CX297940
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297940 vs. ExPASy Swiss-Prot
Match: MCCA_SOYBN (Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Glycine max GN=MCCA PE=1 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 2.842e-40 Identity = 83/151 (54.97%), Postives = 113/151 (74.83%), Query Frame = 2 Query: 2 EEMASYISEVKATYLGEHKFRVEFDVVSMDVHLAVYNKGRIKXXXXXXXXXXXXFKQKLGLELPDEDETQHKTSFETATGPPGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQ 454 E+ S + EVK+TY+ ++ FRVE V DV++AVY+K +I+ F++KLGLEL +++E+QHK ET+ P G+V++PMAGLVVKVL + T+VEEGQP+LVLEAMKMEHVVKAP++G VHGLQ+ G+QVSDGSVLF ++ Sbjct: 579 EQNGSPVLEVKSTYVKDNYFRVEAAGVINDVNVAVYSKDQIRHIHIWQGSCHHYFREKLGLELSEDEESQHKPKVETSANPQGTVVAPMAGLVVKVLVENKTRVEEGQPVLVLEAMKMEHVVKAPSSGYVHGLQLMVGEQVSDGSVLFSVK 729
BLAST of CX297940 vs. ExPASy Swiss-Prot
Match: MCCA_ARATH (Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Arabidopsis thaliana GN=MCCA PE=1 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 1.614e-35 Identity = 78/145 (53.79%), Postives = 104/145 (71.72%), Query Frame = 2 Query: 26 EVKATYLGEHKFRVEFDVVSMDVHLAVYNKGRIKXXXXXXXXXXXXFKQKLGLELPDEDE-TQHKTSFETATGPPGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQG 457 E++ T G+ FRVE +SM+V LA Y K K FKQK+G+E +++E QH+TS ET++ PPG++++PMAGLVVKVL + KV++GQPILVLEAMKMEHVVKAP++G + L+V AGQQVSDGS LFR++G Sbjct: 590 ELRVTRAGKCDFRVEAAGLSMNVSLAAYLKDGYKHIHIWHGSEHHQFKQKVGIEFSEDEEGVQHRTSSETSSHPPGTIVAPMAGLVVKVLVENEAKVDQGQPILVLEAMKMEHVVKAPSSGSIQDLKVKAGQQVSDGSALFRIKG 734
BLAST of CX297940 vs. ExPASy Swiss-Prot
Match: MCCA_ORYSJ (Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Oryza sativa subsp. japonica GN=MCCA PE=2 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 7.016e-31 Identity = 71/143 (49.65%), Postives = 89/143 (62.24%), Query Frame = 2 Query: 26 EVKATYLGEHKFRVEFDVVSMDVHLAVYNKGRIKXXXXXXXXXXXXFKQKLGLELPDEDETQHKTSFETATGPPGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQ 454 +VK G+H FRV+ + DV LA Y+K ++Q L E +D +Q S E + P GSVL+PMAGLVVKVL DG +VEEGQP++V+EAMKMEHVVKAP G V GL+ TAGQQV D SVLF ++ Sbjct: 590 DVKVDSRGDHDFRVDVGGLQTDVTLAFYSKDNCNHIHIWHGKHHHHYRQTLRAEQSPDDSSQPSASSEARSHPKGSVLAPMAGLVVKVLLKDGARVEEGQPVMVMEAMKMEHVVKAPCAGYVEGLKATAGQQVFDSSVLFTVK 732
BLAST of CX297940 vs. ExPASy Swiss-Prot
Match: BCCP_SOLLC (Biotin carboxyl carrier protein of acetyl-CoA carboxylase (Fragment) OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.051e-18 Identity = 45/69 (65.22%), Postives = 53/69 (76.81%), Query Frame = 2 Query: 248 GSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQ 454 G+V++PM GL VKVL DG KV+EGQP+LVLEAMKMEHVVKAP G V GL++ GQ V DG LF L+ Sbjct: 1 GTVVAPMVGLEVKVLVKDGEKVQEGQPVLVLEAMKMEHVVKAPANGYVSGLEIKVGQSVQDGIKLFALK 69 The following BLAST results are available for this feature:
BLAST of CX297940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX297940 ID=CX297940; Name=CX297940; organism=Citrus clementina; type=EST; length=595bpback to top |