CX299861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299861 vs. ExPASy Swiss-Prot
Match: RS241_ARATH (40S ribosomal protein S24-1 OS=Arabidopsis thaliana GN=RPS24A PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 1.997e-60 Identity = 113/122 (92.62%), Postives = 122/122 (100.00%), Query Frame = 3 Query: 63 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKADLKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGV 428 MA+KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKA+LKEKLARMY+VKDPN+IFVFKFRTHFGGGKS+GFGLIYD+V+SAKKFEPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKIRGV Sbjct: 1 MAEKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSSGFGLIYDTVESAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIRGV 122
BLAST of CX299861 vs. ExPASy Swiss-Prot
Match: RS242_ARATH (40S ribosomal protein S24-2 OS=Arabidopsis thaliana GN=RPS24B PE=2 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 3.189e-58 Identity = 108/122 (88.52%), Postives = 120/122 (98.36%), Query Frame = 3 Query: 63 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKADLKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGV 428 MA+KAVTIRTR FMTNRLL+RKQFVIDVLHPGRANVSKA+LKEKLARMY+VKDPN+IF FKFRTHFGGGKS+G+GLIYD+V++AKKFEPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKIRGV Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCFKFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIRGV 122
BLAST of CX299861 vs. ExPASy Swiss-Prot
Match: RS24_RAT (40S ribosomal protein S24 OS=Rattus norvegicus GN=Rps24 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.346e-40 Identity = 83/116 (71.55%), Postives = 96/116 (82.76%), Query Frame = 3 Query: 78 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKADLKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRG 425 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K +++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119
BLAST of CX299861 vs. ExPASy Swiss-Prot
Match: RS24_PONAB (40S ribosomal protein S24 OS=Pongo abelii GN=RPS24 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.346e-40 Identity = 83/116 (71.55%), Postives = 96/116 (82.76%), Query Frame = 3 Query: 78 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKADLKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRG 425 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K +++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119
BLAST of CX299861 vs. ExPASy Swiss-Prot
Match: RS24_MOUSE (40S ribosomal protein S24 OS=Mus musculus GN=Rps24 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.346e-40 Identity = 83/116 (71.55%), Postives = 96/116 (82.76%), Query Frame = 3 Query: 78 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKADLKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRG 425 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K +++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119
BLAST of CX299861 vs. ExPASy Swiss-Prot
Match: RS24_MESAU (40S ribosomal protein S24 OS=Mesocricetus auratus GN=RPS24 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.346e-40 Identity = 83/116 (71.55%), Postives = 96/116 (82.76%), Query Frame = 3 Query: 78 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKADLKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRG 425 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K +++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119
BLAST of CX299861 vs. ExPASy Swiss-Prot
Match: RS24_HUMAN (40S ribosomal protein S24 OS=Homo sapiens GN=RPS24 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.346e-40 Identity = 83/116 (71.55%), Postives = 96/116 (82.76%), Query Frame = 3 Query: 78 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKADLKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRG 425 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K +++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119
BLAST of CX299861 vs. ExPASy Swiss-Prot
Match: RS24_BOVIN (40S ribosomal protein S24 OS=Bos taurus GN=RPS24 PE=2 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 1.346e-40 Identity = 83/116 (71.55%), Postives = 96/116 (82.76%), Query Frame = 3 Query: 78 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKADLKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRG 425 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K +++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119
BLAST of CX299861 vs. ExPASy Swiss-Prot
Match: RS24_XENLA (40S ribosomal protein S24 OS=Xenopus laevis GN=rps24 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.999e-40 Identity = 82/116 (70.69%), Postives = 96/116 (82.76%), Query Frame = 3 Query: 78 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKADLKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRG 425 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K +++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D AKK EPK+RL ++GL K + SRKQ KERKNR KK+RG Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLAKHGLYEKKKTSRKQRKERKNRMKKVRG 119
BLAST of CX299861 vs. ExPASy Swiss-Prot
Match: RS24_MACFA (40S ribosomal protein S24 OS=Macaca fascicularis GN=RPS24 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 8.725e-40 Identity = 82/116 (70.69%), Postives = 95/116 (81.90%), Query Frame = 3 Query: 78 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKADLKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRG 425 VTIRTRKFMTNRLL RKQ VI VLHPG+A V K +++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIGVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119 The following BLAST results are available for this feature:
BLAST of CX299861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299861 ID=CX299861; Name=CX299861; organism=Citrus clementina; type=EST; length=543bpback to top |