CX296581

Overview
NameCX296581
Unique NameCX296581
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig695 contig Ccv1_Contig695:1..688. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: CBP23_HORVU (Serine carboxypeptidase II-3 OS=Hordeum vulgare GN=CXP;2-3 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 8.882e-66
Identity = 131/239 (54.81%), Postives = 160/239 (66.95%), Query Frame = 1
Query:    4 AGVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDF---ATGQLSTS-CDQYQTQGVREYGQIDLYNVYAPLCKS-SAPPPPTAGVIREYDPCSDKYVNSYLNLAEVQAALHAKHTN----WTTCGDL--RWTDSPSTVLPTIQQLIASGIRVWIY 687
            AGVG+SYSNT++DY   GDN TAED+Y FL NW ERFP+YK R+F+ITGESYAGHYVPQLA+ IL    +   INLKGI IGNA I+D   +KGM+DFFWTHAL SDET   I+K C+F     G  S + CD    +       ID+YN+YAP C+S     PP A  I  +DPC+D YV +YLN  +VQ ALHA  T     W+ C D+  RW DS  TVLP IQ+L+ + IRVW+Y
Sbjct:  186 AGVGYSYSNTTADYGRSGDNGTAEDAYQFLDNWLERFPEYKGREFYITGESYAGHYVPQLAHAIL--RHASPDINLKGIMIGNAVINDWTDSKGMYDFFWTHALISDETADGISKNCNFTAYGAGVASNALCDAASDEVGESLADIDIYNIYAPNCQSEKLVTPPIAPSIDNFDPCTDYYVEAYLNRPDVQKALHANVTRLDHPWSACSDVLTRWVDSAKTVLPIIQELMKNSIRVWVY 422          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: SCP40_ARATH (Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 1.016e-61
Identity = 122/239 (51.05%), Postives = 155/239 (64.85%), Query Frame = 1
Query:    4 AGVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFATGQLST---SCDQYQTQGVREYGQIDLYNVYAPLCKSS--APPPPTAGVIREYDPCSDKYVNSYLNLAEVQAALHAKHT----NWTTCGDL--RWTDSPSTVLPTIQQLIASGIRVWIY 687
            AGVGFSY+NT+SD    GD NTA D+Y FLVNW ERFP+YK RD +I GESYAGHYVPQLA+TIL  +  ++  NLKGI IGNA I+D     GM+DFF +HAL S+++ A +   CD  T   S     C     Q   +   +D+YN+YAPLC +S     P     IRE+DPCSD YV +YLN  EVQAALHA  T     W  C  +  +W DSP+TV+P I++L+  G+RVW++
Sbjct:  179 AGVGFSYTNTTSDLEKHGDRNTAADNYIFLVNWLERFPEYKGRDLYIAGESYAGHYVPQLAHTILLHH--RSFFNLKGILIGNAVINDETDLMGMYDFFESHALISEDSLARLKSNCDLKTESASVMTEECAVVSDQIDMDTYYLDIYNIYAPLCLNSTLTRRPKRGTTIREFDPCSDHYVQAYLNRPEVQAALHANATKLPYEWQPCSSVIKKWNDSPTTVIPLIKELMGQGVRVWVF 415          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 7.536e-57
Identity = 113/264 (42.80%), Postives = 154/264 (58.33%), Query Frame = 1
Query:    7 GVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN---TSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFATGQLSTSCDQYQTQGVREYGQIDLYNVYAPLC-------------KSSAPPPPTAGVIRE---------------YDPCSDKYVNSYLNLAEVQAALHAKHTN----WTTCGDL--RWTDSPSTVLPTIQQLIASGIRVWIY 687
            GVGFSY+NTS D   LGD  TA DSY FLVNWF+RFPQYK+ DF+I GESYAGHYVPQL+  I  +N   + K  INLKG+ IGNA +DD    KGM ++ W HA+ SD     +NK CDF    ++  C+    +    Y  +D+Y++YAP C               + P P    ++R                YDPC+ +Y   Y+N  +VQ ALHA  TN    WT C D    W+D+P+++LPT++ L+++G+RVW++
Sbjct:  151 GVGFSYTNTSRDIKQLGDTVTARDSYNFLVNWFKRFPQYKSHDFYIAGESYAGHYVPQLSELIYKENKIASKKDFINLKGLMIGNALLDDETDQKGMIEYAWDHAVISDALYEKVNKNCDFKQKLVTKECNDALDEYFDVYKILDMYSLYAPKCVPTSTNSSTSHSVAGNRPLPAFRSILRPRLISHNEGWRRMAAGYDPCASEYTEKYMNRKDVQEALHANVTNISYPWTHCSDTVSFWSDAPASMLPTLRTLVSAGLRVWVF 414          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.740e-56
Identity = 111/251 (44.22%), Postives = 150/251 (59.76%), Query Frame = 1
Query:    4 AGVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTI--LSKNTSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFATGQLSTSCDQYQTQGV-REYGQIDLYNVYAPLCKSSAPPPPTAG-------------VIREYDPCSDKYVNSYLNLAEVQAALHAKHT----NWTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIY 687
            AGVG+SY+NTSSD  + GD  TA+D+  FL+ W  RFPQYK RDF+I GESYAGHYVPQLA  I   +K  SK IINLKG  +GNA  D+   + G   ++WTHA+ SD++  +I KYC+F   ++S  CD      +  E+G ID Y++Y P C ++     T G             ++  YDPC++ Y   Y N  +VQ A+HA  T     WT C D+    W DS  T+LP  ++L ASG+R+WI+
Sbjct:  131 AGVGYSYTNTSSDLKDSGDERTAQDNLIFLIKWLSRFPQYKYRDFYIAGESYAGHYVPQLAKKINDYNKAFSKPIINLKGFLVGNAVTDNQYDSIGTVTYWWTHAIISDKSYKSILKYCNFTVERVSDDCDNAVNYAMNHEFGDIDQYSIYTPTCVAAQQKKNTTGFFVRMKNTLLRRRLVSGYDPCTESYAEKYFNRPDVQRAMHANVTGIRYKWTACSDVLIKTWKDSDKTMLPIYKELAASGLRIWIF 381          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: SCP26_ARATH (Serine carboxypeptidase-like 26 OS=Arabidopsis thaliana GN=SCPL26 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.971e-54
Identity = 109/243 (44.86%), Postives = 145/243 (59.67%), Query Frame = 1
Query:    4 AGVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFATGQ-LSTSCDQYQTQGVREYGQIDLYNVYAPLCKSSAPPPPT-------AGVIREYDPCSDKYVNSYLNLAEVQAALHAKHTN----WTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIY 687
            AGVGFSYSNT+SD    GD  TAED+Y FLV WFERFPQYK+R+F+I GESYAGHYVPQL+  +  K      IN KG  +GNA IDD     G+F+++W H L SD T   +   C+F + +  S+ C +       E G ID Y++Y   CK  A    +         + R YDPC++KY   Y N  EVQ A+HA  T     W  C D+   +W DSP ++LP  ++LIA+G+R+W++
Sbjct:  130 AGVGFSYSNTTSDLYTAGDQRTAEDAYVFLVKWFERFPQYKHREFYIAGESYAGHYVPQLSQIVYEKR--NPAINFKGFIVGNAVIDDYHDYVGLFEYWWAHGLISDLTYHNLRITCEFGSSEHPSSKCTKAMEAADLEQGNIDPYSIYTVTCKKEAAALRSRFSRVRHPWMWRAYDPCTEKYSGMYFNSPEVQKAMHANITGLAYPWKGCSDIVGEKWADSPLSMLPIYKELIAAGLRIWVF 370          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 7.799e-54
Identity = 111/256 (43.36%), Postives = 148/256 (57.81%), Query Frame = 1
Query:    4 AGVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN-TSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFATGQLSTSCDQ-YQTQGVREYGQIDLYNVYAPLCKSSAP-------------------PPPTAGVIREYDPCSDKYVNSYLNLAEVQAALHAKHT----NWTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIY 687
            AGVGFSY+N SSD  N GD  TA+DS  FL+ W  RFP+Y +R+ +ITGESYAGHYVPQLA  I++ N  SK  +NLKGI +GNA  D++    G   ++W+HA+ SD T   +   CDF+  + S  C+  Y     +E+G ID YN+YAP C  S+                    P      I  YDPC+++Y   Y N  +VQ ALHA  T     WT C ++    W D+ STVLP  +++IA GIRVW++
Sbjct:  135 AGVGFSYTNRSSDLFNTGDRRTAKDSLQFLIQWLHRFPRYNHREIYITGESYAGHYVPQLAKEIMNYNKRSKNPLNLKGIMVGNAVTDNHYDNLGTVSYWWSHAMISDRTYHQLISTCDFSRQKESDECETLYSYAMEQEFGNIDQYNIYAPPCNKSSDGGGSYNGSSGRRSMRLPHLPHSVLRKISGYDPCTERYAEIYYNRPDVQKALHANTTKIPYKWTACSEVLNRNWNDTDSTVLPIYREMIAGGIRVWVF 390          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.871e-53
Identity = 105/254 (41.34%), Postives = 142/254 (55.91%), Query Frame = 1
Query:    7 GVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTS--KTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFATGQLSTSCDQYQTQGVREYGQIDLYNVYAPLCKSSAPPPPTAGVIR----------------EYDPCSDKYVNSYLNLAEVQAALHAKHT----NWTTCGD-----LRWTDSPSTVLPTIQQLIASGIRVWIY 687
            GVGFSY+NTSSD+   GD  TA+++  FL++W  RFPQY+ RDF+I GESYAGHYVPQLA  I   N +    +INLKG  +GN  +D N    G   ++W+HA+ SD +   I K CDF   + S  CD        ++G ID Y++Y P C    PP       +                +YDPC++ Y   Y N  EVQ A+HA HT     WT C D       W DS +++LP  ++LIA+G+R+W+Y
Sbjct:  130 GVGFSYTNTSSDFEESGDERTAQENLIFLISWMSRFPQYRYRDFYIVGESYAGHYVPQLAQKIHEYNNAYKNPVINLKGFMVGNPEMDKNNDRLGTITYWWSHAMISDASYNRILKNCDFTADRFSKECDSAIYVAAADFGDIDQYSIYTPKC---VPPQDQTNQTKFEQMMQMHTTKRFLEDQYDPCTENYAEIYYNRPEVQRAMHANHTAIPYKWTACSDSVFNNWNWRDSDNSMLPIYKELIAAGLRIWVY 380          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.602e-53
Identity = 107/245 (43.67%), Postives = 146/245 (59.59%), Query Frame = 1
Query:    7 GVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKN--TSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYCDFATG-QLSTSCDQYQTQGVREYGQIDLYNVYAPLCKSSAPP--------PPTAGVIREYDPCSDKYVNSYLNLAEVQAALHA----KHTNWTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIY 687
            GVG+SYSNTSSD  + GD  TAEDS  FL+ W ERFP+YK RDF+I GESYAGHY+PQL+  I+  N  + K  INLKG  +GN  +DD     G+F + W+    SD+T + +   C F +    S  C++      +E G ID Y+V+ P C ++A          P T+ V  +YDPC++K+   Y NL EVQ ALH       + W TC D+    W DSPS+VL    +LIA+G+R+W++
Sbjct:  137 GVGYSYSNTSSDLKSNGDKRTAEDSLKFLLKWVERFPEYKGRDFYIVGESYAGHYIPQLSEAIVKHNQGSDKNSINLKGYMVGNGLMDDFHDRLGLFQYIWSLGFISDQTYSLLQLQCGFESFIHSSKQCNKILEIADKEIGNIDQYSVFTPACVANASQSNMLLKKRPMTSRVSEQYDPCTEKHTTVYFNLPEVQKALHVPPGLAPSKWDTCSDVVSEHWNDSPSSVLNIYHELIAAGLRIWVF 381          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 1.921e-52
Identity = 105/251 (41.83%), Postives = 145/251 (57.77%), Query Frame = 1
Query:    4 AGVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYC-DFATGQLSTSCDQYQTQGVREYGQIDLYNVYAPLCKSSAPPPPTAGVIRE--------------YDPCSDKYVNSYLNLAEVQAALHAKHT-----NWTTCGD---LRWTDSPSTVLPTIQQLIASGIRVWIY 687
            AGVGFSY+NTSSD    GDN TA DSY FL  WFERFP YK RDF+I GESYAGHYVP+L+   L   +   +INLKG  +GN  IDD     G F+F+W H + SD+T   + + C   +    S +CD        E G ID+Y++Y P+C  ++    ++  + +              YDPC+++Y  +Y N  +VQ ALHA  T      W TC D     W D+P ++LP  ++LIA+G+R+W++
Sbjct:  108 AGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQ--LVHRSKNPVINLKGFMVGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKEACLHDSFIHPSPACDAATDVATAEQGNIDMYSLYTPVCNITSSSSSSSSSLSQQRRSRGRYPWLTGSYDPCTERYSTAYYNRRDVQMALHANVTGAMNYTWATCSDTINTHWHDAPRSMLPIYRELIAAGLRIWVF 356          
BLAST of CX296581 vs. ExPASy Swiss-Prot
Match: CBP2_HORVU (Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.245e-51
Identity = 104/248 (41.94%), Postives = 143/248 (57.66%), Query Frame = 1
Query:    4 AGVGFSYSNTSSDYSNLGDNNTAEDSYTFLVNWFERFPQYKNRDFFITGESYAGHYVPQLAYTILSKNTSKTIINLKGIAIGNAWIDDNLCTKGMFDFFWTHALNSDETNAAINKYC-DFATGQLSTSCDQYQTQGVREYGQIDLYNVYAPLCKSSAPPPPTA-----------GVIREYDPCSDKYVNSYLNLAEVQAALHAKHT-----NWTTCGD---LRWTDSPSTVLPTIQQLIASGIRVWIY 687
            AGVGFSY+NTSSD    GDN TA DSY FL  WFERFP YK R+F++ GESYAGHYVP+L+   L   +   +INLKG  +GN  IDD     G F+F+W H + SD+T   +   C   +    S +CD        E G ID+Y++Y P+C  S+    ++            +   YDPC+++Y  +Y N  +VQ ALHA  T      WT C D     W D+P ++LP  ++LIA+G+R+W++
Sbjct:  140 AGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAAWFERFPHYKYREFYVAGESYAGHYVPELSQ--LVHRSGNPVINLKGFMVGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKDACLHDSFIHPSPACDAATDVATAEQGNIDMYSLYTPVCNISSSSSSSSLSRRRTRGRYPWLTGSYDPCTERYSTAYYNRRDVQTALHANVTGAMNYTWTNCSDTINTHWHDAPRSMLPIYRELIAAGLRIWVF 385          
The following BLAST results are available for this feature:
BLAST of CX296581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
CBP23_HORVU8.882e-6654.81Serine carboxypeptidase II-3 OS=Hordeum vulgare GN... [more]
SCP40_ARATH1.016e-6151.05Serine carboxypeptidase-like 40 OS=Arabidopsis tha... [more]
SCP34_ARATH7.536e-5742.80Serine carboxypeptidase-like 34 OS=Arabidopsis tha... [more]
SCP24_ARATH3.740e-5644.22Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]
SCP26_ARATH5.971e-5444.86Serine carboxypeptidase-like 26 OS=Arabidopsis tha... [more]
SCP25_ARATH7.799e-5443.36Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
SCP22_ARATH3.871e-5341.34Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]
SCP29_ARATH6.602e-5343.67Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
CBP2_WHEAT1.921e-5241.83Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]
CBP2_HORVU1.245e-5141.94Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CB... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05146D03SK FerrChloL1 Citrus clementina cDNA clone C05146D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296581 ID=CX296581; Name=CX296581; organism=Citrus clementina; type=EST; length=688bp
GAGGCAGGAGTCGGGTTCTCATATTCAAATACCTCTTCGGACTACAGCAA
TCTCGGCGACAATAACACAGCTGAGGATTCTTATACTTTCCTCGTGAATT
GGTTCGAGAGATTTCCCCAATACAAAAACCGTGACTTCTTTATTACTGGT
GAGAGCTATGCTGGCCACTATGTCCCTCAACTTGCTTACACCATTCTCTC
CAAGAACACAAGTAAAACAATCATCAACCTCAAAGGCATAGCTATTGGGA
ATGCTTGGATAGATGATAATTTGTGCACCAAAGGAATGTTTGACTTTTTC
TGGACGCATGCTCTCAATTCCGATGAAACCAATGCCGCGATTAACAAATA
TTGTGACTTTGCGACCGGTCAACTTTCAACTTCGTGTGATCAATATCAAA
CTCAAGGAGTTAGGGAGTATGGACAGATTGATCTATACAACGTTTACGCT
CCACTTTGCAAATCATCAGCACCACCACCTCCAACAGCCGGCGTTATCAG
AGAATATGACCCCTGCTCCGACAAGTACGTTAATTCCTATTTAAACCTTG
CCGAGGTGCAAGCAGCTCTTCATGCGAAACATACCAACTGGACAACTTGC
GGCGACTTGAGATGGACCGACAGCCCATCAACTGTGCTTCCAACAATACA
GCAGCTGATAGCAAGTGGAATTAGGGTGTGGATATACA
back to top