CX295793

Overview
NameCX295793
Unique NameCX295793
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_ARATH (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Arabidopsis thaliana GN=HEMB PE=1 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 3.674e-91
Identity = 168/226 (74.34%), Postives = 182/226 (80.53%), Query Frame = 1
Query:    4 TVMARRLVVTASKSHDGASKKLGISDAECEAAVVAGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRKSPAMRASFQETNLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            T   R LVV AS+S +G +KKLG+SDAECEAAV AGN+                              NR SP  RA+FQET++SPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKAR VGVNS+VLFPKVP+ALK+ TGDEAYNDNGLVPRTI LLKD+YPDL+IYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSP+
Sbjct:   43 TSQRRNLVVRASESGNGHAKKLGMSDAECEAAVAAGNVPEAPPVPPKPAAPVGTPIIKPLNLSRRPRRNRASPVTRAAFQETDISPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARAVGVNSIVLFPKVPEALKNSTGDEAYNDNGLVPRTIRLLKDKYPDLIIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPS 268          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_SOYBN (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Glycine max GN=HEMB PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 3.934e-85
Identity = 155/202 (76.73%), Postives = 169/202 (83.66%), Query Frame = 1
Query:   76 SDAECEAAVVAGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRKSPAMRASFQETNLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            SD+E EAAVVAG +                              NRKSPA+R++FQET++SPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLV+EVAKARDVGVNSVVLFPK+PDALKSPTGDEAYN+NGLVPRTI LLKD+YPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAV+QA+AGADVVSP+
Sbjct:   49 SDSEFEAAVVAGKVPPAPPVRPRPAAPVGTPVVPSLPLHRRPRRNRKSPALRSAFQETSISPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVEEVAKARDVGVNSVVLFPKIPDALKSPTGDEAYNENGLVPRTIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQAQAGADVVSPS 250          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_PEA (Delta-aminolevulinic acid dehydratase, chloroplastic (Fragment) OS=Pisum sativum GN=HEMB PE=2 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 3.682e-83
Identity = 150/202 (74.26%), Postives = 168/202 (83.17%), Query Frame = 1
Query:   76 SDAECEAAVVAGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRKSPAMRASFQETNLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            SD++ EAAVVAG +                              NR+SPA+R++FQET LSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGL++EVAKARDVGVNSVVLFPK+PDALK+PTGDEAYN++GLVPR+I LLKD+YPDL+IYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAV+QARAGADVVSP+
Sbjct:   35 SDSDFEAAVVAGKVPEAPPVPPTPASPAGTPVVPSLPIQRRPRRNRRSPALRSAFQETTLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLLEEVAKARDVGVNSVVLFPKIPDALKTPTGDEAYNEDGLVPRSIRLLKDKYPDLIIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQARAGADVVSPS 236          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_SPIOL (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Spinacia oleracea GN=HEMB PE=1 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 6.500e-80
Identity = 153/222 (68.92%), Postives = 170/222 (76.58%), Query Frame = 1
Query:   19 RLVVTASKSHDGASK-KLGISDAECEAAVVAGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRKSPAMRASFQETNLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            +LVV AS+  D  ++ K G+S  ECEAAVVAGN                               NR SP  RA+FQET LSPAN VYPLFIHEGEEDTPIGAMPGCYRLGWRHGLV+EVAKARDV VNS+V+FPK PDALKSPTGDEAYN+NGLVPRTI +LKD++PDL+IYTDVALDPY  DGHDGIV + GVIMNDETVHQLCKQAV+QARAGADVVSP+
Sbjct:   51 QLVVRASERRDNLTQQKTGLSIEECEAAVVAGNAPSAPPVPPTPKAPSGTPSVSPLSLGRRPRRNRTSPVFRAAFQETTLSPANVVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVEEVAKARDVVVNSIVVFPK-PDALKSPTGDEAYNENGLVPRTIRMLKDKFPDLIIYTDVALDPYYYDGHDGIVTQHGVIMNDETVHQLCKQAVAQARAGADVVSPS 271          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_HORVU (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Hordeum vulgare GN=HEMB PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 6.726e-77
Identity = 146/225 (64.89%), Postives = 166/225 (73.78%), Query Frame = 1
Query:   16 RRLVVTASKSHDGASK---KLGISDAECEAAVVAGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRKSPAMRASFQETNLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            R + V  S   + A+      G S  ECEA  VAG                                NR+SPA+RA+FQET++SPAN V PLFIHEGEED PIGAMPGC+RLGW+HGL+ EV KARDVGVNS VLFPKVPDALKSPTG EAYNDNGLVPRTI LLKD++PD+++YTDVALDPYSSDGHDGIVR+DGVI+NDETV+QLCKQAVSQARAGADVVSP+
Sbjct:   40 RSVAVRVSSEQEAAATVRAPSGRSIEECEADAVAGRFPAPSCVCQTPKAPDGTPEIRPLDMAKRPRRNRRSPALRAAFQETSISPANLVLPLFIHEGEEDAPIGAMPGCFRLGWQHGLLAEVYKARDVGVNSFVLFPKVPDALKSPTGVEAYNDNGLVPRTIRLLKDKFPDIIVYTDVALDPYSSDGHDGIVRKDGVILNDETVYQLCKQAVSQARAGADVVSPS 264          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_ORYSJ (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Oryza sativa subsp. japonica GN=HEMB PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.147e-76
Identity = 135/158 (85.44%), Postives = 149/158 (94.30%), Query Frame = 1
Query:  208 NRKSPAMRASFQETNLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            NR+SPA+RA+FQET +SPAN V PLFIHEGE+D PIGAMPGCYRLGWRHGL+ EV K+RDVGVNS VLFPKVPDALKS +GDEAYNDNGLVPRTI LLKD++PD+V+YTDVALDPYSSDGHDGIVREDGVIMNDETV+QLCKQAVSQARAGADVVSP+
Sbjct:  106 NRRSPALRAAFQETTISPANLVLPLFIHEGEDDAPIGAMPGCYRLGWRHGLLDEVYKSRDVGVNSFVLFPKVPDALKSQSGDEAYNDNGLVPRTIRLLKDKFPDIVVYTDVALDPYSSDGHDGIVREDGVIMNDETVYQLCKQAVSQARAGADVVSPS 263          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_SELMA (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Selaginella martensii GN=HEMB PE=3 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.164e-75
Identity = 141/199 (70.85%), Postives = 154/199 (77.39%), Query Frame = 1
Query:   85 ECEAAVVAGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRKSPAMRASFQETNLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            ECEA VV+GN                               NRKS A+R +FQET L+PANF+ PLFIHEGEED+PIGAMPGC RLGWRHGL+ EV KARDVGVNSVVLFPK+PDALKS TGDEAYN +GLVPR I  LKD++PDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAV+QA AGADVVSP+
Sbjct:   58 ECEADVVSGNPPAAPAAPAKAKAPPGTPVVKPLRLTSRPRRNRKSAALRDAFQETTLTPANFILPLFIHEGEEDSPIGAMPGCSRLGWRHGLIDEVYKARDVGVNSVVLFPKIPDALKSSTGDEAYNPDGLVPRAIRTLKDKFPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQAEAGADVVSPS 256          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_PHYPA (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Physcomitrella patens GN=HEMB PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.091e-74
Identity = 140/199 (70.35%), Postives = 154/199 (77.39%), Query Frame = 1
Query:   85 ECEAAVVAGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRKSPAMRASFQETNLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            ECEA VVAGN                               NR+SPA+RA+FQET +SPANF+ PLF+HEGE++ PIGAMPGC RLGWRHGL+ EV KARDVGVNSVVLFPKVPDALKS TGDEAYN +GLVPR I LLK   PDLVIYTDVALDPYSSDGHDGIVREDG+IMNDETVHQLCKQAV+QA+AGADVVSP+
Sbjct:   72 ECEANVVAGNAPAAPPVPAKPSAPEGTPAISPLVMPARPRRNRRSPALRAAFQETTISPANFILPLFVHEGEQNAPIGAMPGCQRLGWRHGLIDEVYKARDVGVNSVVLFPKVPDALKSSTGDEAYNPDGLVPRCIRLLK-AIPDLVIYTDVALDPYSSDGHDGIVREDGLIMNDETVHQLCKQAVAQAQAGADVVSPS 269          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_CHLRE (Delta-aminolevulinic acid dehydratase, chloroplastic OS=Chlamydomonas reinhardtii GN=HEMB PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.279e-51
Identity = 97/159 (61.01%), Postives = 122/159 (76.73%), Query Frame = 1
Query:  208 NRKSPAMRASFQETNLSPANFVYPLFIHE-GEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            NR+S + RAS +E N+SPANF+ P+FIHE   ++ PI +MPG  RL +   ++  VA+ R  GVN VV+FPK PD LK+ T +EA+N NGL  RTI LLKD +PDL +YTDVALDPY+SDGHDGIV + GVI+NDET+  LC+QAVSQA AGADVVSP+
Sbjct:   63 NRRSESFRASVREVNVSPANFILPIFIHEESNQNVPIASMPGINRLAYGKNVIDYVAEPRSYGVNQVVVFPKTPDHLKTQTAEEAFNKNGLSQRTIRLLKDSFPDLEVYTDVALDPYNSDGHDGIVSDAGVILNDETIEYLCRQAVSQAEAGADVVSPS 221          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_CHLTE (Delta-aminolevulinic acid dehydratase OS=Chlorobium tepidum GN=hemB PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.384e-27
Identity = 72/160 (45.00%), Postives = 102/160 (63.75%), Query Frame = 1
Query:  211 RKSPAMRASFQETNLSPANFVYPLFIHEGE---EDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            R++ A+R   QE  L+  + V+PLF+  G    E+ P  +MPG +R       V+E  +  D+G+ ++ LF  +P+  K+  G EAYNDNG++ + I  +K   P+L I TDVALDP++  GHDG+VR DG+I+NDETV  L K AVS A AGAD VSP+
Sbjct:   17 RRTAALRNLVQENTLTVNDLVFPLFVMPGTNAVEEVP--SMPGSFRFTIDRA-VEECKELYDLGIQAIDLFG-IPEK-KTEDGSEAYNDNGILQQAIRAIKKAVPELCIMTDVALDPFTPFGHDGLVR-DGIILNDETVEVLQKMAVSHAEAGADFVSPS 170          
The following BLAST results are available for this feature:
BLAST of CX295793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
HEM2_ARATH3.674e-9174.34Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_SOYBN3.934e-8576.73Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_PEA3.682e-8374.26Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_SPIOL6.500e-8068.92Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_HORVU6.726e-7764.89Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_ORYSJ1.147e-7685.44Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_SELMA2.164e-7570.85Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_PHYPA9.091e-7470.35Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_CHLRE8.279e-5161.01Delta-aminolevulinic acid dehydratase, chloroplast... [more]
HEM2_CHLTE6.384e-2745.00Delta-aminolevulinic acid dehydratase OS=Chlorobiu... [more]

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Properties
Property NameValue
Genbank descriptionC05075H12SK DroRLeaf1 Citrus clementina cDNA clone C05075H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295793 ID=CX295793; Name=CX295793; organism=Citrus clementina; type=EST; length=696bp
AAAACCGTAATGGCACGTCGTTTGGTTGTTACAGCAAGCAAATCGCACGA
TGGAGCGTCGAAGAAGCTTGGAATCAGTGACGCTGAGTGTGAGGCGGCTG
TTGTGGCGGGAAATATTCCAGAAGCGCCTCCCGTGCCACCAAAGCCTGCC
GCGCCAGCTGGAACTCCTGTAGTTCCTTCTCTTCCACTTAGTCGGCGGCC
TCGCCGTAATAGGAAGTCCCCCGCAATGAGAGCATCCTTCCAGGAAACAA
ATCTTTCACCGGCAAATTTTGTATATCCACTTTTTATTCATGAAGGAGAG
GAGGACACGCCTATTGGGGCCATGCCCGGTTGTTATAGACTTGGTTGGAG
ACATGGACTTGTTCAAGAGGTGGCGAAAGCACGGGATGTTGGTGTGAATA
GTGTTGTGCTCTTCCCCAAAGTTCCAGATGCTTTGAAGTCTCCCACAGGA
GATGAAGCATACAATGATAATGGTCTGGTGCCTCGTACAATATGGCTGCT
CAAGGATAGATACCCTGATCTTGTAATTTACACTGATGTTGCTTTAGATC
CATATTCCTCTGATGGGCATGATGGTATTGTCAGAGAAGACGGAGTCATT
ATGAATGATGAAACAGTGCATCAATTATGTAAACAAGCTGTGTCCCAGGC
CCGTGCTGGAGCAGATGTTGTGAGTCCAGCGATATGATGGATGGTC
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