CX298081

Overview
NameCX298081
Unique NameCX298081
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length659
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX298081 vs. ExPASy Swiss-Prot
Match: DR206_PEA (Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11
Identity = 43/132 (32.58%), Postives = 67/132 (50.76%), Query Frame = 1 
Query:  166 YWHDI----QSGQNPTSISVVRPPTNTST-----NGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVDLLMAMNFAFIEGKYNGSSITVLGRNPVFSKMREMPVIGGSGLFRFARGYVQARTHNFD 534
            Y+HDI    ++  N TS  V  P   + T     + FG I + D+P+T    +SSK VGRAQGFY   ++      ++  F  +   ++  +IT  G +P+ +K R++ V GG+G F   RG     T  F+
Sbjct:   37 YFHDILYNGKNAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLSSKQVGRAQGFYIYDTKNTYTSWLSFTFV-LNSTHHQGTITFAGADPIVAKTRDISVTGGTGDFFMHRGIATITTDAFE 167
The following BLAST results are available for this feature:
BLAST of CX298081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DR206_PEA9.744e-1132.58Disease resistance response protein 206 OS=Pisum s... [more]
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Properties
Property NameValue
Genbank descriptionC06008D06SK RindPdig24 Citrus clementina cDNA clone C06008D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298081 ID=CX298081; Name=CX298081; organism=Citrus clementina; type=EST; length=659bp
AGGATTCGATCCATGGCTAGATTTCTTCCAATCTTTGCTACCCAAATCAT
CTTTCTCCTCTTTCTCCTCTCTTCCTTCACCAAAATTCAAGTCCACGGCT
ATGCCAAGACCATGAACAAAAACCTAATGGGGCTGAAGAAAGAAAAACTA
ACCCATTTTCAAATCTACTGGCACGACATCCAAAGTGGCCAAAACCCTAC
TTCAATCTCAGTAGTGAGGCCACCCACAAACACATCAACAAACGGTTTTG
GCATAATAAATATGATTGATAATCCACTCACTGCAGGGCCAGAAATGAGC
TCAAAAATGGTGGGAAGGGCACAAGGGTTTTATGCACTAGCTTCACAGGA
AGAAGTTGACCTGTTAATGGCCATGAATTTTGCTTTCATTGAAGGGAAAT
ACAATGGCAGCAGCATCACTGTGCTTGGAAGAAACCCAGTGTTTTCAAAG
ATGAGAGAGATGCCAGTCATTGGGGGCAGTGGGCTTTTCAGGTTTGCAAG
AGGTTATGTTCAAGCTAGAACCCACAACTTTGATCCGAAAACAGGGGATG
CTACAGTTCAGTATAATGTCTATGTGATGCATTATTGATGATATAATCGG
TTTCGCTTTTGGTCCTTTTCTTCTTTGTTTTTATTAATAAAAGTATTCTC
TTTTTTATT
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