CX296708
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296708 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.382e-34 Identity = 70/96 (72.92%), Postives = 76/96 (79.17%), Query Frame = -1 Query: 312 WQVIRTPGSVNQDPIFKQYSLPPKEVGYPGGIFNPVNFAPIDEPKEKDFPNGRLPRWAFLGFIV*PNVTGKGPFENFLQPIFDPGHNPMVQTLSGN 599 WQ I+ PGSVNQDPIFKQYSLP EVGYPGGIFNP+NFAP E KEK+ NGRL AFLGFI+ NVTGKGPF+N LQ I DP HN +VQTL GN Sbjct: 157 WQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN 252
BLAST of CX296708 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.995e-33 Identity = 67/94 (71.28%), Postives = 74/94 (78.72%), Query Frame = -1 Query: 318 WQVIRTPGSVNQDPIFKQYSLPPKEVGYPGGIFNPVNFAPIDEPKEKDFPNGRLPRWAFLGFIV*PNVTGKGPFENFLQPIFDPGHNPMVQTLS 599 WQ I+ PGSVNQDPIFKQYSLP EVGYPGGIFNP+NFAP E KEK+ NGRL AFLGF+V NVTGKGPFEN LQ + DP HN +VQT + Sbjct: 158 WQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTFN 251
BLAST of CX296708 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.211e-30 Identity = 63/95 (66.32%), Postives = 73/95 (76.84%), Query Frame = -1 Query: 315 WQVIRTPGSVNQDPIFKQYSLPPKEVGYPGGIFNPVNFAPIDEPKEKDFPNGRLPRWAFLGFIV*PNVTGKGPFENFLQPIFDPGHNPMVQTLSG 599 WQ I+ PGSVNQDPIFK YSLPP E GYPG +FNP+NFAP+ E KEK+ NGRL AFLGF+V NV GKGPFEN Q + DP HN ++QT+SG Sbjct: 137 WQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVFNPLNFAPL-ENKEKELANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWHNTIIQTISG 230 The following BLAST results are available for this feature:
BLAST of CX296708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296708 ID=CX296708; Name=CX296708; organism=Citrus clementina; type=EST; length=599bpback to top |