CX297736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297736 vs. ExPASy Swiss-Prot
Match: MEMO1_RAT (Protein MEMO1 OS=Rattus norvegicus GN=Memo1 PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.408e-59 Identity = 111/216 (51.39%), Postives = 143/216 (66.20%), Query Frame = 3 Query: 27 IDPTSISRVFLLGPSHHYYTPKCALSTATVYKTPIGDLPLDLEVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHL--IKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHM---LGNCSTKIKIKFLRYEXISQCKT 659 +DP+ R+F+LGPSHH +CALS+ +Y+TP+ DL +D ++ EL TG FE M + DE EHS+EMHLPY AK E H I+P+LVGA++ E +G+LF+KY+ DPSN F VSSDFCHWG RF Y +YD+ G I++SIE LDKMGM IIE DP +F YL +Y NTICGRHPI V L+ L + FL Y SQC++ Sbjct: 66 VDPSITRRIFILGPSHHVPLSRCALSSVDIYRTPLYDLRIDQKIYGELWKTGMFERMSLQTDEDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLADPSNLFVVSSDFCHWGQRFRYSYYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQKSGMNMSFSFLNYAQSSQCRS 281
BLAST of CX297736 vs. ExPASy Swiss-Prot
Match: MEMO1_XENTR (Protein MEMO1 OS=Xenopus tropicalis GN=memo1 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.838e-59 Identity = 112/216 (51.85%), Postives = 143/216 (66.20%), Query Frame = 3 Query: 27 IDPTSISRVFLLGPSHHYYTPKCALSTATVYKTPIGDLPLDLEVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHL--IKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHM---LGNCSTKIKIKFLRYEXISQCKT 659 +DP+ RVF+LGPSHH +CALST +Y+TP+ DL +D +V +L TG FE M + DE EHS+EMHLPY AK E H + IVP+LVGA++ E +G+LF+KY+ DP+N F +SSDFCHWG RF Y +YD+ G I++SIE LDKMGM IIE DP F YL +Y NTICGRHPI V L+ L + FL Y SQC++ Sbjct: 66 VDPSVTRRVFILGPSHHVALSRCALSTVDIYRTPLYDLHIDQKVYGDLWKTGMFERMSLQTDEDEHSIEMHLPYTAKTMESHKDDLTIVPVLVGALSESKEQEFGKLFSKYLADPTNLFVISSDFCHWGQRFRYTYYDESQGEIYRSIENLDKMGMGIIEQLDPVQFSNYLKKYHNTICGRHPIGVLLNAATELQKNGVNMSFSFLNYAQSSQCRS 281
BLAST of CX297736 vs. ExPASy Swiss-Prot
Match: MEMO1_XENLA (Protein MEMO1 OS=Xenopus laevis GN=memo1 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.838e-59 Identity = 112/216 (51.85%), Postives = 143/216 (66.20%), Query Frame = 3 Query: 27 IDPTSISRVFLLGPSHHYYTPKCALSTATVYKTPIGDLPLDLEVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHL--IKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHM---LGNCSTKIKIKFLRYEXISQCKT 659 +DP+ RVF+LGPSHH +CALST +Y+TP+ DL +D +V EL TG FE M + DE EHS+EMHLPY AK E H + IVP+LVGA++ E +G++F+KY+ DP+N F +SSDFCHWG RF Y +YD+ G I++SIE LDKMGM IIE DP F YL +Y NTICGRHPI V L+ L + FL Y SQC++ Sbjct: 66 VDPSVTRRVFILGPSHHVALSRCALSTVDIYRTPLYDLHVDQKVYGELWKTGMFERMSLQTDEDEHSIEMHLPYTAKAMESHKDDLTIVPVLVGALSESKEQEFGKVFSKYLADPTNLFVISSDFCHWGQRFRYTYYDESQGEIYRSIENLDKMGMSIIEQLDPVQFSNYLKKYHNTICGRHPIGVLLNAATELQKNGVNMSFSFLNYAQSSQCRS 281
BLAST of CX297736 vs. ExPASy Swiss-Prot
Match: MEMO1_MOUSE (Protein MEMO1 OS=Mus musculus GN=Memo1 PE=1 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.401e-59 Identity = 111/216 (51.39%), Postives = 143/216 (66.20%), Query Frame = 3 Query: 27 IDPTSISRVFLLGPSHHYYTPKCALSTATVYKTPIGDLPLDLEVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHL--IKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHM---LGNCSTKIKIKFLRYEXISQCKT 659 +DP+ R+F+LGPSHH +CALS+ +Y+TP+ DL +D ++ EL TG FE M + DE EHS+EMHLPY AK E H I+P+LVGA++ E +G+LF+KY+ DPSN F VSSDFCHWG RF Y +YD+ G I++SIE LDKMGM IIE DP +F YL +Y NTICGRHPI V L+ L + FL Y SQC++ Sbjct: 66 VDPSVTRRIFILGPSHHVPLSRCALSSVDIYRTPLYDLRIDQKIYGELWKTGMFERMSLQTDEDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLADPSNLFVVSSDFCHWGQRFRYSYYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQKNGMNMSFSFLNYAQSSQCRS 281
BLAST of CX297736 vs. ExPASy Swiss-Prot
Match: MEMO1_MACFA (Protein MEMO1 OS=Macaca fascicularis GN=MEMO1 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.136e-59 Identity = 111/215 (51.63%), Postives = 142/215 (66.05%), Query Frame = 3 Query: 27 IDPTSISRVFLLGPSHHYYTPKCALSTATVYKTPIGDLPLDLEVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHL--IKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHM---LGNCSTKIKIKFLRYEXISQCK 656 +DP+ R+F+LGPSHH +CALS+ +Y+TP+ DL +D ++ EL TG FE M + DE EHS+EMHLPY AK E H I+P+LVGA++ E +G+LF+KY+ DPSN F VSSDFCHWG RF Y +YD+ G I++SIE LDKMGM IIE DP +F YL +Y NTICGRHPI V L+ L + FL Y SQC+ Sbjct: 66 VDPSITRRIFILGPSHHVPLSRCALSSVDIYRTPLYDLRIDQKIYGELWKTGMFERMSLQTDEDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLADPSNLFVVSSDFCHWGQRFRYSYYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQKNGMNMSFSFLNYAQSSQCR 280
BLAST of CX297736 vs. ExPASy Swiss-Prot
Match: MEMO1_HUMAN (Protein MEMO1 OS=Homo sapiens GN=MEMO1 PE=1 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.136e-59 Identity = 111/215 (51.63%), Postives = 142/215 (66.05%), Query Frame = 3 Query: 27 IDPTSISRVFLLGPSHHYYTPKCALSTATVYKTPIGDLPLDLEVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHL--IKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHM---LGNCSTKIKIKFLRYEXISQCK 656 +DP+ R+F+LGPSHH +CALS+ +Y+TP+ DL +D ++ EL TG FE M + DE EHS+EMHLPY AK E H I+P+LVGA++ E +G+LF+KY+ DPSN F VSSDFCHWG RF Y +YD+ G I++SIE LDKMGM IIE DP +F YL +Y NTICGRHPI V L+ L + FL Y SQC+ Sbjct: 66 VDPSITRRIFILGPSHHVPLSRCALSSVDIYRTPLYDLRIDQKIYGELWKTGMFERMSLQTDEDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLADPSNLFVVSSDFCHWGQRFRYSYYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQKNGMNMSFSFLNYAQSSQCR 280
BLAST of CX297736 vs. ExPASy Swiss-Prot
Match: MEMO1_DANRE (Protein MEMO1 OS=Danio rerio GN=memo1 PE=2 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 5.349e-59 Identity = 112/215 (52.09%), Postives = 140/215 (65.12%), Query Frame = 3 Query: 27 IDPTSISRVFLLGPSHHYYTPKCALSTATVYKTPIGDLPLDLEVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHL--IKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHMLGNCSTK---IKIKFLRYEXISQCK 656 +DP+ RVF+LGPSHH +CALS A VY+TP+ DL +D +V +L TG FE M + DE EHS+EMHLPY AK E H IVP+LVGA++ E YG+L +KY+ DPSN F +S DFCHWG RF Y +YD+ G I++SIE LDKMGM IIE DP +F YL +Y NTICGRHPI V L+ + + FL Y SQC+ Sbjct: 66 VDPSITRRVFILGPSHHVPLSRCALSPAEVYRTPLYDLRIDQKVYADLWKTGMFERMSLQTDEDEHSIEMHLPYTAKAMENHKDEFSIVPVLVGALSGSKEQEYGKLLSKYLADPSNLFIISPDFCHWGQRFRYTYYDESQGEIYRSIEHLDKMGMGIIEQLDPISFSNYLKKYHNTICGRHPIGVLLNAVAELKKNGIDMNFSFLNYAQSSQCR 280
BLAST of CX297736 vs. ExPASy Swiss-Prot
Match: MEMO1_BOVIN (Protein MEMO1 OS=Bos taurus GN=MEMO1 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 6.539e-57 Identity = 103/191 (53.93%), Postives = 134/191 (70.16%), Query Frame = 3 Query: 27 IDPTSISRVFLLGPSHHYYTPKCALSTATVYKTPIGDLPLDLEVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHL--IKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHML 593 +DP+ R+F+LGPSHH +CALS+ +Y+TP+ DL +D ++ EL TG FE M + DE EHS+EMHLPY AK E H I+P+LVGA++ E +G+LF+KY+ +PSN F VSSDFCHWG RF Y +YD+ G I++SIE LDKMGM IIE DP +F YL +Y NTICGRHPI V L+ + Sbjct: 66 VDPSITRRIFILGPSHHVPLSRCALSSVDIYRTPLYDLRIDQKIYGELWKTGMFERMSLQTDEDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLAEPSNLFVVSSDFCHWGQRFRYSYYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAI 256
BLAST of CX297736 vs. ExPASy Swiss-Prot
Match: MEMO1_DICDI (Protein MEMO1 homolog OS=Dictyostelium discoideum GN=memo1 PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.154e-53 Identity = 105/211 (49.76%), Postives = 137/211 (64.93%), Query Frame = 3 Query: 24 NIDPTSISRVFLLGPSHHYYTPKCALSTATVYKTPIGDLPLDLEVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHLIK--IVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGVIHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFLHMLGNCSTKIKIKFLRYEXISQ 650 N+ P + RVF+LGPSHH Y C L+ ++TPIG+L +D + +L TG F VDE EHS+E+ LPY+AKV E L++ IVPI+VG+++ + E +YG++ A Y DDP NFF +SSDFCHWG RF Y Y+ K I+K IE LD+ GM+IIE+GDP F KYL E NTICGR PI+V L + N K I L YE S+ Sbjct: 60 NLIPENYKRVFILGPSHHVYMKTCGLTKLDTWETPIGNLKVDKDTTNKLFDTGSFIWNTKSVDEDEHSLELQLPYIAKVAEKRLLELSIVPIMVGSLSIDLEELYGKILAPYFDDPENFFVISSDFCHWGERFGYTRYENKEVPIYKYIEELDRKGMEIIESGDPVQFSKYLKETKNTICGRCPIAVMLWITKNSQFKYNISSLYYEQSSK 270
BLAST of CX297736 vs. ExPASy Swiss-Prot
Match: TG253_CAEEL (UPF0103 protein tag-253 OS=Caenorhabditis elegans GN=tag-253 PE=2 SV=3) HSP 1 Score: 186.422 bits (472), Expect = 1.367e-46 Identity = 88/184 (47.83%), Postives = 126/184 (68.48%), Query Frame = 3 Query: 36 TSISRVFLLGPSHHYYTPKCALSTATVYKTPIGDLPLDLEVIEELKATGKFELMDICVDEAEHSMEMHLPYLAKVFEGHLIKIVPILVGAVNAENEAMYGRLFAKYVDDPSNFFSVSSDFCHWGSRFNYMHYDKKHGV-IHKSIEALDKMGMDIIETGDPDAFKKYLLEYDNTICGRHPISVFL 584 +++ RVF+LGPSH CA++T + Y+TP+GDL +D ++ EEL+AT F+LMD +E+EHS+EM LP++AKV IVP+LVG++ + YG +FA Y++DP N F +SSDFCHWG RF++ YD+ + I++ I +DK GM IET +P AF YL + NTICGR+PI + L Sbjct: 120 SAVERVFILGPSHVVALNGCAITTCSKYRTPLGDLIVDHKINEELRATRHFDLMDRRDEESEHSIEMQLPFIAKVMGSKRYTIVPVLVGSLPGSRQQTYGNIFAHYMEDPRNLFVISSDFCHWGERFSFSPYDRHSSIPIYEQITNMDKQGMSAIETLNPAAFNDYLKKTQNTICGRNPILIML 303 The following BLAST results are available for this feature:
BLAST of CX297736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX297736 ID=CX297736; Name=CX297736; organism=Citrus clementina; type=EST; length=741bpback to top |