CX298467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.618e-32 Identity = 63/76 (82.89%), Postives = 69/76 (90.79%), Query Frame = 3 Query: 12 QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 239 QSWGPLFGKLFF+IWVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWV++DPF S KA + GQCG+NC Sbjct: 1001 QSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDPFISPTQKAVALGQCGVNC 1076
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.618e-32 Identity = 63/76 (82.89%), Postives = 69/76 (90.79%), Query Frame = 3 Query: 12 QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 239 QSWGPLFGKLFF+IWVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWV++DPF S KA + GQCG+NC Sbjct: 1001 QSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDPFISPTQKAVALGQCGVNC 1076
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 4.406e-30 Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = 3 Query: 12 QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 239 QSWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV+VWS+LLASIFSLLWVR+DPFTS T + +CGINC Sbjct: 991 QSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDIL-ECGINC 1065
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.406e-30 Identity = 60/76 (78.95%), Postives = 68/76 (89.47%), Query Frame = 3 Query: 12 QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 239 QSWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV+VW+ILLASIFSLLWVR+DPFT+ T ++ +CGINC Sbjct: 999 QSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQ-KCGINC 1073
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.406e-30 Identity = 60/76 (78.95%), Postives = 68/76 (89.47%), Query Frame = 3 Query: 12 QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 239 QSWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV+VW+ILLASIFSLLWVR+DPFT+ T ++ +CGINC Sbjct: 999 QSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQ-KCGINC 1073
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.515e-30 Identity = 60/76 (78.95%), Postives = 67/76 (88.16%), Query Frame = 3 Query: 12 QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 239 QSWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV+VW+ILLASIFSLLWVR+DPFT+ T ++ CGINC Sbjct: 1007 QSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQ-TCGINC 1081
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.515e-30 Identity = 58/76 (76.32%), Postives = 65/76 (85.53%), Query Frame = 3 Query: 12 QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 239 QSWGPLFGKLFF+ WVI HLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVR+DPF TK +CGINC Sbjct: 952 QSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVL-KTKGPDTSKCGINC 1026
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.187e-29 Identity = 60/75 (80.00%), Postives = 68/75 (90.67%), Query Frame = 3 Query: 12 QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANS-NGQCGI 233 QSWGPLFGKLFFA+WVIAHLYPFLKGLLGRQNRTPTIVIVWS+LLASIFSLLWVR++PF + AN+ NG+ G+ Sbjct: 1006 QSWGPLFGKLFFALWVIAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVRINPFVDANPNANNFNGKGGV 1080
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.871e-29 Identity = 57/76 (75.00%), Postives = 65/76 (85.53%), Query Frame = 3 Query: 12 QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 239 ++WGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVR+DPFT + QCGINC Sbjct: 981 EAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFTI-KARGPDVRQCGINC 1055
BLAST of CX298467 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.871e-29 Identity = 57/76 (75.00%), Postives = 65/76 (85.53%), Query Frame = 3 Query: 12 QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 239 ++WGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVR+DPFT + QCGINC Sbjct: 981 EAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFTI-KARGPDVRQCGINC 1055 The following BLAST results are available for this feature:
BLAST of CX298467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298467 ID=CX298467; Name=CX298467; organism=Citrus clementina; type=EST; length=674bpback to top |