CX297729
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: THIK2_ARATH (3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2) HSP 1 Score: 300.442 bits (768), Expect = 5.681e-81 Identity = 152/194 (78.35%), Postives = 161/194 (82.99%), Query Frame = 1 Query: 103 MEKAINRQQVLLEHLRPSNSSSHNYESILXXXXXXXXXXXXYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLL 684 MEKAI RQ+VLLEHLRPS+SSSHNYE+ L Y RTS+YGDDVVIVAA+RT LCKSKRG FKDTYPDDLLAPVL+A+IEKTN++PSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV VRTVNRQCSSGLQ GFYDIGIGAGLESMT NPMAWEGSVNP VK F QAQNCLL Sbjct: 1 MEKAIERQRVLLEHLRPSSSSSHNYEASLSASACLAGDSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLL 194
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: THIK1_ARATH (3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=1 SV=2) HSP 1 Score: 257.684 bits (657), Expect = 4.223e-68 Identity = 134/194 (69.07%), Postives = 148/194 (76.29%), Query Frame = 1 Query: 103 MEKAINRQQVLLEHLRPSNSSSHNYESILXXXXXXXXXXXXYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLL 684 MEKA RQ++LL HL+PS+SS ++ L Y YGDDVVIVAA RTALCK+KRG FKDT+PD+LLA VL+A+IEKTNV+PSEVGDIVVGTVL PGSQRASECRMAAFYAGFPETVP+RTVNRQCSSGLQ GFYDIGIGAGLESMT NP W+GSVNP VK FEQA NCLL Sbjct: 1 MEKATERQRILLRHLQPSSSS----DASLSASACLSKDSAAYQ----YGDDVVIVAAQRTALCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVGTVLGPGSQRASECRMAAFYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPRGWKGSVNPNVKKFEQAHNCLL 186
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: THIK5_ARATH (3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2) HSP 1 Score: 218.394 bits (555), Expect = 2.839e-56 Identity = 114/199 (57.29%), Postives = 146/199 (73.37%), Query Frame = 1 Query: 103 MEKAINRQQVLLEHLRP---SNSSSHNYESILXXXXXXXXXXXXYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEG--SVNPKVKAFEQAQNCLL 684 ME+A+ RQ++LL HL P SNSS + S+L + +GDD+VIVAAYRTA+CK++RGGFKDT PDDLLA VLKAV+E+T++DPSEVGDIVVGTV+APGSQRA ECR+AA++AGFP++VPVRTVNRQCSSGLQ G+YDIGIGAG+ESM+ + + G NP+ + F +A++CLL Sbjct: 1 MERAMERQKILLRHLNPVSSSNSSLKHEPSLLSPVNCVSEVSPM----AAFGDDIVIVAAYRTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPGSQRAMECRVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMSTDHIPGGGFHGSNPRAQDFPKARDCLL 195
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: THIK_HUMAN (3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 4.564e-30 Identity = 67/144 (46.53%), Postives = 95/144 (65.97%), Query Frame = 1 Query: 253 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLL 684 DVV+V RTA+C++ RGGFKDT PD+LL+ V+ AV++ N+ P ++GDI VG VL PG+ A R+A F + PETVP+ TVNRQCSSGLQ G YDIG+ G+ESM++ G++ ++ E+A++CL+ Sbjct: 37 DVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGA-GAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLI 179
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: THIKA_MOUSE (3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.864e-29 Identity = 77/191 (40.31%), Postives = 113/191 (59.16%), Query Frame = 1 Query: 115 INRQQVLLEHL--RPSNSSSHNYESILXXXXXXXXXXXXYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCL 681 ++R QV+L HL RP +SS+ + + S DVV+V RT + ++ RGGFK+T PD+LL+ VL AV++ + P ++GDI VG VL PG+ A R+A F +G PETVP+ TVNRQCSSGLQ G YDIG+ G+ESM+++ M G+++ ++ E+A++CL Sbjct: 1 MHRLQVVLGHLAGRPESSSA----------LQAAPCSARFPQASA--SDVVVVHGRRTPIGRASRGGFKNTTPDELLSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAG-AVMARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSLSGMGNPGNISSRLLESEKARDCL 178
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: THIKB_MOUSE (3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28 Identity = 66/144 (45.83%), Postives = 94/144 (65.28%), Query Frame = 1 Query: 253 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLL 684 DVV+V RT + ++ RG FKDT PD+LL+ VL AV++ + P ++GDI VG VL PG+ A R+A F +G PETVP+ TVNRQCSSGLQ G YDIG+ G+ESMT++ G+++ ++ E+A++CL+ Sbjct: 37 DVVVVHGRRTPIGRASRGCFKDTTPDELLSAVLTAVLQDVKLKPEQLGDISVGNVLQPGAG-AIMARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTLSQRGNHGNISSRLLENEKARDCLI 179
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: THIKB_RAT (3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.468e-28 Identity = 75/190 (39.47%), Postives = 111/190 (58.42%), Query Frame = 1 Query: 115 INRQQVLLEHLRPSNSSSHNYESILXXXXXXXXXXXXYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLL 684 ++R QV+L HL + SS ++ + + S DVV+V RT + ++ RGGFKDT PD+LL+ VL AV++ + P +GDI VG VL PG+ A+ R+A F +G PETVP+ VNRQCSSGLQ G YDIG+ G+ESMT++ G+++ ++ E+A++CL+ Sbjct: 1 MHRLQVVLGHLAGRSESSSALQAA--------PCSAGFPQASA--SDVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLQPGAG-AAMARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTLSERGNPGNISSRLLENEKARDCLI 179
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: THIKA_RAT (3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.120e-27 Identity = 75/192 (39.06%), Postives = 111/192 (57.81%), Query Frame = 1 Query: 115 INRQQVLLEHL--RPSNSSSHNYESILXXXXXXXXXXXXYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLL 684 ++R QV+L HL RP +SS+ + + S DVV+V RT + ++ RGGFKDT PD+LL+ VL AV++ + P +GDI VG VL PG+ A R+A F +G PETVP+ VNRQCSSGLQ G YDIG+ G+ESM+++ G+++ ++ ++A++CL+ Sbjct: 1 MHRLQVVLGHLAGRPESSSA----------LQAAPCSATFPQASA--SDVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLEPGAG-AVMARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSLSNRGNPGNISSRLLESDKARDCLI 179
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: THIK_YARLI (3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica GN=POT1 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.385e-25 Identity = 70/153 (45.75%), Postives = 91/153 (59.48%), Query Frame = 1 Query: 235 TSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVNP---KVKAFEQAQNCLL 684 TS DDVVI AAYRTA K +G FKDT +LLA +L+ +++++ +DP +GD+V G VLA G+ A+E R A AG PETVP +NRQCSSGL G DIGIG G+ESM + SV P K + E+A+ CL+ Sbjct: 23 TSKNPDDVVITAAYRTAHTKGGKGLFKDTSSSELLASLLEGLVKESKIDPKLIGDVVCGNVLAAGA-GATEHRAACLVAGIPETVPFVALNRQCSSGLMAVNDVANKIRAGQIDIGIGCGVESM--SNQYGPNSVTPFSNKFQNNEEAKKCLI 172
BLAST of CX297729 vs. ExPASy Swiss-Prot
Match: THIKB_CANTR (3-ketoacyl-CoA thiolase B, peroxisomal OS=Candida tropicalis PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18 Identity = 56/147 (38.10%), Postives = 78/147 (53.06%), Query Frame = 1 Query: 250 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVN--PMAWEGSVNPKVKAFEQAQNCLL 684 DDVVIVAAYRTA+ K +G F++ + + +L LK I+KTN+DPS + D+ +G VL + A+E R A AG P T VNR CSSGL G + G+ G ESM+ N ++P + Q + CL+ Sbjct: 25 DDVVIVAAYRTAIGKGFKGSFRNVHSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQAA-GATEHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAESMSTNYRDPRVAPRIDPHLADDAQMEKCLI 170 The following BLAST results are available for this feature:
BLAST of CX297729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX297729 ID=CX297729; Name=CX297729; organism=Citrus clementina; type=EST; length=686bpback to top |