CX296590

Overview
NameCX296590
Unique NameCX296590
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length388
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX296590 vs. ExPASy Swiss-Prot
Match: ACOX4_ARATH (Acyl-coenzyme A oxidase 4, peroxisomal OS=Arabidopsis thaliana GN=ACX4 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 8.501e-47
Identity = 84/112 (75.00%), Postives = 97/112 (86.61%), Query Frame = 3 
Query:   51 DKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAE 386
            +K  +SSYF+LP +++SVAFPQATPAS FPPC SDYY F+DLLT EEQA+R KVRECMEKE+APIM EYWEKAEFPFH+ PKLGA+ VAGG+IKGYGCPG S+T  AIA AE
Sbjct:   13 EKKVKSSYFDLPPMEMSVAFPQATPASTFPPCTSDYYHFNDLLTPEEQAIRKKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSIKGYGCPGLSITANAIATAE 124
The following BLAST results are available for this feature:
BLAST of CX296590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ACOX4_ARATH8.501e-4775.00Acyl-coenzyme A oxidase 4, peroxisomal OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionC05146E02SK FerrChloL1 Citrus clementina cDNA clone C05146E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296590 ID=CX296590; Name=CX296590; organism=Citrus clementina; type=EST; length=388bp
GATTCGGCCGAGGCCATGACTATTCACTCATCCAACATCAAGATGATGTT
GACAAAAATGCCAGGAGTTCGTATTTTAATTTACCAGCATTGGATATTTC
AGTCGCATTCCCTCAAGCAACACCGGCGTCTAAGTTTCCTCCTTGTGCGT
CAGACTACTATCAATTTGATGATCTCTTGACTTCGGAGGAGCAGGCTGTT
CGGATGAAAGTGAGAGAGTGTATGGAGAAAGAAATAGCCCCTATAATGGT
GGAGTATTGGGAGAAAGCAGAATTTCCCTTTCATGTTATTCCAAAGCTTG
GTGCCCTACGCGTAGCTGGTGGCACAATAAAGGGTTATGGCTGTCCTGGT
CACTCTGTTACTGGAGCTGCTATTGCTATAGCAGAAAT
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