CX299869
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299869 vs. ExPASy Swiss-Prot
Match: TDT_ARATH (Tonoplast dicarboxylate transporter OS=Arabidopsis thaliana GN=TDT PE=2 SV=2) HSP 1 Score: 275.404 bits (703), Expect = 9.556e-74 Identity = 137/163 (84.05%), Postives = 149/163 (91.41%), Query Frame = 1 Query: 1 FNDRAGDGTASVVMATLLFIIPSMKQKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTG 489 F RAGDGT SV+MATLLFIIPS +KGEKLMDWNKCKKLPWNI+LLLGAGFAIADGVRTSGLA+ LSK L FLE APY AIAP VCLI+A ITEFTSNNATTTL++PLLI+IAK M +HPLLLMVPGAIGAQF+FLLPTGTPSN+VGFTTGHIEI+DMIKTG Sbjct: 349 FAGRAGDGTVSVMMATLLFIIPSNIKKGEKLMDWNKCKKLPWNIVLLLGAGFAIADGVRTSGLAEVLSKGLVFLETAPYWAIAPTVCLIAATITEFTSNNATTTLLVPLLIEIAKNMGIHPLLLMVPGAIGAQFAFLLPTGTPSNVVGFTTGHIEIKDMIKTG 511
BLAST of CX299869 vs. ExPASy Swiss-Prot
Match: SDCS_STAS1 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sdcS PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 7.402e-34 Identity = 67/164 (40.85%), Postives = 103/164 (62.80%), Query Frame = 1 Query: 1 FNDRAGDGTASVVMATLLFIIPSM-KQKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTG 489 F DGT ++ ++ LLF+IP+ K+K ++++DW K LPW +++L G G A+A G+ SGLA+ L + L +E L I ++ + +TE TSN AT T++LP+L ++ ++VHPLLLMVP A+ A +++LP GTP N + F TG I I+ M G Sbjct: 322 FTSEVADGTIAMFISVLLFLIPAKNKEKHKRIIDWEVAKDLPWGVLILFGGGLALAKGISESGLANWLGEQLKLIEGVSPLVIVLVITIFVLFLTEITSNTATATMILPILATLSVAVNVHPLLLMVPAAMAANCAYMLPVGTPPNAIVFGTGKISIKKMASVG 485
BLAST of CX299869 vs. ExPASy Swiss-Prot
Match: S13A3_MOUSE (Solute carrier family 13 member 3 OS=Mus musculus GN=Slc13a3 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 3.674e-33 Identity = 70/171 (40.94%), Postives = 101/171 (59.06%), Query Frame = 1 Query: 19 DGTASVVMATLLFIIPSMK-------------QKGEKLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTG 489 D V + T+LF PS K + E L+ W K ++ +PWNIILLLG GFA+A G SGL+ + L LE P L ++ ++ A TEF SN AT + LP+L ++A +HVHPL LM+PG +G ++F+LP TP N + F+TGH+ ++DM++TG Sbjct: 376 DAVTGVAIVTILFFFPSQKPSLKWWFDFKAPNSETEPLLSWKKAQETVPWNIILLLGGGFAMAKGCEESGLSAWIGGQLHPLEHVPPLLAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLHVHPLYLMIPGTVGCSYAFMLPVSTPPNSIAFSTGHLLVKDMVRTG 546
BLAST of CX299869 vs. ExPASy Swiss-Prot
Match: S13A5_HUMAN (Solute carrier family 13 member 5 OS=Homo sapiens GN=SLC13A5 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 8.184e-33 Identity = 73/174 (41.95%), Postives = 107/174 (61.49%), Query Frame = 1 Query: 19 DGTASVVMATLLFIIPSMKQKGE----------------KLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTG 489 D T ++ +ATLLFI+PS K K L+DW + K+PW I+LLLG GFA+A G SGL+ + K ++ L A P AI I+ L+ A+ TE TSN ATTTL LP+ +++++ ++PL +M+P + A F+F+LP TP N + FT GH+++ DM+KTG Sbjct: 356 DATVAIFVATLLFIVPSQKPKFNFRSQTEEERKTPFYPPPLLDWKVTQEKVPWGIVLLLGGGFALAKGSEASGLSVWMGKQMEPLHAVPPAAITLILSLLVAVFTECTSNVATTTLFLPIFASMSRSIGLNPLYIMLPCTLSASFAFMLPVATPPNAIVFTYGHLKVADMVKTG 529
BLAST of CX299869 vs. ExPASy Swiss-Prot
Match: S13A3_RAT (Solute carrier family 13 member 3 OS=Rattus norvegicus GN=Slc13a3 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.823e-32 Identity = 69/171 (40.35%), Postives = 100/171 (58.48%), Query Frame = 1 Query: 19 DGTASVVMATLLFIIPSMK-------------QKGEKLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTG 489 D V + T+LF PS K + E L+ W K ++ +PWNIILLLG GFA+A G SGL+ + L LE P L ++ ++ A TEF SN AT + LP+L ++A +HVHPL LM+PG + ++F+LP TP N + F+TGH+ ++DM++TG Sbjct: 376 DAVTGVAIVTILFFFPSQKPSLKWWFDFKAPNSETEPLLSWKKAQETVPWNIILLLGGGFAMAKGCEESGLSAWIGGQLHPLEHVPPLLAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLHVHPLYLMIPGTVSCSYAFMLPVSTPPNSIAFSTGHLLVKDMVRTG 546
BLAST of CX299869 vs. ExPASy Swiss-Prot
Match: S13A3_HUMAN (Solute carrier family 13 member 3 OS=Homo sapiens GN=SLC13A3 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.000e-30 Identity = 67/171 (39.18%), Postives = 98/171 (57.31%), Query Frame = 1 Query: 19 DGTASVVMATLLFIIPSMKQ-------------KGEKLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTG 489 D V + T+LF PS + + E L+ W K ++ +PWNIILLLG GFA+A G SGL+ + L LE P ++ ++ A TEF SN AT + LP+L ++A + VHPL LM+PG +G F+F+LP TP N + F +GH+ ++DM++TG Sbjct: 378 DAVTGVAIVTILFFFPSQRPSLKWWFDFKAPNTETEPLLTWKKAQETVPWNIILLLGGGFAMAKGCEESGLSVWIGGQLHPLENVPPALAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLRVHPLYLMIPGTVGCSFAFMLPVSTPPNSIAFASGHLLVKDMVRTG 548
BLAST of CX299869 vs. ExPASy Swiss-Prot
Match: SDCS_STAAR (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MRSA252) GN=sdcS PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.706e-30 Identity = 63/158 (39.87%), Postives = 97/158 (61.39%), Query Frame = 1 Query: 19 DGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTG 489 DGT ++ ++ LLFIIP+ +K +++DW K+LPW +++L G G A+A G+ SGLA L + L L + I ++ + +TE TSN AT T++LP+L ++ + VHPLLLM P A+ A +++LP GTP N + F +G I I+ M G Sbjct: 329 DGTIAIFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVG 486
BLAST of CX299869 vs. ExPASy Swiss-Prot
Match: SDCS_STAAN (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain N315) GN=sdcS PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.706e-30 Identity = 63/158 (39.87%), Postives = 97/158 (61.39%), Query Frame = 1 Query: 19 DGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTG 489 DGT ++ ++ LLFIIP+ +K +++DW K+LPW +++L G G A+A G+ SGLA L + L L + I ++ + +TE TSN AT T++LP+L ++ + VHPLLLM P A+ A +++LP GTP N + F +G I I+ M G Sbjct: 329 DGTIAIFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVG 486
BLAST of CX299869 vs. ExPASy Swiss-Prot
Match: SDCS_STAAM (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sdcS PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.706e-30 Identity = 63/158 (39.87%), Postives = 97/158 (61.39%), Query Frame = 1 Query: 19 DGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTG 489 DGT ++ ++ LLFIIP+ +K +++DW K+LPW +++L G G A+A G+ SGLA L + L L + I ++ + +TE TSN AT T++LP+L ++ + VHPLLLM P A+ A +++LP GTP N + F +G I I+ M G Sbjct: 329 DGTIAIFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVG 486
BLAST of CX299869 vs. ExPASy Swiss-Prot
Match: SDCS_STAAC (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain COL) GN=sdcS PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.706e-30 Identity = 63/158 (39.87%), Postives = 97/158 (61.39%), Query Frame = 1 Query: 19 DGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTG 489 DGT ++ ++ LLFIIP+ +K +++DW K+LPW +++L G G A+A G+ SGLA L + L L + I ++ + +TE TSN AT T++LP+L ++ + VHPLLLM P A+ A +++LP GTP N + F +G I I+ M G Sbjct: 329 DGTIAIFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVG 486 The following BLAST results are available for this feature:
BLAST of CX299869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299869 ID=CX299869; Name=CX299869; organism=Citrus clementina; type=EST; length=489bpback to top |