CX299809
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299809 vs. ExPASy Swiss-Prot
Match: UEV1C_ARATH (Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana GN=UEV1C PE=1 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 7.521e-60 Identity = 103/112 (91.96%), Postives = 109/112 (97.32%), Query Frame = 1 Query: 1 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 336 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPP+VRFHSRINMTCVNH+TGVV+ KKFG+L NWQR+YTMEDILTQLKKEMAA HNRKLVQPPEGT+F Sbjct: 34 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLKKEMAASHNRKLVQPPEGTFF 145
BLAST of CX299809 vs. ExPASy Swiss-Prot
Match: UEV1D_ARATH (Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana GN=UEV1D PE=1 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 3.733e-59 Identity = 102/112 (91.07%), Postives = 106/112 (94.64%), Query Frame = 1 Query: 1 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 336 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPP+VRFHSR+NM CVNHETGVV+PKKFGLL NWQREYTMEDIL QLKKEM+ HNRKLVQPPEGT F Sbjct: 35 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLKKEMSTSHNRKLVQPPEGTCF 146
BLAST of CX299809 vs. ExPASy Swiss-Prot
Match: UEV1A_ARATH (Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana GN=UEV1A PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.377e-45 Identity = 81/109 (74.31%), Postives = 92/109 (84.40%), Query Frame = 1 Query: 1 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 327 SYGMDD DDIYM+SWTGTI+GP NT +EG+I+QLKLFC K+YPE PP+VRF +RINM CVN ETGVVEP F +L NW+REYTMEDIL +LKKEM HNRKL QPPEG Sbjct: 33 SYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKKEMMTSHNRKLAQPPEG 141
BLAST of CX299809 vs. ExPASy Swiss-Prot
Match: UEV1B_ARATH (Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana GN=UEV1B PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.871e-43 Identity = 78/109 (71.56%), Postives = 90/109 (82.57%), Query Frame = 1 Query: 1 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 327 SYGMDD DDI M+SWTGTI+GPHNT +EG+I+QLKLFC KDYPE PP+VRF SRINM CVN E GVV+P F +L NW+RE+TMED+L QLKKEM + NRKL QP EG Sbjct: 33 SYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMMSSQNRKLAQPLEG 141
BLAST of CX299809 vs. ExPASy Swiss-Prot
Match: UBE2V_DICDI (Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum GN=ube2v PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.209e-33 Identity = 61/112 (54.46%), Postives = 84/112 (75.00%), Query Frame = 1 Query: 1 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 336 SYG++ DDI + SW GTIIGP NT + R Y LKL+CDKDYP KPP+VRF ++IN+ CVN + GVV+PK +L NW + +++IL++L++EM++ N+KLVQPPEG F Sbjct: 27 SYGLESPDDILLSSWIGTIIGPQNTPFDNRFYSLKLYCDKDYPNKPPTVRFTTKINIGCVNQQNGVVDPKNLPILSNWTSKNRIQNILSELRREMSSSSNKKLVQPPEGANF 138
BLAST of CX299809 vs. ExPASy Swiss-Prot
Match: MMS2_SCHPO (Ubiquitin-conjugating enzyme spm2 OS=Schizosaccharomyces pombe GN=spm2 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 4.300e-31 Identity = 62/112 (55.36%), Postives = 79/112 (70.54%), Query Frame = 1 Query: 1 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 336 SYG+ + DDI + W TI+GP ++VHE RIY LK+ CD +YP+ PP V F SRIN+ V+ ETG V P K L +W+REY+ME +L LKKEMA+ NRKL QPPEG+ F Sbjct: 27 SYGLTNADDITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKVNPHKIDCLRHWKREYSMETVLLDLKKEMASSSNRKLPQPPEGSTF 138
BLAST of CX299809 vs. ExPASy Swiss-Prot
Match: MMS2_YEAST (Ubiquitin-conjugating enzyme variant MMS2 OS=Saccharomyces cerevisiae GN=MMS2 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 9.914e-28 Identity = 59/112 (52.68%), Postives = 74/112 (66.07%), Query Frame = 1 Query: 1 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 336 SYG+ D DDI M W GTI+GP ++ HE RIY L + C +YP+ PP V F S+IN+ CVN TG V+ F L +W+R YTME +L L+KEMA P N+KL QP EG F Sbjct: 27 SYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQ-TDFHTLRDWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 137
BLAST of CX299809 vs. ExPASy Swiss-Prot
Match: UB2V1_HUMAN (Ubiquitin-conjugating enzyme E2 variant 1 OS=Homo sapiens GN=UBE2V1 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 5.440e-26 Identity = 51/109 (46.79%), Postives = 73/109 (66.97%), Query Frame = 1 Query: 1 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 327 S+G++D +D+ + WTG IIGP T++E RIY LK+ C YPE PP VRF ++INM VN GVV+P+ +L WQ Y+++ +L +L++ M + N KL QPPEG Sbjct: 34 SWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 142
BLAST of CX299809 vs. ExPASy Swiss-Prot
Match: UB2V1_BOVIN (Ubiquitin-conjugating enzyme E2 variant 1 OS=Bos taurus GN=UBE2V1 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 5.440e-26 Identity = 51/109 (46.79%), Postives = 73/109 (66.97%), Query Frame = 1 Query: 1 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 327 S+G++D +D+ + WTG IIGP T++E RIY LK+ C YPE PP VRF ++INM VN GVV+P+ +L WQ Y+++ +L +L++ M + N KL QPPEG Sbjct: 34 SWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 142
BLAST of CX299809 vs. ExPASy Swiss-Prot
Match: UB2V1_MOUSE (Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus GN=Ube2v1 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 9.279e-26 Identity = 51/109 (46.79%), Postives = 75/109 (68.81%), Query Frame = 1 Query: 1 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 327 S+G++D +D+ + WTG IIGP T++E RIY LK+ C YPE PPSVRF +R+NM+ V+ GVV+P+ +L WQ ++++ IL +L++ M + N KL QPPEG Sbjct: 34 SWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPSVRFVTRVNMSGVSSSNGVVDPRATAVLAKWQNSHSIKVILQELRRLMMSKENMKLPQPPEG 142 The following BLAST results are available for this feature:
BLAST of CX299809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299809 ID=CX299809; Name=CX299809; organism=Citrus clementina; type=EST; length=438bpback to top |