Yersinia pestis bv. Antiqua (strain Angola) GN=glgX PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 1 Query: 334 VSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAV 648 ++ G PTP GA G+NF++FS++A +LCL E +IA+ + +TGD+WH +L G YGY+ G F P GH F+P K+++DP +A+ Sbjct: 4 LTHGSPTPSGAHFDGKGINFTLFSAHAEQVTLCLF-----DEQGQERQIAMPA---RTGDIWHGYLPGGKPGQRYGYRVSGPFEPSRGHRFNPHKLLIDPRTRAL 100
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_YERPE (Glycogen debranching enzyme OS=Yersinia pestis GN=glgX PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 1 Query: 334 VSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAV 648 ++ G PTP GA G+NF++FS++A +LCL E +IA+ + +TGD+WH +L G YGY+ G F P GH F+P K+++DP +A+ Sbjct: 4 LTHGSPTPSGAHFDGKGINFTLFSAHAEQVTLCLF-----DEQGQERQIAMPA---RTGDIWHGYLPGGKPGQRYGYRVSGPFEPSRGHRFNPHKLLIDPRTRAL 100 The following BLAST results are available for this feature:
BLAST of CX295741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295741 ID=CX295741; Name=CX295741; organism=Citrus clementina; type=EST; length=710bpback to top |