CX296508

Overview
NameCX296508
Unique NameCX296508
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296508 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 3.876e-95
Identity = 168/221 (76.02%), Postives = 181/221 (81.90%), Query Frame = 1
Query:    4 QFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVMTGDNDCPIADVAITDCGEIPEGADDGISNFFNDGDSYPDWPADLDQTPDELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACXXXXXXXXXXXXXTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELA 666
            QFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHV   +  CP  DV I DCGEIPEGADDGI +FF DGD YPDWP DL+++P ELSWWM  VD +K  GNEH+KKQDYKMALRKYRKALRYLDICWEKEGIDE  S++LRKTKSQIFTNS+AC             TEFAMRD D+NVKALFRQGQAYMALN+VDAA ES EKAL+ EPND GIKKE A
Sbjct:  119 QFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEIPEGADDGICDFFKDGDVYPDWPIDLNESPAELSWWMETVDFVKAHGNEHFKKQDYKMALRKYRKALRYLDICWEKEGIDEETSTALRKTKSQIFTNSAACKLKFGDAKGALLDTEFAMRDEDNNVKALFRQGQAYMALNNVDAAAESLEKALQFEPNDAGIKKEYA 339          
BLAST of CX296508 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.451e-35
Identity = 94/231 (40.69%), Postives = 121/231 (52.38%), Query Frame = 1
Query:    4 QFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVMTGDNDCPIADVAITDCGEIPEGADDGISNFFNDGDSYPDWPADLDQTPDELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLR----KTKSQIFTNSSACXXXXXXXXXXXXXTEFAMR------DGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELA 666
            QFFITT  T HLDGKHVVFG+V KG  VVR++E++ T  +D P+ D  I  CGE+ EG DDGI     DGD Y ++P D  + P E +  +     +K  GN ++KK D+  A +KY KA+RYL+   EK   DE     L       K   + N S C             T   +          D  KA FR+G A M   D + A+E FEKA + +P D GIKKELA
Sbjct:  118 QFFITTVPTPHLDGKHVVFGKVLKGKAVVRALENLET-VSDRPVEDAVIAKCGELAEGEDDGI-RASEDGDVYEEYPDD-HEGPKEPNDVLQIATHLKDIGNTYFKKGDHANAAKKYLKAIRYLN---EKPAFDENDPKELEGKFAAIKIPCYLNRSMCALKLGEYSECVKVTTTVLEYDSKYLKPTDITKAYFRRGSAKMNTRDFEGAIEDFEKAHEKDPEDAGIKKELA 342          
BLAST of CX296508 vs. ExPASy Swiss-Prot
Match: PPID_MOUSE (40 kDa peptidyl-prolyl cis-trans isomerase OS=Mus musculus GN=Ppid PE=1 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 1.603e-32
Identity = 81/220 (36.82%), Postives = 117/220 (53.18%), Query Frame = 1
Query:    4 QFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVMTGDNDCPIADVAITDCGEIPEGADDGISNFFNDGDSYPDWPADLDQTPDELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACXXXXXXXXXXXXXTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKEL 663
            QFFITT  T HLDGKHVVFG+V KG+GV R++E+V   + + P     I +CGE+ EG D GI      GDS+PD+P D D    ++   +   + +K  GN  +K Q+++MA++KY K LRY+D    K  I++   S L+        N  AC                A+     N KAL+R+ Q +  L + D A+   +KA ++ P D  I+ EL
Sbjct:  131 QFFITTVPTPHLDGKHVVFGQVIKGLGVARTLENVEV-NGEKPAKLCVIAECGELKEGDDWGIFPKDGSGDSHPDFPEDADIDLKDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYAKVLRYVDS--SKAVIEKADRSRLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALEMDPSNTKALYRKAQGWQGLKEYDQALADLKKAQEIAPGDKAIQAEL 347          
BLAST of CX296508 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 4.665e-32
Identity = 81/220 (36.82%), Postives = 116/220 (52.73%), Query Frame = 1
Query:    4 QFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVMTGDNDCPIADVAITDCGEIPEGADDGISNFFNDGDSYPDWPADLDQTPDELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACXXXXXXXXXXXXXTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKEL 663
            QFFITT  T HLDGKHVVFG+V KG+GV R +E+V   + + P     I +CGE+ EG + GI      GDS+PD+P D D    ++   +   + +K  GN  +K Q+++MA++KY K LRYLD    K  I++   S L+        N  AC                A+     N KAL+R+ Q +  L + D A+   +KA ++ P D  I+ EL
Sbjct:  131 QFFITTVPTPHLDGKHVVFGQVIKGLGVARMLENVEV-NGEKPAKLCVIAECGELKEGDEWGIFPKDGSGDSHPDFPEDADIDLKDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYAKVLRYLDS--SKAVIEKADVSRLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALEMDPSNTKALYRKAQGWQGLKEYDQALADLKKAQEIAPGDKAIQAEL 347          
BLAST of CX296508 vs. ExPASy Swiss-Prot
Match: PPID_BOVIN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Bos taurus GN=PPID PE=1 SV=6)

HSP 1 Score: 134.806 bits (338), Expect = 3.949e-31
Identity = 77/220 (35.00%), Postives = 114/220 (51.82%), Query Frame = 1
Query:    4 QFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVMTGDNDCPIADVAITDCGEIPEGADDGISNFFNDGDSYPDWPADLDQTPDELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACXXXXXXXXXXXXXTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKEL 663
            QFFITT  T HLDGKHVVFG+V KGMGV + +E+V     + P     I +CGE+ EG D GI      GDS+PD+P D D    ++   +   + +K  GN  +K Q+++MA++KY K LRY++    +   ++   + L+        N  AC                A+     N KAL+R+ Q +  L + D A+   +KA ++ P D  I+ EL
Sbjct:  131 QFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEV-KGEKPAKLCVIAECGELKEGDDWGIFPKDGSGDSHPDFPEDADVDLKDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVE--GSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAEL 347          
BLAST of CX296508 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 5.157e-31
Identity = 79/220 (35.91%), Postives = 113/220 (51.36%), Query Frame = 1
Query:    4 QFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVMTGDNDCPIADVAITDCGEIPEGADDGISNFFNDGDSYPDWPADLDQTPDELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACXXXXXXXXXXXXXTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKEL 663
            QFFITT  T HLDGKHVVFG+V KG+GV R +E+V     + P     I +CGE+ EG D GI      GDS+PD+P D D    ++   +   + +K  GN  +K Q+++MA++KY + LRY+D    K  I+    + L+        N  AC                A+     N KAL+R+ Q +  L + D A+   +KA  + P D  I+ EL
Sbjct:  131 QFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEV-KGEKPAKLCVIAECGELKEGDDGGIFPKDGSGDSHPDFPEDADIDLKDVDKILLITEDLKNIGNTFFKSQNWEMAIKKYAEVLRYVDS--SKAVIETADRAKLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALELDPSNTKALYRRAQGWQGLKEYDQALADLKKAQGIAPEDKAIQAEL 347          
BLAST of CX296508 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.129e-28
Identity = 84/229 (36.68%), Postives = 110/229 (48.03%), Query Frame = 1
Query:    4 QFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVMTGDNDCPIADVAITDCGEIPEGADDGISNFFND--GDSYPDWPAD--LDQTPDELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACXXXXXXXXXXXXXTEFAMR----DGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELA 666
            QFF+TT  T HLDGKHVVFG V  G  VVR IE++ T   D P  D  I DCGE+   A         D  GD Y D+P D   D  P   S  +      K FGN+ +K  D  +AL KY+K LRYL+   E +         L   +  + +N++                + A+        D  KAL+R+G A + + D D+A+ S E+A KL P DG I  ELA
Sbjct:  126 QFFVTTVPTPHLDGKHVVFGEVLSGKSVVRQIENLKT-QGDKPTKDAVIADCGELSGDAAVSADTKTADAYGDEYEDFPEDEATDGQPLSASKILKIATDCKDFGNKAFKAGDLPVALDKYQKGLRYLNEDPELDNEPADTKQKLDALRVSLNSNAALMNMKLSAWDECIRSADGALAVATISDKDRAKALYRRGYAQVRIKDEDSALTSLEEAKKLAPEDGAIVNELA 353          
BLAST of CX296508 vs. ExPASy Swiss-Prot
Match: PPID_YARLI (Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia lipolytica GN=CPR6 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.189e-27
Identity = 76/226 (33.63%), Postives = 115/226 (50.88%), Query Frame = 1
Query:    4 QFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVMTGDNDCPIADVAITDCGEIPEGADDGISNFFN-DGDSYPDWPADLDQTP-DELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACXXXXXXXXXXXXXTEFAMRD----GDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKEL 663
            QFFITTT T HLD KHVVFG++  G G+VR IE   TG+ D P   V I DCGE+P      + N  +  GD Y D+  D D    ++ +  + A++ +K  G + +K+ + + AL+KY KA  YL+  +  + + E   + +   +   + N +                  A+ D      +  KALFR+G  Y AL +   A++    AL+LEP DG IK ++
Sbjct:  118 QFFITTTETPHLDNKHVVFGKLLSGKGIVRQIERTETGEQDRPKQPVTIVDCGELPADFQVPVGNVDDGTGDDYEDFLKDNDNVDVNDPASVLGAIEKLKSIGTKLFKEGNAEGALKKYLKATTYLE-DYLPDDLSEENIAKVHALRISCYLNVALMALKVNQPKVAIKAATSALDDETVANKEKAKALFRRGSGYAALKNETDALKDLNAALELEPADGAIKNKI 342          
BLAST of CX296508 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.189e-27
Identity = 81/226 (35.84%), Postives = 108/226 (47.79%), Query Frame = 1
Query:    4 QFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVMTGDNDCPIADVAITDCGEIPEGADDGISNFFND--GDSYPDWPADLDQTPDELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACXXXXXXXXXXXXXTEFAMRDGD----DNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKEL 663
            QFFITT  T HLDGKHVVFG V  G  VVR IE++ T   D P  +  I DCGE+   A         D  GD Y D+P D   T D ++  +    + K +GN  +K  +Y + L KY+K LRY++   E E   +     L   +  +  NS+                  A+  G     D  KA +R+G A + L D +AAV    +A KL PND  I +EL
Sbjct:  125 QFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSGDRPAKEALIVDCGELTGDAALAADVKQPDALGDPYEDFPEDCTDTLDAVA-VLKIAKASKDYGNTAFKSGNYSLGLDKYQKGLRYINEEPELEDQPQSIKDELEALRFSLNNNSALLNIKLEAWDDAARSASAALEVGGVKDADRAKAFYRRGLANIHLKDEEAAVRDLTEANKLAPNDSAITREL 349          
BLAST of CX296508 vs. ExPASy Swiss-Prot
Match: PPID_ASPFU (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus fumigatus GN=cpr6 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.315e-26
Identity = 83/234 (35.47%), Postives = 110/234 (47.01%), Query Frame = 1
Query:    4 QFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVMTGDNDCPIADVAITDCGEIPEGADDGISNFFND--GDSYPDWPADLDQTPDELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGID----EGKSSSLRKTKSQIFTNSSACXXXXXXXXXXXXXTEFAMRDGD-------DNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELA 666
            QFFITT  T HLDGKHVVFG V  G  +VR IE++ T   D P  DV I DCGE+     +  +    D  GD Y D+P D                 +K FGN  +K  D  + L KY+K LRYL+   + +  D    E +  SLR T   + +NSS                 +A+   D       D  KA +R+  AY    + D A++  ++ALKL P D GI  E+A
Sbjct:  126 QFFITTVPTPHLDGKHVVFGEVINGKSIVRKIENMPT-QADKPTTDVTIVDCGELSGEDYENATKQVADATGDPYEDYPDDHQGEELNAQVCFKIASELKNFGNTAFKSGDVALGLDKYQKGLRYLNEFPDPDENDPKDLEPQMKSLRFT---LHSNSSLLANKLGQYKNAQNWATYALEVADAANAKEADRAKAYYRRAVAYSGQKEEDEALKDLQEALKLAPGDAGILNEIA 355          
The following BLAST results are available for this feature:
BLAST of CX296508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
CYP40_ARATH3.876e-9576.02Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]
PPID_RHIOR3.451e-3540.69Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
PPID_MOUSE1.603e-3236.8240 kDa peptidyl-prolyl cis-trans isomerase OS=Mus ... [more]
PPID_RAT4.665e-3236.8240 kDa peptidyl-prolyl cis-trans isomerase OS=Ratt... [more]
PPID_BOVIN3.949e-3135.0040 kDa peptidyl-prolyl cis-trans isomerase OS=Bos ... [more]
PPID_HUMAN5.157e-3135.9140 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
PPID_NEUCR3.129e-2836.6841 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
PPID_YARLI1.189e-2733.63Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia ... [more]
PPID_GIBZE1.189e-2735.84Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
PPID_ASPFU1.315e-2635.47Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]

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Properties
Property NameValue
Genbank descriptionC05142A10SK FerrChloL1 Citrus clementina cDNA clone C05142A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296508 ID=CX296508; Name=CX296508; organism=Citrus clementina; type=EST; length=671bp
GGTCAATTCTTCATCACCACAACTCGTACATCTCACCTAGATGGGAAACA
TGTTGTGTTTGGGAGGGTAACTAAGGGAATGGGAGTTGTTCGTTCAATAG
AACATGTCATGACTGGTGACAATGATTGCCCCATTGCTGATGTTGCCATC
ACAGATTGCGGAGAGATTCCTGAGGGGGCTGATGATGGGATATCTAATTT
TTTCAACGATGGTGATTCATATCCTGATTGGCCAGCTGACCTTGATCAGA
CACCTGATGAACTTTCTTGGTGGATGAATGCTGTTGATTCTATTAAGGTT
TTTGGAAACGAACATTACAAGAAACAAGACTATAAGATGGCACTTAGGAA
GTACCGGAAGGCCTTACGCTATCTGGATATCTGCTGGGAAAAAGAAGGGA
TTGATGAAGGGAAGAGTTCATCTTTAAGAAAGACAAAGTCACAGATCTTC
ACAAATAGTTCTGCTTGTAAACTGAAATTGGGTGATCTGAAAGGCGCATT
GTTGGATACTGAGTTTGCAATGCGTGATGGAGATGACAATGTGAAAGCTT
TGTTTCGCCAAGGTCAGGCATACATGGCCCTTAATGATGTTGATGCTGCA
GTTGAAAGCTTTGAGAAGGCACTAAAATTGGAGCCAAATGATGGTGGTAT
AAAGAAGGAACTTGCTGTTGC
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