CX298313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX298313 vs. ExPASy Swiss-Prot
Match: RL30_LUPLU (60S ribosomal protein L30 OS=Lupinus luteus GN=RPL30 PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.295e-46 Identity = 89/111 (80.18%), Postives = 97/111 (87.39%), Query Frame = -1 Query: 196 MVPSKKTKKTHESINNRLVFVMKSGKYTFGYKTVFRFFRSFKGKLIFLSNNCPPLRKSEIEYYAMLAKVGVPPSNGNNVDLGTACGKYFRVSCLSIIDPGDFDIIKSLPGE 528 MV +KKTKKTHESINNRL VMKSGKYT GYKTV + RS KGKLI ++NNCPPLRKSEIEYYAMLAKVGV NGNNVDLGTACGKY+RV CLSI+DPGD DIIK+LPG+ Sbjct: 1 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKTLPGD 111
BLAST of CX298313 vs. ExPASy Swiss-Prot
Match: RL30_EUPES (60S ribosomal protein L30 OS=Euphorbia esula GN=RPL30 PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 8.396e-46 Identity = 89/112 (79.46%), Postives = 96/112 (85.71%), Query Frame = -1 Query: 193 MVPSKKTKKTHESINNRLVFVMKSGKYTFGYKTVFRFFRSFKGKLIFLSNNCPPLRKSEIEYYAMLAKVGVPPSNGNNVDLGTACGKYFRVSCLSIIDPGDFDIIKSLPGEH 528 MV +KKTKKTHESIN+RL VMKSGK+T GYKTV RS KGKLI ++NNCPPLRKSEIEYYAMLAKVGV NGNNVDLGTACGKYFRV CLSIID GD DIIKS+PG+H Sbjct: 1 MVAAKKTKKTHESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDAGDSDIIKSIPGDH 112
BLAST of CX298313 vs. ExPASy Swiss-Prot
Match: RL302_ARATH (60S ribosomal protein L30-2 OS=Arabidopsis thaliana GN=RPL30B PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.068e-44 Identity = 85/111 (76.58%), Postives = 94/111 (84.68%), Query Frame = -1 Query: 196 MVPSKKTKKTHESINNRLVFVMKSGKYTFGYKTVFRFFRSFKGKLIFLSNNCPPLRKSEIEYYAMLAKVGVPPSNGNNVDLGTACGKYFRVSCLSIIDPGDFDIIKSLPGE 528 MV KKTKK+HE IN+RL VMKSGKYT GYK+V + R KGKLI +S NCPPLR+SEIEYYAMLAKVGV NGNNVDLGTACGKYFRVSCLSI+DPGD DIIKS+PG+ Sbjct: 1 MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGD 111
BLAST of CX298313 vs. ExPASy Swiss-Prot
Match: RL301_ARATH (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana GN=RPL30A PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.068e-44 Identity = 86/111 (77.48%), Postives = 96/111 (86.49%), Query Frame = -1 Query: 196 MVPSKKTKKTHESINNRLVFVMKSGKYTFGYKTVFRFFRSFKGKLIFLSNNCPPLRKSEIEYYAMLAKVGVPPSNGNNVDLGTACGKYFRVSCLSIIDPGDFDIIKSLPGE 528 MV +KKTKK+HE IN+RL VMKSGKYT GYK+V + RS KGKLI +S+NCPPLR+SEIEYYAMLAKVGV N NNVDLGTACGKYFRVSCLSI+DPGD DIIKSLPG+ Sbjct: 1 MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGD 111
BLAST of CX298313 vs. ExPASy Swiss-Prot
Match: RL303_ARATH (60S ribosomal protein L30-3 OS=Arabidopsis thaliana GN=RPL30C PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.701e-44 Identity = 85/111 (76.58%), Postives = 95/111 (85.59%), Query Frame = -1 Query: 196 MVPSKKTKKTHESINNRLVFVMKSGKYTFGYKTVFRFFRSFKGKLIFLSNNCPPLRKSEIEYYAMLAKVGVPPSNGNNVDLGTACGKYFRVSCLSIIDPGDFDIIKSLPGE 528 MV KK KK+HE IN+RL VMKSGKYT GYK+V + RS KGKLI +S+NCPPLR+SEIEYYAMLAKVGV NGNNVDLGTACGKYFRVSCLSI+DPGD DIIK+LPG+ Sbjct: 1 MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGD 111
BLAST of CX298313 vs. ExPASy Swiss-Prot
Match: RL30_MAIZE (60S ribosomal protein L30 OS=Zea mays GN=RPL30 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.255e-41 Identity = 82/111 (73.87%), Postives = 93/111 (83.78%), Query Frame = -1 Query: 196 MVPSKKTKKTHESINNRLVFVMKSGKYTFGYKTVFRFFRSFKGKLIFLSNNCPPLRKSEIEYYAMLAKVGVPPSNGNNVDLGTACGKYFRVSCLSIIDPGDFDIIKSLPGE 528 MV +KKTKK+ ++INN+L VMKSGKYT GYKTV R R+ K KL+ ++NNCPPLRKSEIEYYAMLAKV V +GNNVDLGTACGKYFRV CLSIIDPGD DIIK+ PGE Sbjct: 1 MVATKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEIEYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTPGE 111
BLAST of CX298313 vs. ExPASy Swiss-Prot
Match: RL30_ORYSJ (60S ribosomal protein L30 OS=Oryza sativa subsp. japonica GN=RPL30 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 5.271e-40 Identity = 80/107 (74.77%), Postives = 90/107 (84.11%), Query Frame = -1 Query: 208 MVPSKKTKKTHESINNRLVFVMKSGKYTFGYKTVFRFFRSFKGKLIFLSNNCPPLRKSEIEYYAMLAKVGVPPSNGNNVDLGTACGKYFRVSCLSIIDPGDFDIIKS 528 MV +KKTKK+ ++INN+L VMKSGKYT GYKTV R R+ K KL+ +SNNCPPLRKSEIEYYAMLAKV V +GNNVDLGTACGKYFRV CLSIIDPGD DIIK+ Sbjct: 1 MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEIEYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKT 107
BLAST of CX298313 vs. ExPASy Swiss-Prot
Match: RL30_WHEAT (60S ribosomal protein L30 OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 4.934e-38 Identity = 76/107 (71.03%), Postives = 87/107 (81.31%), Query Frame = -1 Query: 208 MVPSKKTKKTHESINNRLVFVMKSGKYTFGYKTVFRFFRSFKGKLIFLSNNCPPLRKSEIEYYAMLAKVGVPPSNGNNVDLGTACGKYFRVSCLSIIDPGDFDIIKS 528 M P+KK KK+ E+INN+L VMKSGKYT GYKTV + RS GKLI L+NNCPPLRKSEIE YAMLAK+ V +GNNVDLGTACGKY+RV CLSI+DPGD DII + Sbjct: 1 MAPTKKAKKSGENINNKLQLVMKSGKYTLGYKTVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDLGTACGKYYRVCCLSILDPGDSDIIST 107
BLAST of CX298313 vs. ExPASy Swiss-Prot
Match: RL30_RAT (60S ribosomal protein L30 OS=Rattus norvegicus GN=Rpl30 PE=3 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 2.707e-36 Identity = 73/109 (66.97%), Postives = 86/109 (78.90%), Query Frame = -1 Query: 202 MVPSKKTKKTHESINNRLVFVMKSGKYTFGYKTVFRFFRSFKGKLIFLSNNCPPLRKSEIEYYAMLAKVGVPPSNGNNVDLGTACGKYFRVSCLSIIDPGDFDIIKSLP 528 MV +KKTKK+ ESIN+RL VMKSGKY GYK + R K KL+ L+NNCP LRKSEIEYYAMLAK GV +GNN++LGTACGKY+RV L+IIDPGD DII+S+P Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of CX298313 vs. ExPASy Swiss-Prot
Match: RL30_OPHHA (60S ribosomal protein L30 OS=Ophiophagus hannah GN=RPL30 PE=3 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 2.707e-36 Identity = 73/109 (66.97%), Postives = 86/109 (78.90%), Query Frame = -1 Query: 202 MVPSKKTKKTHESINNRLVFVMKSGKYTFGYKTVFRFFRSFKGKLIFLSNNCPPLRKSEIEYYAMLAKVGVPPSNGNNVDLGTACGKYFRVSCLSIIDPGDFDIIKSLP 528 MV +KKTKK+ ESIN+RL VMKSGKY GYK + R K KL+ L+NNCP LRKSEIEYYAMLAK GV +GNN++LGTACGKY+RV L+IIDPGD DII+S+P Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109 The following BLAST results are available for this feature:
BLAST of CX298313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298313 ID=CX298313; Name=CX298313; organism=Citrus clementina; type=EST; length=621bpback to top |