CX297941

Overview
NameCX297941
Unique NameCX297941
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297941 vs. ExPASy Swiss-Prot
Match: GLO2O_ARATH (Hydroxyacylglutathione hydrolase 3, mitochondrial OS=Arabidopsis thaliana GN=GLY3 PE=1 SV=2)

HSP 1 Score: 357.836 bits (917), Expect = 3.051e-98
Identity = 171/215 (79.53%), Postives = 191/215 (88.84%), Query Frame = 1
Query:   43 PALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXXDLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRLTKDEETFKSIMENLNLSYPKMIDIAVPANLVCGMQDLTSK 687
            PALLIDPVDKTVDRDL +I ELGLKL+YAMNTHVHADHVTGTGL+K+K+PGV            DL +E GDKVS GD++LEVRATPGHT GCVTYV+GEG DQPQPRMAFTGDA+LIRGCGRTDFQ GSS QLY+SVHSQIFTLPKDTLIYPAHDYKGF VSTVGEE+Q+NPRLTKD+ETFK+IM NLNLSYPKMID+AVPAN+VCG+QD+ S+
Sbjct:   40 PALLIDPVDKTVDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKLPGVKSVISKASGSKADLFLEPGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLIRGCGRTDFQEGSSDQLYESVHSQIFTLPKDTLIYPAHDYKGFEVSTVGEEMQHNPRLTKDKETFKTIMSNLNLSYPKMIDVAVPANMVCGLQDVPSQ 254          
BLAST of CX297941 vs. ExPASy Swiss-Prot
Match: ETHE1_HUMAN (Protein ETHE1, mitochondrial OS=Homo sapiens GN=ETHE1 PE=1 SV=2)

HSP 1 Score: 245.743 bits (626), Expect = 1.689e-64
Identity = 126/213 (59.15%), Postives = 148/213 (69.48%), Query Frame = 1
Query:   46 ALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXXDLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRLTKDEETFKSIMENLNLSYPKMIDIAVPANLVCGMQDLTS 684
            A+LIDPV +T  RD  +IKELGL+L+YA+NTH HADH+TG+GL++S +PG             DLH+E GD + FG   LE RA+PGHT GCVT+V  +        MAFTGDALLIRGCGRTDFQ G +  LY SVH +IFTLP D LIYPAHDY GFTVSTV EE   NPRLT   E F  IM NLNL  P+ ID AVPAN+ CG+Q  T+
Sbjct:   48 AVLIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLNDHS------MAFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHDYHGFTVSTVEEERTLNPRLTLSCEEFVKIMGNLNLPKPQQIDFAVPANMRCGVQTPTA 254          
BLAST of CX297941 vs. ExPASy Swiss-Prot
Match: ETHE1_MOUSE (Protein ETHE1, mitochondrial OS=Mus musculus GN=Ethe1 PE=1 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 1.430e-63
Identity = 123/209 (58.85%), Postives = 146/209 (69.86%), Query Frame = 1
Query:   46 ALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXXDLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRLTKDEETFKSIMENLNLSYPKMIDIAVPANLVCGMQ 672
            A+LIDPV +T  RD  +IKELGLKL+YA+NTH HADH+TGTG+++S +PG             DLH+  GD + FG   LE RA+PGHT GCVT+V  +        MAFTGDALLIRGCGRTDFQ G +  LY SVH +IFTLP + LIYPAHDY G TVSTV EE   NPRLT   E F  +M+NLNL  P+ IDIAVPAN+ CG+Q
Sbjct:   48 AVLIDPVLETAHRDAQLIKELGLKLLYAVNTHCHADHITGTGVLRSLLPGCQSVISRLSGAQADLHIGEGDSIRFGRFALETRASPGHTPGCVTFVLND------QSMAFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGNCLIYPAHDYHGLTVSTVEEERTLNPRLTLSCEEFIKVMDNLNLPKPQQIDIAVPANMRCGVQ 250          
BLAST of CX297941 vs. ExPASy Swiss-Prot
Match: ETHE1_BOVIN (Protein ETHE1, mitochondrial OS=Bos taurus GN=ETHE1 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.601e-62
Identity = 119/209 (56.94%), Postives = 144/209 (68.90%), Query Frame = 1
Query:   46 ALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXXDLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRLTKDEETFKSIMENLNLSYPKMIDIAVPANLVCGMQ 672
            A+LIDPV +T  RD  ++KELGL+L+YA+NTH HADH+TG+GL++S +PG             D H+E GD + FG   LE RA+PGHT GCVT+V  +        MAFTGDALLIRGCGRTDFQ G +  LY SVH +IFTLP + LIYPAHDY G TVSTV EE   NPRLT   E F  +M+ LNL  P+ ID AVPAN+ CG+Q
Sbjct:   48 AVLIDPVLETAQRDAQLVKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADWHIEDGDSIQFGRFALETRASPGHTPGCVTFVLNDHS------MAFTGDALLIRGCGRTDFQQGCAETLYHSVHEKIFTLPGNCLIYPAHDYHGLTVSTVEEERTLNPRLTLSCEEFVKVMDKLNLPKPQQIDFAVPANMRCGIQ 250          
BLAST of CX297941 vs. ExPASy Swiss-Prot
Match: BLH_AGRT5 (Beta-lactamase hydrolase-like protein OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=blh PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.186e-17
Identity = 74/221 (33.48%), Postives = 99/221 (44.80%), Query Frame = 1
Query:   79 DRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIK----------SKVPGVXXXXXXXXXXXX--------DLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLI--RGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYK-----GFTVSTVGEEIQYNPRLT-KDEETFKSIME--NLNLSYPKMIDIAVPANL 657
            D  L+ +K  GL + + ++TH HADH +    +K          +KV GV                    D   E GD+ S G L   V  +PGHTL  VTYV G          AF  D L +   G  R DF GGS+ QL+ S+   I  LP DT ++  HDY+         STVGE+ + NP L    EE F  + E  +  L  PK+I  A+  N+
Sbjct:  192 DAILDYVKRHGLSVEWILDTHPHADHFSAADYLKQKTGAKTAIGAKVTGVQKLWQEKYNWSDFKTDGSQWDQLFEAGDRFSIGSLEARVLFSPGHTLASVTYVVGNA--------AFVHDTLFMPDSGTARADFPGGSAKQLWASI-QDILALPDDTRLFTGHDYQPGGRAPKWESTVGEQTRSNPHLAGMTEEDFVRLREARDRTLPMPKLILHALQVNI 403          
BLAST of CX297941 vs. ExPASy Swiss-Prot
Match: GLO2_BOVIN (Hydroxyacylglutathione hydrolase, mitochondrial OS=Bos taurus GN=HAGH PE=2 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15
Identity = 47/156 (30.13%), Postives = 76/156 (48.72%), Query Frame = 1
Query:   46 ALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXXDLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 513
            A ++DPV     + +   ++ G+KL   + TH H DH  G   +    PG+               V H   +  G L ++  +TP HT G + Y   + P+ P+P   FTGD L + GCG+  F  G++ ++YK++   +  LP DT +Y  H+Y
Sbjct:   73 AAIVDPVQP--QKVVETARKHGVKLTTVLTTHHHWDHAGGNEKLVKLEPGLKVYGGDDRIGALTHKVTHLSTLQVGSLHVKCLSTPCHTSGHICYFVTK-PNSPEPPAVFTGDTLFVAGCGK--FYEGTADEMYKALLEVLGRLPADTRVYCGHEY 223          
BLAST of CX297941 vs. ExPASy Swiss-Prot
Match: HAGHL_HUMAN (Hydroxyacylglutathione hydrolase-like protein OS=Homo sapiens GN=HAGHL PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.572e-14
Identity = 45/144 (31.25%), Postives = 73/144 (50.69%), Query Frame = 1
Query:   82 RDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXXDLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 513
            R L ++   G+ L   + TH H DH  G   +    PG+               + HG+++ FG + +    TPGHT G ++Y   E  D P P   F+GDAL + GCG      GS+ Q+Y+S+ +++ TLP +T ++  H++
Sbjct:   35 RLLEIVGREGVSLTAVLTTHHHWDHARGNPELARLRPGLAVLGADERIFSLTRRLAHGEELRFGAIHVRCLLTPGHTAGHMSYFLWE-DDCPDPPALFSGDALSVAGCG--SCLEGSAQQMYQSL-AELGTLPPETKVFCGHEH 174          
BLAST of CX297941 vs. ExPASy Swiss-Prot
Match: GLO2_MOUSE (Hydroxyacylglutathione hydrolase, mitochondrial OS=Mus musculus GN=Hagh PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.572e-14
Identity = 46/156 (29.49%), Postives = 73/156 (46.79%), Query Frame = 1
Query:   46 ALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXXDLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 513
            A ++DPV     + +   K+  +KL   + TH H DH  G   +    PG+               V H   +  G L ++  +TP HT G + Y   + P   +P   FTGD L + GCG+  F  G++ ++YK++   +  LP DT +Y  H+Y
Sbjct:   74 AAIVDPVQP--QKVIEAAKKHHVKLTTVLTTHHHWDHAGGNEKLVKLEPGLKVYGGDDRIGALTHKVTHLSTLQVGSLSVKCLSTPCHTSGHICYFVSK-PGSSEPSAVFTGDTLFVAGCGK--FYEGTADEMYKALLEVLGRLPPDTKVYCGHEY 224          
BLAST of CX297941 vs. ExPASy Swiss-Prot
Match: HAGHL_MOUSE (Hydroxyacylglutathione hydrolase-like protein OS=Mus musculus GN=Haghl PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14
Identity = 53/204 (25.98%), Postives = 87/204 (42.65%), Query Frame = 1
Query:   79 DRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXXDLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTV--------------------------------STVGEEIQYNPRLTKDEETFKS 594
            +R L +    G+ L   ++TH H DH  G   +   +PG+               +EHG+ + FG + +    TPGHT G ++Y   E  D P     F+GDAL + GCG       ++ Q+Y+S+   + TLP +T ++  H++    +                                ST+GEE+ YNP L   E+  ++
Sbjct:   34 ERLLEIAGREGVSLTMVLSTHHHWDHTRGNAELAHILPGLAVLGADERICALTRRLEHGEGLQFGAIHVRCLLTPGHTSGHMSYFLWE-DDCPDSPALFSGDALSVAGCGW--HLEDTAQQMYQSLAKTLGTLPPETKVFCGHEHTLSNLEFAQKVEPCNEHVQAKLSWAQERDDEDIPTVPSTLGEELMYNPFLRVTEDAVRA 234          
BLAST of CX297941 vs. ExPASy Swiss-Prot
Match: GLO2C_ARATH (Hydroxyacylglutathione hydrolase cytoplasmic OS=Arabidopsis thaliana GN=GLX2-2 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.039e-13
Identity = 51/159 (32.08%), Postives = 83/159 (52.20%), Query Frame = 1
Query:   46 ALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXXDLH-VEHGDKVSFG-DLFLEVRATPGHTLGCVTY-VSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 513
            A ++DPVD   ++ +   ++   K+ + + TH H DH  G   IK  VP +                V++GDK++ G D+ +    TP HT G ++Y V+G+  + P     FTGD L + GCG+  F  G++ Q+Y+S+   +  LPK T +Y  H+Y
Sbjct:   25 AAVVDPVDP--EKVIASAEKHQAKIKFVLTTHHHWDHAGGNEKIKQLVPDIKVYGGSLDKVKGCTDAVDNGDKLTLGQDINILALHTPCHTKGHISYYVNGKEGENPA---VFTGDTLFVAGCGK--FFEGTAEQMYQSLCVTLAALPKPTQVYCGHEY 176          
The following BLAST results are available for this feature:
BLAST of CX297941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
GLO2O_ARATH3.051e-9879.53Hydroxyacylglutathione hydrolase 3, mitochondrial ... [more]
ETHE1_HUMAN1.689e-6459.15Protein ETHE1, mitochondrial OS=Homo sapiens GN=ET... [more]
ETHE1_MOUSE1.430e-6358.85Protein ETHE1, mitochondrial OS=Mus musculus GN=Et... [more]
ETHE1_BOVIN4.601e-6256.94Protein ETHE1, mitochondrial OS=Bos taurus GN=ETHE... [more]
BLH_AGRT51.186e-1733.48Beta-lactamase hydrolase-like protein OS=Agrobacte... [more]
GLO2_BOVIN1.450e-1530.13Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
HAGHL_HUMAN3.572e-1431.25Hydroxyacylglutathione hydrolase-like protein OS=H... [more]
GLO2_MOUSE3.572e-1429.49Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
HAGHL_MOUSE4.665e-1425.98Hydroxyacylglutathione hydrolase-like protein OS=M... [more]
GLO2C_ARATH1.039e-1332.08Hydroxyacylglutathione hydrolase cytoplasmic OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionC06006H05SK RindPdig24 Citrus clementina cDNA clone C06006H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297941 ID=CX297941; Name=CX297941; organism=Citrus clementina; type=EST; length=692bp
GATTCGGCCGAGGCTTCTTGCTGACGTCAATCATCCCGATAACCAGCTCT
GTTGATTGACCCTGTCGACAAGACCGTTGATAGAGACCTGAATGTTATTA
AAGAACTGGGATTGAAGCTTGTATATGCCATGAACACCCATGTACATGCT
GATCATGTCACTGGAACGGGTCTCATTAAGAGTAAGGTTCCGGGAGTGAA
ATCTATTATATCAAAAGCAAGTGGTTCCAAGGCTGATCTTCATGTTGAAC
ATGGGGATAAAGTCTCTTTCGGTGATCTCTTCCTTGAGGTTCGTGCTACT
CCTGGCCATACGTTGGGTTGTGTTACCTATGTTTCTGGTGAAGGACCTGA
TCAGCCTCAACCAAGGATGGCATTCACTGGAGATGCCTTACTGATACGTG
GATGCGGGAGGACTGATTTTCAGGGTGGAAGTTCAAGTCAGCTCTACAAG
TCAGTGCATTCACAGATATTTACTTTGCCGAAGGACACATTAATCTACCC
GGCTCATGATTACAAGGGATTCACAGTAAGCACAGTGGGAGAGGAGATTC
AGTACAATCCTCGCCTAACGAAAGATGAGGAAACATTCAAATCCATAATG
GAAAATTTAAACCTGTCATATCCAAAGATGATAGACATAGCAGTTCCGGC
AAATTTGGTTTGTGGAATGCAAGATCTGACCTCCAAGCCTGA
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