CX296690
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIA_SPIOL (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Spinacia oleracea GN=petC PE=1 SV=2) HSP 1 Score: 216.468 bits (550), Expect = 1.434e-59 Identity = 95/108 (87.96%), Postives = 105/108 (97.22%), Query Frame = -1 Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 657 TH PGDRTLT+GLKGDPTYLVVE DKTLA++GINAVCTHLGCVVP+N+AENKFICPCHGSQYNNQGRVVRGPAPLSLALAH ++++GKVVFVPWTETDFRTGEAPWW+ Sbjct: 122 THAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 229 HSP 2 Score: 33.113 bits (74), Expect = 1.434e-59 Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = -2 Query: 642 AKDAIGNDIIAADWLTRTALG 704 AKDA+GND+IAA+WL A G Sbjct: 106 AKDALGNDVIAAEWLKTHAPG 126
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIA_ARATH (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Arabidopsis thaliana GN=petC PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 4.511e-58 Identity = 96/109 (88.07%), Postives = 103/109 (94.50%), Query Frame = -1 Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWWA 657 THGPGDRTLT+GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN AENKF+CPCHGSQYN QGRVVRGPAPLSLALAHA+I E GKV+FVPW ETDFRTG+APWW+ Sbjct: 121 THGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAENKFLCPCHGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVLFVPWVETDFRTGDAPWWS 229 HSP 2 Score: 31.5722 bits (70), Expect = 4.511e-58 Identity = 11/15 (73.33%), Postives = 15/15 (100.00%), Query Frame = -2 Query: 660 AKDAIGNDIIAADWL 704 AKDA+GND++AA+WL Sbjct: 105 AKDALGNDVVAAEWL 119
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIB_TOBAC (Cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic OS=Nicotiana tabacum GN=petC2 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 4.512e-58 Identity = 96/108 (88.89%), Postives = 104/108 (96.30%), Query Frame = -1 Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 657 TH PG+RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVP+N+AENKFICPCHGSQYNNQGRVVRGPAPLSLALAHA+I++GKVVFVPW ETDFRTGEAPWWA Sbjct: 121 THPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEAPWWA 228 HSP 2 Score: 30.8018 bits (68), Expect = 4.512e-58 Identity = 11/15 (73.33%), Postives = 15/15 (100.00%), Query Frame = -2 Query: 660 AKDAIGNDIIAADWL 704 AKDA+GND+IA++WL Sbjct: 105 AKDALGNDVIASEWL 119
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIA_ORYSJ (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Oryza sativa subsp. japonica GN=petC PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.000e-57 Identity = 94/108 (87.04%), Postives = 103/108 (95.37%), Query Frame = -1 Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 657 THGP DRTLT+GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN+AENKFICPCHGSQYNNQGRVVRGPAPLSLAL HA++++GKV+FVPW ETDFRTG+ PWWA Sbjct: 118 THGPNDRTLTQGLKGDPTYLVVEADKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALVHADVDDGKVLFVPWVETDFRTGDNPWWA 225 HSP 2 Score: 27.335 bits (59), Expect = 1.000e-57 Identity = 9/15 (60.00%), Postives = 13/15 (86.67%), Query Frame = -2 Query: 660 AKDAIGNDIIAADWL 704 AKD +GND++A +WL Sbjct: 102 AKDKLGNDVLAEEWL 116
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIA_SOLTU (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Solanum tuberosum GN=petC PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 1.699e-57 Identity = 94/108 (87.04%), Postives = 103/108 (95.37%), Query Frame = -1 Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 657 TH PG RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVPWN+AENKFICPCHGSQYNNQG+VVRGPAPLSLALAHA+I++GKVVFVPW ETDFRTG++PWWA Sbjct: 123 THSPGTRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPWNTAENKFICPCHGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGDSPWWA 230 HSP 2 Score: 28.4906 bits (62), Expect = 1.699e-57 Identity = 11/22 (50.00%), Postives = 15/22 (68.18%), Query Frame = -2 Query: 639 AKDAIGNDIIAADWLTRTALGT 704 AKDA GND++ +WL + GT Sbjct: 107 AKDANGNDVVVTEWLKTHSPGT 128
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIA_TOBAC (Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic OS=Nicotiana tabacum GN=petC1 PE=2 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 2.216e-57 Identity = 95/108 (87.96%), Postives = 103/108 (95.37%), Query Frame = -1 Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 657 TH PG+RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVP+N+AENKFICPCHGSQYNNQGRVVRGPAPLSLALAHA+I++GKVVFVPW ETDFRTGE PWWA Sbjct: 121 THPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 228 HSP 2 Score: 30.8018 bits (68), Expect = 2.216e-57 Identity = 11/15 (73.33%), Postives = 15/15 (100.00%), Query Frame = -2 Query: 660 AKDAIGNDIIAADWL 704 AKDA+GND+IA++WL Sbjct: 105 AKDALGNDVIASEWL 119
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIA_WHEAT (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Triticum aestivum GN=petC PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.088e-56 Identity = 91/107 (85.05%), Postives = 101/107 (94.39%), Query Frame = -1 Query: 337 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 657 THGP DRTL +GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN+AENKF+CPCHGSQYNNQG+VVRGPAPLSLAL HA++++GKVVFVPW ETDFRTG+ PWW Sbjct: 115 THGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWNAAENKFLCPCHGSQYNNQGKVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGDNPWW 221 HSP 2 Score: 27.7202 bits (60), Expect = 1.088e-56 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = -2 Query: 660 AKDAIGNDIIAADWL 704 AKD +GNDI+ DWL Sbjct: 99 AKDKLGNDILVEDWL 113
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIA_FRIAG (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Fritillaria agrestis GN=petC PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 4.098e-56 Identity = 91/109 (83.49%), Postives = 101/109 (92.66%), Query Frame = -1 Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWWA 657 THGPGDRTL +GL+GDPTYLVVE D++LA+YGINAVCTHLGCVVPWN AENKF+CPCHGSQYNNQG+VVRGPAPLSLAL+H +I E GKVVFVPW ETDFRTGE PWW+ Sbjct: 122 THGPGDRTLAQGLRGDPTYLVVENDRSLATYGINAVCTHLGCVVPWNKAENKFLCPCHGSQYNNQGKVVRGPAPLSLALSHCDISEEGKVVFVPWVETDFRTGENPWWS 230 HSP 2 Score: 30.8018 bits (68), Expect = 4.098e-56 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = -2 Query: 660 AKDAIGNDIIAADWL 704 AKDA+GNDI+AA WL Sbjct: 106 AKDAVGNDIVAAAWL 120
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRIA_PEA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum sativum GN=petC PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 6.965e-56 Identity = 92/110 (83.64%), Postives = 103/110 (93.64%), Query Frame = -1 Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHAN--IENGKVVFVPWTETDFRTGEAPWWA 657 TH PGDRTLT+GLKGDPTYLVVEKD+TLA++ INAVCTHLGCVVP+N AENKFICPCHGSQYN+QGRVVRGPAPLSLALAH + +E+GKVVFVPW ETDFRTG+APWW+ Sbjct: 121 THAPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPFNQAENKFICPCHGSQYNDQGRVVRGPAPLSLALAHCDVGVEDGKVVFVPWVETDFRTGDAPWWS 230 HSP 2 Score: 31.5722 bits (70), Expect = 6.965e-56 Identity = 12/21 (57.14%), Postives = 16/21 (76.19%), Query Frame = -2 Query: 642 AKDAIGNDIIAADWLTRTALG 704 AKDA+GND++A +WL A G Sbjct: 105 AKDAVGNDVVATEWLKTHAPG 125
BLAST of CX296690 vs. ExPASy Swiss-Prot
Match: UCRI_MICAN (Cytochrome b6-f complex iron-sulfur subunit OS=Microcystis aeruginosa (strain NIES-843) GN=petC PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 7.490e-52 Identity = 86/109 (78.90%), Postives = 99/109 (90.83%), Query Frame = -1 Query: 334 THGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWWA 657 +H GDRTL +GLKGDPTYLVV++DKTLA+YGINAVCTHLGCVVPWN++E KF+CPCHGSQYN +G+VVRGPAPLSLALAHAN+ +N KVVF WTETDFRTGE PWW+ Sbjct: 71 SHNAGDRTLAQGLKGDPTYLVVQEDKTLANYGINAVCTHLGCVVPWNASEEKFMCPCHGSQYNAEGKVVRGPAPLSLALAHANVTDNDKVVFSTWTETDFRTGEEPWWS 179 HSP 2 Score: 28.4906 bits (62), Expect = 7.490e-52 Identity = 11/17 (64.71%), Postives = 15/17 (88.24%), Query Frame = -2 Query: 657 TAKDAIGNDIIAADWLT 707 TAKDA+GND+I + +LT Sbjct: 54 TAKDALGNDVIVSQFLT 70 The following BLAST results are available for this feature:
BLAST of CX296690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296690 ID=CX296690; Name=CX296690; organism=Citrus clementina; type=EST; length=708bpback to top |