CX296875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296875 vs. ExPASy Swiss-Prot
Match: CAF1K_ARATH (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 PE=2 SV=1) HSP 1 Score: 355.14 bits (910), Expect = 2.255e-97 Identity = 172/221 (77.83%), Postives = 193/221 (87.33%), Query Frame = -2 Query: 52 RQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFC-QSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHDGPEKHAGVLYGLEVY 711 R+ P+ Y +LKSNVDAL+LIQVGLTLSD+ GNLPDLG N ++IWEFNFRDFD+ D HAPDSIELLR GIDFERNR+EGV+S RFAELMMSSGL+CNESVSWVTFHSAYDFGYLVKILTRR LP L EFL +LR FFG+ +YDVKHIMRFC Q LYGGLDRVAR+L+V+RAVGKCHQAGSDSLLTW AFQ++RD+YFV DG EKHAGVLYGLEV+ Sbjct: 58 RRGNPNYLYNLLKSNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRHGIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALREFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQAFQRMRDLYFVEDGAEKHAGVLYGLEVF 278
BLAST of CX296875 vs. ExPASy Swiss-Prot
Match: CAF1I_ARATH (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana GN=CAF1-9 PE=2 SV=1) HSP 1 Score: 351.673 bits (901), Expect = 2.493e-96 Identity = 169/221 (76.47%), Postives = 192/221 (86.88%), Query Frame = -2 Query: 52 RQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQ-SLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHDGPEKHAGVLYGLEVY 711 R P D Y +LK+NVDAL+LIQVGLTLSD +GNLPDLG + FIWEFNFRDFD+A DAHAPDSIELLR QGIDFERN ++GV+S RFAELMMSSGLVCNE VSWVTFHSAYDFGYL+KILTRR LP L EF ++RV FG +YDVKH+M+FC+ L+GGLDRVARTL+V+RAVGKCHQAGSDSLLTWHAFQ++RD+YFV DGPEKHAGVLYGLEV+ Sbjct: 60 RFTNPDDLYTLLKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAFQRMRDLYFVQDGPEKHAGVLYGLEVF 280
BLAST of CX296875 vs. ExPASy Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2) HSP 1 Score: 240.35 bits (612), Expect = 8.096e-63 Identity = 121/213 (56.81%), Postives = 163/213 (76.53%), Query Frame = -2 Query: 55 HYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKF-IWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHDGPEKHAGVLYGLEV 690 HY+ LK+NV+ L +IQ+GLT SD GNLP G+ +NK+ IW+FNFR+FD+ +D +A DSIELLR GIDF +N + G+DS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT ++LP F ++ V+F +YD+KH+M+FC SL+GGL+++A LDV R VG CHQAGSDSLLT F+K+++ +F+ EK++GVLYGL V Sbjct: 61 HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGT--DNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCTFRKLQENFFI-GSMEKYSGVLYGLGV 268
BLAST of CX296875 vs. ExPASy Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.401e-61 Identity = 121/213 (56.81%), Postives = 158/213 (74.18%), Query Frame = -2 Query: 55 HYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKF-IWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHDGPEKHAGVLYGLEV 690 +Y+ LK NVD L LIQVGLT SD +GNLP G+ +KF IW+FNFR+F+I D +A +SIELLR GIDF++N ++G+D VRF ELMMSSG+V N+++SWVTFH YDFGYLVK+LT + LP +F +L V+F +YD+KH+M FC L+GGL+R+A + V R VG CHQAGSDSLLT +F+K+++ YF EK+ GVLYGL V Sbjct: 61 NYRTLKENVDLLKLIQVGLTFSDENGNLPTCGT---DKFCIWQFNFREFNIGEDIYASESIELLRQCGIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFKLLYVYF-PTVYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLGSFRKLKERYF-PGSTEKYTGVLYGLGV 267
BLAST of CX296875 vs. ExPASy Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.688e-60 Identity = 117/213 (54.93%), Postives = 160/213 (75.12%), Query Frame = -2 Query: 55 HYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHDGP-EKHAGVLYGLEV 690 HY+ LK+NV+ L +IQ+GLT S+ GNLP G+ + IW+FNFR+FD+ +D A DSIELL+ GID +N +G+DS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT ++LP +F ++ V+F +YD+KH+M+FC SL+GGL+++A L+V R VG CHQAGSDSLLT F+K+++ +FV GP K++GVLYGL V Sbjct: 61 HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGT--DKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKLKENFFV--GPLHKYSGVLYGLGV 267
BLAST of CX296875 vs. ExPASy Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 8.972e-54 Identity = 107/211 (50.71%), Postives = 148/211 (70.14%), Query Frame = -2 Query: 58 HYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHDGPEKHAGVLYGLE 690 +Y LK+NV+ L LIQ+GLTLSD GNLP G+ N + IW+FNFR+F++ +D A DSIELLR ID E+N + GVD+ RFAEL+M SG+V N+ + WVTFH YDFGYL+K+L+ + LP + +F + FF +YD+K++M FC +LYGGL+++A L V R VG HQAGSDSLLT F K+++ +F K++G L+GL+ Sbjct: 71 NYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGT--NKQCIWQFNFREFNVISDMFALDSIELLRKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDFFDQMEKFF-PVVYDIKYLMGFCTNLYGGLEKIAELLGVKR-VGISHQAGSDSLLTLRTFIKMKEFFFT-GSLLKYSGFLFGLD 276
BLAST of CX296875 vs. ExPASy Swiss-Prot
Match: CNOT7_XENLA (CCR4-NOT transcription complex subunit 7 OS=Xenopus laevis GN=cnot7 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.062e-46 Identity = 102/210 (48.57%), Postives = 141/210 (67.14%), Query Frame = -2 Query: 61 YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFV-HDGPEKHAGVLYGL 687 Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ +EG+++ FAEL M+SG+V E V W++FHS YDFGYL+KILT +LP +F ILR+FF IYDVK++M+ C++L GGL VA L++ R +G HQAGSDSLLT AF K+R+++F H K+ G LYGL Sbjct: 62 YQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEVEQDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGL 262
BLAST of CX296875 vs. ExPASy Swiss-Prot
Match: CNOT7_MOUSE (CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.062e-46 Identity = 102/210 (48.57%), Postives = 142/210 (67.62%), Query Frame = -2 Query: 61 YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFV-HDGPEKHAGVLYGL 687 Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ +EG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP +F ILR+FF IYDVK++M+ C++L GGL VA L++ R +G HQAGSDSLLT AF K+R+++F H K+ G LYGL Sbjct: 62 YQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGL 262
BLAST of CX296875 vs. ExPASy Swiss-Prot
Match: CNOT7_HUMAN (CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 1.062e-46 Identity = 102/210 (48.57%), Postives = 142/210 (67.62%), Query Frame = -2 Query: 61 YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFV-HDGPEKHAGVLYGL 687 Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ +EG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP +F ILR+FF IYDVK++M+ C++L GGL VA L++ R +G HQAGSDSLLT AF K+R+++F H K+ G LYGL Sbjct: 62 YQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGL 262
BLAST of CX296875 vs. ExPASy Swiss-Prot
Match: CNOT7_CHICK (CCR4-NOT transcription complex subunit 7 OS=Gallus gallus GN=CNOT7 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.062e-46 Identity = 102/210 (48.57%), Postives = 142/210 (67.62%), Query Frame = -2 Query: 61 YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFV-HDGPEKHAGVLYGL 687 Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ +EG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP +F ILR+FF IYDVK++M+ C++L GGL VA L++ R +G HQAGSDSLLT AF K+R+++F H K+ G LYGL Sbjct: 62 YQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGL 262 The following BLAST results are available for this feature:
BLAST of CX296875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296875 ID=CX296875; Name=CX296875; organism=Citrus clementina; type=EST; length=745bpback to top |