CX296317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_CUCSA (Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus GN=PSAL PE=2 SV=1) HSP 1 Score: 312.768 bits (800), Expect = 1.106e-84 Identity = 154/218 (70.64%), Postives = 178/218 (81.65%), Query Frame = 1 Query: 1 MASVSSPMASQLKSSFTSPVSRSLLTPRGISGSPFRVVPSKRSPRFIVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNLPYFVK 654 MA+ +SP ASQL SSF S +R+L++P+G+S SP R +P+ R+ F ++AIQ++KPT+QVIQPINGDPFIGSLETP+TSSPLIAWYLSNLPAYRTAVSPLLRG+EVGLAHGF LVGPFVKAGPLRNT +VILS+CLT+YG+ASFNEGEPSTAP LTLTGRKK PD LQTADGWAK ISGVIWAYFLLYVL+LPY+VK Sbjct: 1 MATATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPT-RTHSFTIRAIQADKPTFQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAGPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_ARATH (Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana GN=PSAL PE=1 SV=2) HSP 1 Score: 309.686 bits (792), Expect = 9.364e-84 Identity = 156/219 (71.23%), Postives = 177/219 (80.82%), Query Frame = 1 Query: 1 MASVSSPMASQLKSSFTSP-VSRSLLTPRGISGSPFRVVPSKRSPRFIVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNLPYFVK 654 MA+ +SPMASQL+SSF+S +S+ L P+GISG+PF V P+KR F V+A++S+K T+QV+QPINGDPFIGSLETP+TSSPLIAWYLSNLP YRTAV+PLLRGVEVGLAHGF LVGPFVKAGPLRNT VVILS+CLTIYGI+SF EGEPS AP LTLTGRKK+PDQLQTADGWAK ISGV WAYFLLYVL+LPYFVK Sbjct: 1 MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQVVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQLQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_SPIOL (Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea GN=PSAL PE=1 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 1.266e-80 Identity = 152/219 (69.41%), Postives = 174/219 (79.45%), Query Frame = 1 Query: 1 MASVSSPMASQLKSSFTSPVSRSLLTPRGISGSPFRVVPS-KRSPRFIVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNLPYFVK 654 MA+ +SPMASQLKS FT+ ++L+ P+GISG R PS +R F V+AI++EKPTYQVIQP+NGDPFIG LETP+TSSPLIAWYLSNLPAYRTAV+PLLRGVEVGLAHGFLLVGPFVKAGPLRNTE VVILS+CLT+YGIASF EGEPS AP LTLTGRKK+PDQLQ+ADGWAK +SGV WA FL+YVL+LPY+ K Sbjct: 1 MAATTSPMASQLKSGFTT---KALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQVIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQSADGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK 216
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_HORVU (Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare GN=PSAL PE=1 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.147e-73 Identity = 137/212 (64.62%), Postives = 161/212 (75.94%), Query Frame = 1 Query: 19 PMASQLKSSFTSPVSRSLLTPRGISGSPFRVVPSKRSPRFIVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNLPYFVK 654 PMASQ+ S + PRG+SG+ R PRF+VKA++S+KPTYQV+QPINGDPFIGSLETP+TSSPL+AWYLSNLPAYRTAVSPLLRG+EVGLAHG+LLVGPF GPLRNT + V ILS+CLT+YG+ASFNEGEPSTAP LTLTGRKKE D+LQTA+GW++ +SG +WAYFLLYVL+LPYF K Sbjct: 8 PMASQVMKS-----GLACSKPRGMSGASLT-----RRPRFVVKAVKSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQFTGGFFFGGVSGAVWAYFLLYVLDLPYFFK 209
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_GUITH (Photosystem I reaction center subunit XI OS=Guillardia theta GN=psaL PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.864e-29 Identity = 63/150 (42.00%), Postives = 86/150 (57.33%), Query Frame = 1 Query: 175 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLL 624 Q ++P N DPF+G+L TPIT+S LSNLPAYR +SPLLRG+E+G+ HG+ LVGPF K GPLRN+E+ ++I++ CL IYG+ SFN + +QLQ+A GW + I G +AY L+ Sbjct: 3 QFVKPYNDDPFVGNLATPITTSSFTRTLLSNLPAYRAGLSPLLRGLEIGMTHGYFLVGPFYKLGPLRNSEVALLAGVFSALGLIIIMAACLAIYGVVSFNTNDGG--------------EQLQSAKGWRQFTSGWLVGSIGGASFAYILI 138
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_CYACA (Photosystem I reaction center subunit XI OS=Cyanidium caldarium GN=psaL PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.505e-28 Identity = 60/148 (40.54%), Postives = 86/148 (58.11%), Query Frame = 1 Query: 181 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLL 624 I+P +PF+G+L TP+ SS + WYL NLP YR +SPLLRG+E+G+AHG+ ++GPF K GPLRNT++ ++I SI + IYGI +F+ E + D+LQTA+GW + + G +AY LL Sbjct: 5 IKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIGPFYKLGPLRNTDLSLLSGLIAAIGLIIISSIAMIIYGIVTFDNSENN--------------DKLQTANGWRQLASGFLLGAVGGAGFAYILL 138
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_THEEB (Photosystem I reaction center subunit XI OS=Thermosynechococcus elongatus (strain BP-1) GN=psaL PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.769e-27 Identity = 56/150 (37.33%), Postives = 90/150 (60.00%), Query Frame = 1 Query: 175 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLL 624 ++++P NGDPF+G L TPI+ S L+ ++ NLPAYR +SP+LRG+EVG+AHG+ L+GP+VK GPLR++++ +++ + CL YG+ SF +G S+ D L+T++GW++ + A+FLL Sbjct: 4 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSSS-------------DPLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 140
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_GRATL (Photosystem I reaction center subunit XI OS=Gracilaria tenuistipitata var. liui GN=psaL PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.723e-27 Identity = 62/154 (40.26%), Postives = 89/154 (57.79%), Query Frame = 1 Query: 181 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNLP 642 IQ N DPF+G+L TP+++S L+NLPAYR +SPLLRG+E+G+AHG+ LVGPF K GPLRNT++ ++IL++CL++YG SF++ + D LQT +GW + + G +AY LL N+P Sbjct: 5 IQSYNNDPFLGNLSTPVSTSTFTKGLLNNLPAYRRGLSPLLRGLEIGMAHGYFLVGPFDKLGPLRNTDVALLSGFLSAVGLIIILTVCLSMYGNVSFDKDDAK--------------DLLQTTEGWGQFTAGFLVGAVGGSGFAYLLL--ANIP 142
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_PORPU (Photosystem I reaction center subunit XI OS=Porphyra purpurea GN=psaL PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.057e-27 Identity = 62/156 (39.74%), Postives = 87/156 (55.77%), Query Frame = 1 Query: 175 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNLP 642 + I+P N DPF+G+L TP+++S L NLPAYR +SPLLRG+E+G+AHG+ L+GPF K GPLR T++ ++IL+ CL++YG SF R D LQTA+GW + + G +AY LL N+P Sbjct: 3 EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPFDKLGPLRGTDVALLAGFLSSVGLIIILTTCLSMYGNVSFT--------------RSDSKDPLQTAEGWGQFTAGFLVGAVGGSGFAYLLL--ANIP 142
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_SYNEN (Photosystem I reaction center subunit XI OS=Synechococcus elongatus naegeli GN=psaL PE=3 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.795e-26 Identity = 55/150 (36.67%), Postives = 89/150 (59.33%), Query Frame = 1 Query: 175 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLL 624 ++++P NGDPF+G L TPI+ S L+ ++ NLPAYR +SP+L G+EVG+AHG+ L+GP+VK GPLR++++ +++ + CL YG+ SF +G S+ D L+T++GW++ + A+FLL Sbjct: 4 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILPGLEVGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSSS-------------DPLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 140 The following BLAST results are available for this feature:
BLAST of CX296317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296317 ID=CX296317; Name=CX296317; organism=Citrus clementina; type=EST; length=684bpback to top |