CX299808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299808 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.608e-40 Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 2 Query: 2 DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFTPK 235 DVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL AHLADPGHAT+FAAF+PK Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270
BLAST of CX299808 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.608e-40 Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 2 Query: 2 DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFTPK 235 DVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL AHLADPGHAT+FAAF+PK Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270
BLAST of CX299808 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.468e-15 Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 2 Query: 2 DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAA 223 D YPGG F+PLG+G + +KEL+ KEIKNGRLAMLA++G + Q + TG GP NL+ HLADP + V + Sbjct: 197 DPAYPGGPLFNPLGFGKDE-KSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTS 269
BLAST of CX299808 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.103e-14 Identity = 42/76 (55.26%), Postives = 51/76 (67.11%), Query Frame = 2 Query: 11 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQH-IYTGTGPIDNLIAHLADPGHATVFAAFTPK 235 YPGG FDPLG+ S P K +EL+ KEIKNGRLA+LA++G Q Y GTGP++NL HLADP H + PK Sbjct: 168 YPGGA-FDPLGY-SKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNIGDVIIPK 241
BLAST of CX299808 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.458e-14 Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 2 Query: 11 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAA 223 YPGG +F+PLG+G + +KEL+ KE+KNGRLAMLA++G + Q + TG GP NL+ H+ADP + V + Sbjct: 202 YPGGPFFNPLGFGKDE-KSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTS 271
BLAST of CX299808 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.340e-14 Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = 2 Query: 11 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQH-IYTGTGPIDNLIAHLADPGHATVFAAFTPK 235 YPGG FDPLG+ S P K +EL+ KEIKNGRLAMLA +G Q Y GTGP++NL HLADP H + P+ Sbjct: 167 YPGGA-FDPLGF-SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPR 240
BLAST of CX299808 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.081e-13 Identity = 40/73 (54.79%), Postives = 48/73 (65.75%), Query Frame = 2 Query: 11 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 229 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP+DNL+ HLADP + +A T Sbjct: 191 YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYAT 261
BLAST of CX299808 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.635e-13 Identity = 43/77 (55.84%), Postives = 47/77 (61.04%), Query Frame = 2 Query: 11 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAA---FTP 232 YPG FDPLG P+ EL+ KEIKNGRLAM + G + Q I TG GPI NL HLADPG FAA FTP Sbjct: 180 YPGES-FDPLGLAD-DPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254
BLAST of CX299808 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.635e-13 Identity = 41/77 (53.25%), Postives = 49/77 (63.64%), Query Frame = 2 Query: 11 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP--GHATVFAA-FTP 232 YPGG +FDPLG P EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HL DP +A VFA F P Sbjct: 191 YPGGQYFDPLGLAD-DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAP 266
BLAST of CX299808 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.054e-13 Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 2 Query: 2 DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 229 D+ YPGG FDPLG + PE EL+ KE+KNGRLAM ++ G + Q I TG GPI+NL HLADP + +A T Sbjct: 188 DLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFAT 261 The following BLAST results are available for this feature:
BLAST of CX299808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299808 ID=CX299808; Name=CX299808; organism=Citrus clementina; type=EST; length=399bpback to top |