CX295879
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295879 vs. ExPASy Swiss-Prot
Match: DPS1_DICDI (Decaprenyl-diphosphate synthase OS=Dictyostelium discoideum GN=coq1 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.005e-17 Identity = 45/122 (36.89%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 4 GLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDEDVTKSRRALLDLTHRVITRNK 369 GLA+Q++DD+LD+TG++ GK + D+ G+ TAP+L+A +EFPQL ++++ F + +V+ A + S+GI+KTR L + LP+ ++SR L+ L+H V+TR K Sbjct: 341 GLAFQIVDDLLDYTGSAEECGKATSVDLTLGLATAPVLYATQEFPQLEKLIKRKFSEIGDVEEAKRLVALSKGIEKTRNLAIEYCNRAIQSLLKLPQ------SESRDLLITLSHIVVTRTK 456
BLAST of CX295879 vs. ExPASy Swiss-Prot
Match: DPS1_MOUSE (Decaprenyl-diphosphate synthase subunit 1 OS=Mus musculus GN=Pdss1 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.100e-15 Identity = 45/122 (36.89%), Postives = 72/122 (59.02%), Query Frame = 1 Query: 4 GLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDEDVTKSRRALLDLTHRVITRNK 369 G+A+QLIDDVLDFT S +GK + +D++ GI T P+LFA ++FP++ ++ + F +VD A +Y+ +S G+Q+T L I L + + D AL+ L+ V+TR+K Sbjct: 294 GIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFACQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIRKLRPSTERD------ALIQLSESVLTRDK 409
BLAST of CX295879 vs. ExPASy Swiss-Prot
Match: PREA_CYAPA (Prenyl transferase OS=Cyanophora paradoxa GN=preA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.876e-15 Identity = 36/105 (34.29%), Postives = 69/105 (65.71%), Query Frame = 1 Query: 4 GLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDEDVTK 318 GLA+Q++DD+LDFT ++ LGK S SD++ G +TAP+LFA+E+ +L ++++ F + + + L+ + +++ I+KTREL +++LP ++ ++ K Sbjct: 208 GLAFQIVDDILDFTSSTEELGKPSCSDLKKGNLTAPVLFALEQNSELIPLIQRQFSEPKDFEYTLQIVEETKAIEKTRELAMEHAQVAIQCLENLPPSSSKEALK 312
BLAST of CX295879 vs. ExPASy Swiss-Prot
Match: DPS1_HUMAN (Decaprenyl-diphosphate synthase subunit 1 OS=Homo sapiens GN=PDSS1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.200e-15 Identity = 44/122 (36.07%), Postives = 72/122 (59.02%), Query Frame = 1 Query: 4 GLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDEDVTKSRRALLDLTHRVITRNK 369 G+A+QLIDDVLDFT S +GK + +D++ G+ T P+LFA ++FP++ ++ + F +VD A +Y+ +S G+Q+T L I L + + D AL+ L+ V+TR+K Sbjct: 300 GIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLRPSPERD------ALIQLSEIVLTRDK 415
BLAST of CX295879 vs. ExPASy Swiss-Prot
Match: PREA_PORPU (Prenyl transferase OS=Porphyra purpurea GN=preA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.709e-14 Identity = 44/120 (36.67%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 4 GLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDEDVTKSRRALLDLTHRVITR 363 GLA+Q++DDVLD G++ SLGK S +D +G +TAPILFA+ + +L ++++ F D ++ +AL + KS GI K ++L + LP++ +L +LTH +ITR Sbjct: 208 GLAFQIMDDVLDIAGSTKSLGKPSGADFMNGNLTAPILFALTQEGKLDQLIQREFSDERDISLALFLIKKSGGITKAKDLAKEQVQAALCCLQFLPKSAPVS------SLKELTHFIITR 321
BLAST of CX295879 vs. ExPASy Swiss-Prot
Match: PREA_SYNY3 (Prenyl transferase OS=Synechocystis sp. (strain PCC 6803) GN=preA PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 3.538e-14 Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 4 GLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDEDVTKSRRALLDLTHRVITR 363 GLA+Q++DD+LDFT + LGK + SD+ G ITAP LFAME++P L ++E+ F + +++ ALE + + GI+++REL + L +++ R +LL+L V+ R Sbjct: 208 GLAFQIVDDILDFTSPTEVLGKPAGSDLISGNITAPALFAMEKYPLLGKLIEREFAQAGDLEQALELVEQGDGIRRSRELAANQAQLARQHLSVL------EMSAPRESLLELVDYVLGR 321
BLAST of CX295879 vs. ExPASy Swiss-Prot
Match: COQ1_YEAST (Hexaprenyl pyrophosphate synthetase, mitochondrial OS=Saccharomyces cerevisiae GN=COQ1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.036e-14 Identity = 45/123 (36.59%), Postives = 72/123 (58.54%), Query Frame = 1 Query: 4 GLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXI-DSLPENNDEDVTKSRRALLDLTHRVITRNK 369 G+ +QL+DD+LDFT + LGK S +D++ GI TAP+LFA +E P L ++ + F + +V+ ++ + GI KT+ L + DSLPE++ +R AL LT+ ++TR K Sbjct: 357 GICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFAWKEDPSLGPLISRNFSERGDVEKTIDSVRLHNGIAKTKILAEEYRDKALQNLRDSLPESD------ARSALEFLTNSILTRRK 473
BLAST of CX295879 vs. ExPASy Swiss-Prot
Match: COQ1_YARLI (Probable hexaprenyl pyrophosphate synthetase, mitochondrial OS=Yarrowia lipolytica GN=COQ1 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.036e-14 Identity = 40/122 (32.79%), Postives = 76/122 (62.30%), Query Frame = 1 Query: 4 GLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDEDVTKSRRALLDLTHRVITRNK 369 GL +Q++DD+LD++ + LGK + +D++ G+ TAP+LFA E++P+L ++++ F+ +V+ A + ++ G+ +TREL +D LP ++SR AL +LT +++ R+K Sbjct: 337 GLCFQVVDDMLDYSEGESHLGKPAGADLKLGLATAPVLFAWEKYPELGDMIKRKFDGPGDVERARFLVQQADGLSRTRELAQKYCDEAVANLDLLP------YSESREALRNLTMKMMNRSK 452
BLAST of CX295879 vs. ExPASy Swiss-Prot
Match: COQ1_NEUCR (Probable hexaprenyl pyrophosphate synthetase, mitochondrial OS=Neurospora crassa GN=NCU02305 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.109e-13 Identity = 41/122 (33.61%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 4 GLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDEDVTKSRRALLDLTHRVITRNK 369 GLA+QL+DD+LD+T + LGK + +D+ G+ TAP+LFA + P+L +V + FE + A E + +S GI++TR L I P++ +D L+++ + + RNK Sbjct: 334 GLAFQLVDDMLDYTRSEKELGKPAGADLELGLATAPLLFAWKTMPELGPLVGRKFEKEGDAARARELVLQSNGIEQTRALAQDYAEKAIEAISGFPDSEAKD------GLIEMAVKTLKRNK 449
BLAST of CX295879 vs. ExPASy Swiss-Prot
Match: PREA_CYACA (Prenyl transferase OS=Cyanidium caldarium GN=preA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.715e-13 Identity = 37/122 (30.33%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 4 GLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDEDVTKSRRALLDLTHRVITRNK 369 GLA+Q+IDD+LD T +S +LGK + SD++ G +TAP+LFA+ + +L ++E+ F + S++ A+ + ++ I+++ +L I LP ++++D +L+++ + ++ R K Sbjct: 208 GLAFQIIDDILDITSSSTALGKMTTSDLKLGNLTAPVLFALTKNSKLFKIIEREFCEKSDISEAINIIKETNAIEESFDLAYEHIEAAINSIKDLPTSSEKD------SLIEIAYDLLNRYK 323 The following BLAST results are available for this feature:
BLAST of CX295879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295879 ID=CX295879; Name=CX295879; organism=Citrus clementina; type=EST; length=597bpback to top |