CX299872
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299872 vs. ExPASy Swiss-Prot
Match: RR17_ARATH (30S ribosomal protein S17, chloroplastic OS=Arabidopsis thaliana GN=RPS17 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.587e-29 Identity = 66/100 (66.00%), Postives = 75/100 (75.00%), Query Frame = 1 Query: 121 FLNGSTPLTRLSKPTSTPQNLPYASFPQIKAMKKMQGRVVCASSDKTVAVEVVRLDPHPXXXXXXXXXXXXQAHDPENQFQVGDLVQLEKSRPISKTKSF 420 F +GSTPL+ LSKP S P + A P I+AMK MQGRVVCA+SDKTVAVEVVRL PHP QAHDP+NQF+VGD+V+LEKSRPISKTKSF Sbjct: 19 FAHGSTPLSSLSKPNSFPNHRMPALVPVIRAMKTMQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKSRPISKTKSF 118
BLAST of CX299872 vs. ExPASy Swiss-Prot
Match: RR17_PEA (30S ribosomal protein S17, chloroplastic (Fragment) OS=Pisum sativum GN=RPS17 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.439e-22 Identity = 56/103 (54.37%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 121 FLNGSTPLTRLSKPTSTPQNLPYAS---FPQIKAMKKMQGRVVCASSDKTVAVEVVRLDPHPXXXXXXXXXXXXQAHDPENQFQVGDLVQLEKSRPISKTKSF 420 F L R S P S+PQ FP IKAMK M+G+VVCAS +KTVAVEV RL PHP QAHDPEN F+VGD+VQL K+RPISK K+F Sbjct: 4 FTGNGIGLNRFSNPISSPQTQTQTRSLPFPAIKAMKTMEGKVVCASGNKTVAVEVTRLAPHPKYQKRIRLKKKYQAHDPENDFKVGDIVQLLKTRPISKKKTF 106
BLAST of CX299872 vs. ExPASy Swiss-Prot
Match: RR17_ORYSJ (30S ribosomal protein S17, chloroplastic OS=Oryza sativa subsp. japonica GN=RPS17 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.296e-17 Identity = 42/73 (57.53%), Postives = 52/73 (71.23%), Query Frame = 1 Query: 202 QIKAMKKMQGRVVCASSDKTVAVEVVRLDPHPXXXXXXXXXXXXQAHDPENQFQVGDLVQLEKSRPISKTKSF 420 +I+A K++ GRVV +DKTV VEVVRL PHP QAHDP+NQF+VGD+V+L +SRPISKTK F Sbjct: 33 RIQAAKQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAHDPDNQFKVGDVVELRRSRPISKTKHF 105
BLAST of CX299872 vs. ExPASy Swiss-Prot
Match: RR17_MAIZE (30S ribosomal protein S17, chloroplastic OS=Zea mays GN=RPS17 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.917e-17 Identity = 45/96 (46.88%), Postives = 59/96 (61.46%), Query Frame = 1 Query: 133 STPLTRLSKPTSTPQNLPYASFPQIKAMKKMQGRVVCASSDKTVAVEVVRLDPHPXXXXXXXXXXXXQAHDPENQFQVGDLVQLEKSRPISKTKSF 420 S+P +S P + +I+A +++ GRVV +DKTV VEVVRL PHP QAHDP+NQF+VGD+V+L+ SRPISKTK F Sbjct: 5 SSPFVSVSPPPPPLSSHGARPALRIEAARQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAHDPDNQFKVGDVVELQPSRPISKTKHF 100 The following BLAST results are available for this feature:
BLAST of CX299872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299872 ID=CX299872; Name=CX299872; organism=Citrus clementina; type=EST; length=422bpback to top |