CX295790

Overview
NameCX295790
Unique NameCX295790
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length553
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX295790 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.414e-16
Identity = 37/42 (88.10%), Postives = 40/42 (95.24%), Query Frame = 3 
Query:   12 EIATRKGCTPSQLALAWVHHQGDDVCPIPGTTKIENFNQNIK 137
            E+A RKGCTPSQLALAWVHHQG+DVCPIPGTTKIEN NQN+K
Sbjct:  261 EMAVRKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNMK 302
The following BLAST results are available for this feature:
BLAST of CX295790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
A115_TOBAC1.414e-1688.10Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
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Properties
Property NameValue
Genbank descriptionC05075H09SK DroRLeaf1 Citrus clementina cDNA clone C05075H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295790 ID=CX295790; Name=CX295790; organism=Citrus clementina; type=EST; length=553bp
ACGAGGGTTATGAAATAGCAACGAGGAAAGGATGCACCCCATCACAGCTT
GCATTAGCATGGGTTCATCACCAGGGAGATGACGTATGTCCGATTCCTGG
AACCACTAAGATTGAGAACTTCAATCAAAATATTAAAGCTCTGTCCGTGA
AACTAACTCTAGAAGAAATGGTGGAACTTGAATCCATTGCTTCAGCAGAT
GCTGTAAAGGGCGATCGGTATGGGGGTAAGGCATCTACTTACGAAGACTC
TGAAACTCCACCTGTGTCTTCATGGAAACCTTCTTAAAGGCCATTGGTAT
CCTGTCATCTTCGACCGTGTTGCACAGTCCTCAAGCATATTGAGAGTTCT
ATAATTGCTATGAGTTCCTATGTTGTGTTTGGAATAAAATCATTGTCTTT
TGCATGTGGATTCTATTTGTATAAGATATAGAGGTTGGATTTAGTGTAAG
CAAAGGATATGAGACACATTAAATAAAACAACACGGCTGTAATATTATTC
TGAAATTTCTGGACCCATTGACGATCCTAAAAAAAAAAAAAAAAAAAAAA
AAA
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