CX299811
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299811 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.121e-25 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 3 Query: 3 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 161 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
BLAST of CX299811 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.121e-25 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 3 Query: 3 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 161 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
BLAST of CX299811 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.121e-25 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 3 Query: 3 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 161 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
BLAST of CX299811 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 4.121e-25 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 3 Query: 3 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 161 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 209 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 261
BLAST of CX299811 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 4.121e-25 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 3 Query: 3 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 161 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
BLAST of CX299811 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.029e-25 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 3 Query: 3 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 161 EIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK Sbjct: 222 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
BLAST of CX299811 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.029e-25 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 3 Query: 3 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 161 EIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK Sbjct: 226 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
BLAST of CX299811 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.029e-25 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 3 Query: 3 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 161 EIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK Sbjct: 226 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
BLAST of CX299811 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.029e-25 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 3 Query: 3 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 161 E+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 213 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
BLAST of CX299811 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.029e-25 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 3 Query: 3 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 161 E+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 154 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 206 The following BLAST results are available for this feature:
BLAST of CX299811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299811 ID=CX299811; Name=CX299811; organism=Citrus clementina; type=EST; length=300bpback to top |