CX296554
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296554 vs. ExPASy Swiss-Prot
Match: ATPD_SPIOL (ATP synthase delta chain, chloroplastic OS=Spinacia oleracea GN=ATPD PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16 Identity = 44/136 (32.35%), Postives = 77/136 (56.62%), Query Frame = 1 Query: 286 ASGYAAALLDKALCHSSLEAVQRDVLKLSRLLKNEQIQAVCADPFVGDKDKGQIVKELLSSWKVNRYLAALLRMLIERNKVAMVSDVLEEFQRIYDDLIGTRVVFVSSAKKMEEDQLFHIAKKSSNLCGAAQVKIR 693 AS YA+AL D A +LEA DV KL R+ E + A+P + +K ++ E++++ + + A + +LI+ ++ +V ++L EF+ +++ + GT V V+S K+E D L IAK + GA V+I+ Sbjct: 75 ASRYASALADVADVTGTLEATNSDVEKLIRIFSEEPVYYFFANPVISIDNKRSVLDEIITTSGLQPHTANFINILIDSERINLVKEILNEFEDVFNKITGTEVAVVTSVVKLENDHLAQIAKGVQKITGAKNVRIK 210
BLAST of CX296554 vs. ExPASy Swiss-Prot
Match: ATPD_TOBAC (ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum GN=ATPD PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15 Identity = 41/136 (30.15%), Postives = 78/136 (57.35%), Query Frame = 1 Query: 286 ASGYAAALLDKALCHSSLEAVQRDVLKLSRLLKNEQIQAVCADPFVGDKDKGQIVKELLSSWKVNRYLAALLRMLIERNKVAMVSDVLEEFQRIYDDLIGTRVVFVSSAKKMEEDQLFHIAKKSSNLCGAAQVKIR 693 A YA AL D A + +LE D+ K+ ++ +E + P VG++ K ++V E++SS + ++A L +L++ +V ++ ++++EF+++Y+ L T + V+S K+E L IAK L G+ V+I+ Sbjct: 66 AGSYANALADIAKSNGTLEQTTADLEKIEKISDDEAVFNFFVSPIVGEEKKRELVDEIVSSSSIQPHVANFLNILVDMKRVELIKEIVKEFEKVYNTLTDTELAVVTSVVKLESQHLAQIAKGVQRLTGSKNVRIK 201
BLAST of CX296554 vs. ExPASy Swiss-Prot
Match: ATPD_PEA (ATP synthase delta chain, chloroplastic OS=Pisum sativum GN=ATPD PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14 Identity = 42/136 (30.88%), Postives = 76/136 (55.88%), Query Frame = 1 Query: 286 ASGYAAALLDKALCHSSLEAVQRDVLKLSRLLKNEQIQAVCADPFVGDKDKGQIVKELLSSWKVNRYLAALLRMLIERNKVAMVSDVLEEFQRIYDDLIGTRVVFVSSAKKMEEDQLFHIAKKSSNLCGAAQVKIR 693 A YAAAL D A +++L+A+ D K+ +L + ++ + P V D K Q++ E ++ + L +LI+ ++ M+ D+++EF+ +Y+ L T +V V+S K+E L IAK+ L GA +V+ + Sbjct: 69 AGSYAAALADLANSNNTLDAITADFDKIEQLFSDPKVFDYFSSPIVEDSTKRQLIGEFATTSGFQPHTHNFLNVLIDSKRIDMIIDIIKEFEFVYNTLTDTELVVVTSVVKLESHHLAQIAKQVQKLTGAKKVRTK 204
BLAST of CX296554 vs. ExPASy Swiss-Prot
Match: ATPD_CHLRE (ATP synthase delta chain, chloroplastic OS=Chlamydomonas reinhardtii GN=ATPD PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12 Identity = 41/137 (29.93%), Postives = 78/137 (56.93%), Query Frame = 1 Query: 286 ASGYAAALLDKALCHSSLEAVQRDVLKLSRLLK-NEQIQAVCADPFVGDKDKGQIVKELLSSWKVNRYLAALLRMLIERNKVAMVSDVLEEFQRIYDDLIGTRVVFVSSAKKMEEDQLFHIAKKSSNLCGAAQVKIR 693 + YA AL++ A LEAV DV ++ L+K N ++ A+ +P V K ++ ++ +Y L +L+E++++++V ++ E F+ +Y + T+V + SA K+E++Q F IAKK L G+ +K++ Sbjct: 39 SESYAKALVELADEKGKLEAVHADVDAVAGLMKENAKLSALIMNPVVESDKKRAVLAKIAKEAGFQQYTINWLNLLVEKDRLSLVPEICECFEDLYCQMTDTQVATLRSAVKLEQEQQFLIAKKLQELTGSKNIKLK 175 The following BLAST results are available for this feature:
BLAST of CX296554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296554 ID=CX296554; Name=CX296554; organism=Citrus clementina; type=EST; length=699bpback to top |