CX298307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX298307 vs. ExPASy Swiss-Prot
Match: SERA_ARATH (D-3-phosphoglycerate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At1g17745 PE=1 SV=2) HSP 1 Score: 297.36 bits (760), Expect = 5.930e-80 Identity = 148/209 (70.81%), Postives = 181/209 (86.60%), Query Frame = 1 Query: 1 LGRLAVQLVAGGSGVKTVKVSYASSRAPDDLDTRLLRAMITKGLIEPISDVFVNLVNADYTAKQRGLRLTEERILLDGSPESPLEFIQVQIANVESKFASAISESGEIKVEGRVKDGVPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVDEQPRKETLKKIGDVPAIEEFVFLKL 627 LGRLAVQL +GG GV++++V Y S+R DDLDTRLLRAMITKG+IEPISD +VNLVNAD+ AKQ+GLR++EER+++D SPE P++ IQVQI NVES FA A+S++G+I +EG+VK GVPHLT VGSF VDVSLEG++ILCRQVDQPGMIG VG+ILG +NVNV+FMSVGR RK A+MAIGVDE+P +TL++IG V AIEEFVFLKL Sbjct: 416 LGRLAVQLASGGKGVQSIRVVYRSARDRDDLDTRLLRAMITKGIIEPISDSYVNLVNADFIAKQKGLRISEERMVVDSSPEYPVDSIQVQILNVESNFAGAVSDAGDISIEGKVKYGVPHLTCVGSFGVDVSLEGNLILCRQVDQPGMIGQVGNILGEQNVNVNFMSVGRTVLRKQAIMAIGVDEEPDNKTLERIGGVSAIEEFVFLKL 624
BLAST of CX298307 vs. ExPASy Swiss-Prot
Match: SERA_METJA (D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii GN=serA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.878e-17 Identity = 59/214 (27.57%), Postives = 103/214 (48.13%), Query Frame = 1 Query: 1 LGRLAVQLVAGGSGVKTVKVSYASSRAPDDLDTRLLRAMITKGLIEPISDVFVNLVNADYTAKQRGLRLTEERILLDGSPESPLEFIQVQIANVESKFASAI-----SESGEIKVEGRVKDGVPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVDEQPRKETLKKIGDVPAIEEFVFLKL 627 LG + +Q++ G V V++ Y+ A + D L++ KGL+ PI +NLVNA AK R + + E + E K+ +AI S+ + + G + + P + +V +EV EG + + + +D+PG IG V LG +N++ M VGR P +VM + +D +E ++KI ++P I++ + L Sbjct: 334 LGNIVMQVLDGS--VNRVELIYSGELAKEKTD--LIKRAFLKGLLSPILLAGINLVNAPIIAKNRNINVVES-------------------STSEEKYGNAIKITAESDKKKFSIVGAIINNKPVILEVDGYEVSFIPEGVLAIIKHIDRPGTIGRVCITLGDYGINIASMQVGRKEPGGESVMLLNLDHTVPEEVIEKIKEIPNIKDVAVINL 524
BLAST of CX298307 vs. ExPASy Swiss-Prot
Match: SERA_METTH (D-3-phosphoglycerate dehydrogenase OS=Methanobacterium thermoautotrophicum GN=serA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.916e-15 Identity = 60/210 (28.57%), Postives = 104/210 (49.52%), Query Frame = 1 Query: 1 LGRLAVQLVAGGSGVKTVKVSYASSRAPDDLDTRLLRAMITKGLIEPISDVFVNLVNADYTAKQRGLRLTEERILLDGSPESPLEFIQVQIANVESKFASAISESGEIKVEG-RVKDGVPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVDEQPRKETLKKIGDVPAIEEFVFLKL 627 +G + Q + G ++ + V+Y A D L R M+ + ++ PI VNL+NA AK+RG+ +TE R S + A+A S+ G VE +K+ P + + + VDV EG++I+ R D PG IG +G+ LG +N++ M VGR AVM + VD+ E ++++ + +++ V +++ Sbjct: 335 MGAIIAQALPGN--IEKLDVTYCGELAEMQFDI-LTRTML-QAILNPILTEPVNLINAPSIAKKRGIMVTEARRSESDGYRSII-------------IATAESDRGGFSVEATHIKE--PTIIGINGYRVDVKPEGTMIIARYRDLPGTIGAIGTKLGQHGINIATMQVGRKEIGGEAVMVLKVDQSVPAEVIEEVKKLDNVDDAVAIEI 525
BLAST of CX298307 vs. ExPASy Swiss-Prot
Match: SERA_SYNY3 (D-3-phosphoglycerate dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=serA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.819e-12 Identity = 53/170 (31.18%), Postives = 81/170 (47.65%), Query Frame = 1 Query: 124 KGLIEPISDVFVNLVNADYTAKQRGLRLTEERILLDGSPESPLEFIQVQIANV--ESKFASAISESGEIKVEGRVKDGVPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVDEQPRKETLKKIGDVPAIEEFVFLKL 627 KGL+ VN VNA AK+RG+R+ E + D S + ++ E A+ +GEI++ T V F ++V ++ D PG+IG +GS+LGS NVN++ M VGR R A+MA+ +D+ L +I V I + +KL Sbjct: 399 KGLLSQALRERVNYVNAAIEAKERGIRVIETK---DASVRDYSGSLHLKATGTMGEHSATGALLSNGEIRI-----------TDVDEFPINVPPNNYMLFTLHRDMPGIIGKIGSLLGSFNVNIASMQVGRKIVRGDAIMALSLDDPLPDGLLSEITKVAGIRDAYTVKL 554
BLAST of CX298307 vs. ExPASy Swiss-Prot
Match: SERA_ARCFU (D-3-phosphoglycerate dehydrogenase OS=Archaeoglobus fulgidus GN=serA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.103e-12 Identity = 54/200 (27.00%), Postives = 97/200 (48.50%), Query Frame = 1 Query: 34 GSGVKTVKVSYASSRAPDDLDTRLLRAMITKGLIEPISDVFVNLVNADYTAKQRGLRLTEERILLDGSPESPLEFIQVQIANVESKFASAISESGEIKVEGRVKDGVPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAV--MAIGVDEQPRKETLKKIGDVPAIEEFVFLKL 627 G ++ VKV+ + A + T + + KGL EPI +NLV+A A +RG+ + E ++ ES LE + V+ S E+ + G + K+ + V+ +G I+ D+PG+IG VG++ G N+N++ M VGR + + M + VD+ P E L+++ + I + +++L Sbjct: 343 GGAIRKVKVTCSGKLATKN--TEFVTRALLKGLFEPILSNEINLVSAKPVAVERGITIEESKVESVEHYESLLE-VWVE------------SNGKEMYLAGTCFGNEYRILKIDVYNVNFVPKGHYIISLHEDKPGVIGRVGTLFGRNNINIAGMIVGRSGDKPGGIQLMLLLVDDPPTPEVLEEMTKLDGIIDATYVEL 527
BLAST of CX298307 vs. ExPASy Swiss-Prot
Match: SERA_BACSU (D-3-phosphoglycerate dehydrogenase OS=Bacillus subtilis GN=serA PE=3 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 4.052e-12 Identity = 54/190 (28.42%), Postives = 87/190 (45.79%), Query Frame = 1 Query: 43 VKTVKVSYASSRAPDDLDTRLLRAMITKGLIEPISDVFVNLVNADYTAKQRGLRLTEERILLDGSPESPLEFIQVQIANVESKF---ASAISESGEIKVEGRVKDGVPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVDEQPRKETLKKIGDVPAI 603 V+ V + Y + A L+T + + G ++P D VN VNA AK+RG+ +E+ + S I V++ S F A+ I GE VE + F +D G ++ + D G+IG VG ILG ++N++ M VGR A+M + D + +K++ +VP I Sbjct: 344 VQDVAIQYEGTIAK--LETSFITKALLSGFLKPRVDSTVNEVNAGGVAKERGISFSEK---ISSSESGYDNCISVKVTGDRSTFTVTATYIPHFGERIVE------------INGFNIDFYPTGHLVYIQHQDTTGVIGRVGRILGDNDINIATMQVGRKEKGGEAIMMLSFDRHLEDKIVKELTNVPDI 516 The following BLAST results are available for this feature:
BLAST of CX298307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX298307 ID=CX298307; Name=CX298307; organism=Citrus clementina; type=EST; length=776bpback to top |