CX295825

Overview
NameCX295825
Unique NameCX295825
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length762
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_DESHY (5'-nucleotidase surE OS=Desulfitobacterium hafniense (strain Y51) GN=surE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.966e-17
Identity = 47/102 (46.08%), Postives = 63/102 (61.76%), Query Frame = 2
Query:  317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622
            +L+TN DG  +PGL  L   L   G Y+V + AP S KS +GHS+TL E + ++   ++  T Y VSG P DCV LA+ G++    KP LVISGIN G + G
Sbjct:    3 ILLTNDDGYFAPGLQTLYTTLAEAG-YDVFIVAPDSQKSATGHSITLFEPLFITKHSLDRGTGYAVSGKPADCVKLAIQGSII--PKPDLVISGINNGPNLG 101          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_DESHD (5'-nucleotidase surE OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=surE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.966e-17
Identity = 47/102 (46.08%), Postives = 63/102 (61.76%), Query Frame = 2
Query:  317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622
            +L+TN DG  +PGL  L   L   G Y+V + AP S KS +GHS+TL E + ++   ++  T Y VSG P DCV LA+ G++    KP LVISGIN G + G
Sbjct:    3 ILLTNDDGYFAPGLQTLYTTLAEAG-YDVFIVAPDSQKSATGHSITLFEPLFITKHSLDRGTGYAVSGKPADCVKLAIQGSII--PKPDLVISGINNGPNLG 101          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_CAMJR (5'-nucleotidase surE OS=Campylobacter jejuni (strain RM1221) GN=surE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.214e-15
Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 2
Query:  317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEV-SGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622
            +L+TN DG ES GL  L++ L +E    + + AP S+KS   HS+TL + +        G   Y++  GTP DCV LAL  AL+    P LVISGIN+G++ G
Sbjct:    4 ILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSACSHSITLTKPLRFVKV---GKRFYKLDDGTPADCVYLALH-ALYKKRLPDLVISGINKGANVG 102          

HSP 2 Score: 30.0314 bits (66), Expect = 2.214e-15
Identity = 14/39 (35.90%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  627 TCVVAGAREALICGVPSLSISLNWKKDEARE*FQDAVSV 743
            TC  AGA EA++ G+P++++S  +KK E    +++A+ +
Sbjct:  110 TC--AGAMEAVLQGIPAIALSQFYKKSEKELDYKNALQI 146          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_CAMJJ (5'-nucleotidase surE OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=surE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.214e-15
Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 2
Query:  317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEV-SGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622
            +L+TN DG ES GL  L++ L +E    + + AP S+KS   HS+TL + +        G   Y++  GTP DCV LAL  AL+    P LVISGIN+G++ G
Sbjct:    4 ILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSACSHSITLTKPLRFVKV---GKRFYKLDDGTPADCVYLALH-ALYKKRLPDLVISGINKGANVG 102          

HSP 2 Score: 30.0314 bits (66), Expect = 2.214e-15
Identity = 14/39 (35.90%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  627 TCVVAGAREALICGVPSLSISLNWKKDEARE*FQDAVSV 743
            TC  AGA EA++ G+P++++S  +KK E    +++A+ +
Sbjct:  110 TC--AGAMEAVLQGIPAIALSQFYKKSEKELDYKNALQI 146          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_CAMJE (5'-nucleotidase surE OS=Campylobacter jejuni GN=surE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.214e-15
Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 2
Query:  317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEV-SGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622
            +L+TN DG ES GL  L++ L +E    + + AP S+KS   HS+TL + +        G   Y++  GTP DCV LAL  AL+    P LVISGIN+G++ G
Sbjct:    4 ILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSACSHSITLTKPLRFVKV---GKRFYKLDDGTPADCVYLALH-ALYKKRLPDLVISGINKGANVG 102          

HSP 2 Score: 30.0314 bits (66), Expect = 2.214e-15
Identity = 14/39 (35.90%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  627 TCVVAGAREALICGVPSLSISLNWKKDEARE*FQDAVSV 743
            TC  AGA EA++ G+P++++S  +KK E    +++A+ +
Sbjct:  110 TC--AGAMEAVLQGIPAIALSQFYKKSEKELDYKNALQI 146          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_CAMJ8 (5'-nucleotidase surE OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=surE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.214e-15
Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 2
Query:  317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEV-SGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622
            +L+TN DG ES GL  L++ L +E    + + AP S+KS   HS+TL + +        G   Y++  GTP DCV LAL  AL+    P LVISGIN+G++ G
Sbjct:    4 ILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSACSHSITLTKPLRFVKV---GKRFYKLDDGTPADCVYLALH-ALYKKRLPDLVISGINKGANVG 102          

HSP 2 Score: 30.0314 bits (66), Expect = 2.214e-15
Identity = 14/39 (35.90%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  627 TCVVAGAREALICGVPSLSISLNWKKDEARE*FQDAVSV 743
            TC  AGA EA++ G+P++++S  +KK E    +++A+ +
Sbjct:  110 TC--AGAMEAVLQGIPAIALSQFYKKSEKELDYKNALQI 146          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_FLAPJ (5'-nucleotidase surE OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=surE PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.241e-15
Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 2
Query:  305 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVS--SAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSS 616
            SKP++LVTN DGI +PG+  L+  +   G   V V AP S +S  GH++T+  T+ ++  SAE    T Y  SGTPVDCV LA++  L    KP L +SG+N GS+
Sbjct:    2 SKPLILVTNDDGISAPGIRSLIAVMQEIG--TVVVVAPDSPQSAMGHAITINSTLHLNKISAENAAVTEYSCSGTPVDCVKLAVNEIL--KQKPDLCVSGVNHGSN 103          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE2_CHLCV (5'-nucleotidase surE 2 OS=Chlamydophila caviae GN=surE2 PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 4.845e-15
Identity = 43/107 (40.19%), Postives = 69/107 (64.49%), Query Frame = 2
Query:  317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAE--INGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHM 631
            +L+TN DGI +PG+  LV  L++    ++++ AP++++S    ++T  E + +   +  +  A A+ VSGTPVDCV +AL+  LF    P LV+SGINRGS+ G H+
Sbjct:   14 ILLTNDDGIFAPGMTLLVSNLLKADFADLYIVAPKTEQSAKSMAMTFHEPVILQPYDYPLPVAGAWSVSGTPVDCVRIALA-YLFKDELPDLVLSGINRGSNAGRHV 119          

HSP 2 Score: 21.557 bits (44), Expect = 4.845e-15
Identity = 7/18 (38.89%), Postives = 14/18 (77.78%), Query Frame = 3
Query:  636 VAGAREALICGVPSLSIS 689
            +  A E+ +CGVP++++S
Sbjct:  125 LGAAIESTLCGVPAVALS 142          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_CYTH3 (5'-nucleotidase surE OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=surE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.897e-14
Identity = 48/105 (45.71%), Postives = 65/105 (61.90%), Query Frame = 2
Query:  305 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEI-NGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSS 616
            SKP++LV N DGI S G+  L+E +   G   V V AP S +S  GH++T+  T+ + ++++  G  AYE SGTP DCV LA    L    KP LV+SGIN GS+
Sbjct:    2 SKPLILVCNDDGIFSVGIRTLIEVMSELG--EVVVVAPDSPQSGMGHAITIGNTLRLEASDLFPGIVAYECSGTPADCVKLAKHHVL-KGRKPDLVVSGINHGSN 103          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_DESAD (5'-nucleotidase surE OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=surE PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.236e-14
Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = 2
Query:  317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622
            +L+TN DGI++ GL  L   L R G+ NV V AP +++S  GH+V+L   + V   E +G T   V GTPVDCV L L+  L   +KP +V+SGIN G++ G
Sbjct:    3 ILLTNDDGIQAVGLRALYHGLKRAGM-NVQVVAPVAEQSAVGHAVSLSSPLRVKKFEEDGFTGLGVYGTPVDCVKLGLTTLL--ETKPDIVVSGINSGANVG 101          
The following BLAST results are available for this feature:
BLAST of CX295825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
SURE_DESHY6.966e-1746.085'-nucleotidase surE OS=Desulfitobacterium hafnien... [more]
SURE_DESHD6.966e-1746.085'-nucleotidase surE OS=Desulfitobacterium hafnien... [more]
SURE_CAMJR2.214e-1542.725'-nucleotidase surE OS=Campylobacter jejuni (stra... [more]
SURE_CAMJJ2.214e-1542.725'-nucleotidase surE OS=Campylobacter jejuni subsp... [more]
SURE_CAMJE2.214e-1542.725'-nucleotidase surE OS=Campylobacter jejuni GN=su... [more]
SURE_CAMJ82.214e-1542.725'-nucleotidase surE OS=Campylobacter jejuni subsp... [more]
SURE_FLAPJ2.241e-1545.285'-nucleotidase surE OS=Flavobacterium psychrophil... [more]
SURE2_CHLCV4.845e-1540.195'-nucleotidase surE 2 OS=Chlamydophila caviae GN=... [more]
SURE_CYTH31.897e-1445.715'-nucleotidase surE OS=Cytophaga hutchinsonii (st... [more]
SURE_DESAD3.236e-1445.105'-nucleotidase surE OS=Desulfovibrio salexigens (... [more]

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Properties
Property NameValue
Genbank descriptionC05076C08SK DroRLeaf1 Citrus clementina cDNA clone C05076C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295825 ID=CX295825; Name=CX295825; organism=Citrus clementina; type=EST; length=762bp
GAGGCATCTCTCTTTTTCATTAAACACGCTTCTCTCTCTCTTTAGGGTTT
TGTTTTGTCCAATTTCTCTGCTCAAAAAAGCACTTCAATTTGAAAAAAAA
GAAAAGGGAAACATGACTTCTGTGAGAAACAACTTAATGCCTCCAGGTCT
TGTGTCTAACCTGGAACAAGTGCTTTTAAACAAGAAGAAGAAGAGTAAAG
ACAATGAAGATGATGGTGATGATGGCACCAGTAAGCAATCAAACGAAGAG
GCCAATGAATCAACGGAGCCCTCTACTTCTGATTCGACGGAGAATGTTGA
TAGTTCAAAGCCTGTGCTTTTGGTCACAAATGGGGATGGAATTGAGTCTC
CTGGCCTTGTTTATCTTGTTGAAGCTTTGGTTCGTGAAGGGCTCTACAAT
GTCCACGTTTGCGCTCCTCAATCGGACAAATCAGTGTCAGGTCATTCTGT
GACACTCCGAGAAACGATTGCTGTAAGTTCTGCTGAAATTAATGGTGCCA
CAGCGTATGAAGTTTCAGGGACTCCTGTGGATTGTGTGTCATTAGCACTA
TCTGGGGCACTATTTTCTTGGTCAAAGCCTTTGCTGGTAATTAGTGGAAT
CAACCGAGGTTCAAGCTGTGGTCATCACATGTGTTGTTGCCGGAGCCAGA
GAGGCATTAATTTGTGGTGTACCTTCTCTGTCCATATCCCTAAACTGGAA
GAAAGATGAAGCCAGAGAGTGATTTCAGGATGCAGTCAGTGTCTGTTTAC
CTTGATAATGCT
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