CX295839
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295839 vs. ExPASy Swiss-Prot
Match: FBW2_ARATH (F-box protein FBW2 OS=Arabidopsis thaliana GN=FBW2 PE=1 SV=1) HSP 1 Score: 329.717 bits (844), Expect = 9.201e-90 Identity = 162/228 (71.05%), Postives = 190/228 (83.33%), Query Frame = 1 Query: 22 MEGESEFRHWDELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRC-QPDHLDRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVK 702 ME + EFRHWDELIPDALGLIF +L LQEVLTV+P VCK+W RAV GPYCWQEIDIE WSNR Q DHLDRM+EMLI RS+GSLRKL V+GL ND +FS IA++AGSL+TL++PRS +++S V +A +LS++TFLDLSYC KIG A++AIGKHCK L CRNMHPLD A +S DDEA AIA+TMPKLKRLE+AYH +STE VLKILS C LEFL+LRGCWDV+ Sbjct: 1 MEEDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNRFHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSGVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAYAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQ 228
BLAST of CX295839 vs. ExPASy Swiss-Prot
Match: SKI19_ARATH (F-box protein SKIP19 OS=Arabidopsis thaliana GN=SKIP19 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.686e-22 Identity = 73/223 (32.74%), Postives = 115/223 (51.57%), Query Frame = 1 Query: 37 EFRHWDELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDH-LDRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV 699 E +W EL P+ I L E+L VC+SWRR P W++ID+ + D+ L+ M + RS G L + + + + IA + +L++LRL R S+++D + +L + L+LSYCS +L +G+ C + L N HP + DD+A AIA TMPKL+ L++ + +S + IL +C+ LE LDLR C++V Sbjct: 15 ESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGFVEAVVKLP-LEELELSYCS-FSVESLRVVGQCCLNMKTLKLNKHP-----QKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNV 230
BLAST of CX295839 vs. ExPASy Swiss-Prot
Match: FBL23_ARATH (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana GN=FBL23 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.450e-20 Identity = 67/225 (29.78%), Postives = 113/225 (50.22%), Query Frame = 1 Query: 31 ESEFRHWDELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDH-LDRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV 699 + + R+W EL I L E+L VCK W R P W++IDI+ ++R + L+ M + RS G L ++ + + + IA+ + +L++L L R ++D VA+ ++ + +L++SYC G +L IG+ C L L N P DD A AIA +MP+L+ L++ + ++ + + IL C LE LDLR C+++ Sbjct: 175 DKKLRNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAAFKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLFSGE-SLRDIGRSCPNLKTLKLNRAPEIMFSNSGFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNI 398
BLAST of CX295839 vs. ExPASy Swiss-Prot
Match: SKIP1_ARATH (F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKIP1 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19 Identity = 76/243 (31.28%), Postives = 114/243 (46.91%), Query Frame = 1 Query: 31 ESEFRHWDELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIEEW-SNRCQPDHL---------DRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMH----------PLDTADKLSQ--DDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGC 690 E + W L P+ L I L++QE+ T V KSW PY W D+E W + + HL D M+ ++ S G L K+ V +D S A+ +LQ L + S ++D+ + +IA R ++ LD+SYC +I L IG++C L +L RN+ P + D Q D EA+AI M L+ LE+ + +S + + I C LE+LDL GC Sbjct: 2 EEDGSDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYPESTHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHC-SDHALSYAADRCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRHIGSVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGC 243
BLAST of CX295839 vs. ExPASy Swiss-Prot
Match: FBL9_ARATH (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana GN=FBL9 PE=4 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17 Identity = 70/226 (30.97%), Postives = 106/226 (46.90%), Query Frame = 1 Query: 37 EFRHWDELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDHLDRMVEMLITR----SSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLR-LPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV 699 E+R+W EL P+ I L E+L VCKSWRR P W++IDI N L ++E L R S G L ++ + L N + IA+ + +L+ L + + + V + A +L + LD++Y S I L+ +G+ C L L N T D D A AIA TMP L+ L++ + +S + IL C L+ L L C ++ Sbjct: 17 EYRNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNC----TGDVKCCDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNI 238
BLAST of CX295839 vs. ExPASy Swiss-Prot
Match: FBL22_ARATH (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana GN=FBL22 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.155e-16 Identity = 65/232 (28.02%), Postives = 108/232 (46.55%), Query Frame = 1 Query: 22 MEGESEFRHWDELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDHLDRMVEMLITRSSGSLRKLCVS--GLHNDMMFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLS----QDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV 699 M+GE + +W EL PD L I LS E+L VC+SWRR P W+ ID+ ++ ++ S G L + + + + +AE + +L+ LR+ +++ + + +L + L+L YCS +E +H K + C N+ L S D++A AIA TMP L L++ + ++ + IL C LE LDLR C+++ Sbjct: 18 MKGEEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRLYCIYAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLRVKGGQITSVGIFEAIVKLPLLEELELLYCS------IEE--EHFKTIGQACPNLKTLKLVGFWSHLNESDNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNI 241
BLAST of CX295839 vs. ExPASy Swiss-Prot
Match: FB221_ARATH (Putative F-box protein At4g05480 OS=Arabidopsis thaliana GN=At4g05480 PE=4 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.516e-12 Identity = 67/246 (27.24%), Postives = 119/246 (48.37%), Query Frame = 1 Query: 4 YLKVD*MEGESEFRHWDELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDHLD--RMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSE-MSDSIVAQIAGRLSAVTFLDLSYCS-KIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQ---------DDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCA-LLEFLDLRGCWDV 699 +LK D + E +W +L P+ I LS+ ++L +C++WRR P W++I++ + C D M ++ S G L ++ + +D + S I + + +L++L + E M++ V +L + L + + S K+ L+AIG C L L N + A +SQ DD+A AIA +MPKL+ L++ + ++ + IL C L E LD+R C+++ Sbjct: 29 FLKKD----DEERINWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKINLRD----CLMYEFDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPMTNKGVMNGIEKLPLLETLVIFHSSIKLD---LKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECDDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNI 263
BLAST of CX295839 vs. ExPASy Swiss-Prot
Match: FBL21_ARATH (Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana GN=FBL21 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 65/238 (27.31%), Postives = 106/238 (44.54%), Query Frame = 1 Query: 37 EFRHWDELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDHLD--RMVEMLITRSSGSLRKLCVSG-LHNDMMFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSY-CSKIGAPALEAIGKHCKLLVVLCRNM-------------HPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV 699 E R+W +L P+ I LSL ++L VCK WRR P W++I+ + C + D M ++ S G L ++ V +D + S I + L + ++ V ++ + L++++ C K+ L+AIG C L L N + LD L DD+A AIA +MPKL L++ + ++ + IL C LE LD+R C+ + Sbjct: 42 ERRNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKINTRD----CLMYNFDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITDRNLRSLGLGMCFPRVTKLGVVNAIAKIPLLETLEVTHSCIKLD---LKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRI 272
BLAST of CX295839 vs. ExPASy Swiss-Prot
Match: FBL19_ARATH (Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana GN=FBL19 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 63/246 (25.61%), Postives = 105/246 (42.68%), Query Frame = 1 Query: 28 GESEFRHWDELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIE----------EWSNRCQPDHLDRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHP---------LDTADKLSQ-----DDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGC 690 G + W EL + L IF LS ++ V K+W A P D+E W D +D + ++ RS G L ++ + + S AE +L+ L + ++D+ + +IA + LD+SY I +L +G+ C+ L +L RN+ P + D L+ + EA I M +LK LE+ Y ++ + + C+ LE++DLRGC Sbjct: 13 GSGLYPDWSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFDLETRFLSFPESINWWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHC-TERSLSYAAERCPNLEVLWIKNCPNVTDASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTIVAPLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRGC 257 The following BLAST results are available for this feature:
BLAST of CX295839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295839 ID=CX295839; Name=CX295839; organism=Citrus clementina; type=EST; length=703bpback to top |