CX296270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296270 vs. ExPASy Swiss-Prot
Match: TM165_HUMAN (Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.953e-15 Identity = 47/100 (47.00%), Postives = 65/100 (65.00%), Query Frame = 2 Query: 314 SGLEVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRILYIAWMSDPKSGQ 613 + L AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS G +I R +T +TVL+A FG+R+L P GQ Sbjct: 89 TNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFG-YATTVIPRVYTYYVSTVLFAIFGIRMLREGLKMSPDEGQ 187
BLAST of CX296270 vs. ExPASy Swiss-Prot
Match: TM165_RAT (Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.352e-15 Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 2 Query: 314 SGLEVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRILYIAWMSDPKSGQ 613 + L AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS G +I R +T +T L+A FG+R+L P GQ Sbjct: 89 ANLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFG-YATTVIPRVYTYYVSTALFAIFGIRMLREGLKMSPDEGQ 187
BLAST of CX296270 vs. ExPASy Swiss-Prot
Match: TM165_MOUSE (Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 4.352e-15 Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 2 Query: 314 SGLEVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRILYIAWMSDPKSGQ 613 + L AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS G +I R +T +T L+A FG+R+L P GQ Sbjct: 89 TNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFG-YATTVIPRVYTYYVSTALFAIFGIRMLREGLKMSPDEGQ 187
BLAST of CX296270 vs. ExPASy Swiss-Prot
Match: YD68_SCHPO (UPF0016 membrane protein C17G8.08c OS=Schizosaccharomyces pombe GN=SPAC17G8.08c PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.185e-12 Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 2 Query: 335 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRIL 577 + I S SMI EIGD+TFI+AAL+A + + TV +G+ SALF+MT+L LG P L RK T+ VL+ FG+++L Sbjct: 49 SLIFSISMIFGCEIGDKTFIVAALLAFENSRLTVFAGSYSALFIMTLLGVLLGHAAPLLFPRKLTDILGGVLFVIFGIKML 129
BLAST of CX296270 vs. ExPASy Swiss-Prot
Match: YB37_YEAST (UPF0016 membrane protein YBR187W OS=Saccharomyces cerevisiae GN=YBR187W PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.003e-11 Identity = 36/80 (45.00%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 335 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRI 574 +F+ S SMI +SEIGD+TF+IAALMAMRH + V S A ++L +MT+LS +G +S ++T A +L+ FG ++ Sbjct: 41 SFLMSVSMIGLSEIGDKTFLIAALMAMRHKRVLVFSAAATSLAIMTILSGVVGHSAVAFLSERYTAFFAGILFLVFGYKL 120 The following BLAST results are available for this feature:
BLAST of CX296270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296270 ID=CX296270; Name=CX296270; organism=Citrus clementina; type=EST; length=614bpback to top |