CX299058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299058 vs. ExPASy Swiss-Prot
Match: RL4A_SCHPO (60S ribosomal protein L4-A OS=Schizosaccharomyces pombe GN=rpl4a PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 8.088e-21 Identity = 52/96 (54.17%), Postives = 68/96 (70.83%), Query Frame = 2 Query: 2 RLEPDYLLPSNLVANADLTRLINSSEIQSVLKAPKGEARTKRVNVQKKNPLRNKQVMLRLNPYAAAYSKQKLGQQSVEGGKPTAPAESFLSTLYEN 289 +L+ +Y LP N+++NAD+TRLINS EIQS++KA G +R KR +VQKKNPL+NK V+ RLNPYA AY K + G P A E FL+ L+EN Sbjct: 272 QLKKNYFLPENIISNADVTRLINSDEIQSIVKAA-GPSRVKRAHVQKKNPLKNKAVLARLNPYAKAY---KANVKLNTGKTPKAAGEKFLTVLHEN 363
BLAST of CX299058 vs. ExPASy Swiss-Prot
Match: RL4B_SCHPO (60S ribosomal protein L4-B OS=Schizosaccharomyces pombe GN=rpl4b PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.802e-20 Identity = 52/97 (53.61%), Postives = 69/97 (71.13%), Query Frame = 2 Query: 2 RLEPDYLLPSNLVANADLTRLINSSEIQSVLKAPKGEARTKRVNVQKKNPLRNKQVMLRLNPYAAAY-SKQKLGQQSVEGGKPTAPAESFLSTLYEN 289 +L+ +Y LP N+++NAD+TRLINS EIQS++KA G +R KR +VQKKNPL+NK V+ RLNPYA AY + K+ + P A E FLS L+EN Sbjct: 272 QLKKNYFLPENIISNADVTRLINSDEIQSIVKAA-GPSRVKRAHVQKKNPLKNKAVLSRLNPYAKAYKANVKINSEKT----PKAAGEKFLSVLHEN 363
BLAST of CX299058 vs. ExPASy Swiss-Prot
Match: RL4B_YEAST (60S ribosomal protein L4-B OS=Saccharomyces cerevisiae GN=RPL4B PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 9.887e-19 Identity = 47/88 (53.41%), Postives = 64/88 (72.73%), Query Frame = 2 Query: 17 YLLPSNLVANADLTRLINSSEIQSVLKAPKGEARTKRVNVQKKNPLRNKQVMLRLNPYAAAYSKQKLGQQSVEGGKPTAPAESFLSTL 280 Y LPS++++ +D+TR+INSSEIQS ++ P G+A KR +V KKNPL+NKQV+LRLNPYA ++ +KLG + E T PA F TL Sbjct: 274 YTLPSHIISTSDVTRIINSSEIQSAIR-PAGQATQKRTHVLKKNPLKNKQVLLRLNPYAKVFAAEKLGSKKAE-KTGTKPAAVFAETL 359
BLAST of CX299058 vs. ExPASy Swiss-Prot
Match: RL4A_YEAST (60S ribosomal protein L4-A OS=Saccharomyces cerevisiae GN=RPL4A PE=1 SV=4) HSP 1 Score: 92.0485 bits (227), Expect = 9.887e-19 Identity = 47/88 (53.41%), Postives = 64/88 (72.73%), Query Frame = 2 Query: 17 YLLPSNLVANADLTRLINSSEIQSVLKAPKGEARTKRVNVQKKNPLRNKQVMLRLNPYAAAYSKQKLGQQSVEGGKPTAPAESFLSTL 280 Y LPS++++ +D+TR+INSSEIQS ++ P G+A KR +V KKNPL+NKQV+LRLNPYA ++ +KLG + E T PA F TL Sbjct: 274 YTLPSHIISTSDVTRIINSSEIQSAIR-PAGQATQKRTHVLKKNPLKNKQVLLRLNPYAKVFAAEKLGSKKAE-KTGTKPAAVFTETL 359
BLAST of CX299058 vs. ExPASy Swiss-Prot
Match: RL4B_XENLA (60S ribosomal protein L4-B (Fragment) OS=Xenopus laevis GN=rpl4-B PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.448e-11 Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 2 RLEPDYLLPSNLVANADLTRLINSSEIQSVLKAPKGEARTKRVNVQKKNPLRNKQVMLRLNPYAAAYSKQKLGQQ 226 +L+ DY LP + + N DLTR++ S EIQ L+AP + + + + KKNPL+N ++M+RLNPYA + + QQ Sbjct: 271 KLKADYNLPMHKMTNTDLTRILKSQEIQRALRAPNKKVKRREL---KKNPLKNLRIMMRLNPYAKTARRHAILQQ 342
BLAST of CX299058 vs. ExPASy Swiss-Prot
Match: RL4A_XENLA (60S ribosomal protein L4-A OS=Xenopus laevis GN=rpl4-A PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.448e-11 Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 2 RLEPDYLLPSNLVANADLTRLINSSEIQSVLKAPKGEARTKRVNVQKKNPLRNKQVMLRLNPYAAAYSKQKLGQQ 226 +L+ DY LP + + N DLTR++ S EIQ L+AP + + + + KKNPL+N ++M+RLNPYA + + QQ Sbjct: 276 KLKADYNLPMHKMTNTDLTRILKSQEIQRALRAPNKKVKRREL---KKNPLKNLRIMMRLNPYAKTARRHAILQQ 347 The following BLAST results are available for this feature:
BLAST of CX299058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299058 ID=CX299058; Name=CX299058; organism=Citrus clementina; type=EST; length=403bpback to top |