CX299876

Overview
NameCX299876
Unique NameCX299876
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length556
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig860 contig Ccv1_Contig860:117..672. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX299876 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.325e-29
Identity = 68/173 (39.31%), Postives = 104/173 (60.12%), Query Frame = 3
Query:   24 PLLDVNGNKVQSTLKYYIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYNNST-IVRESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGR-SFEDGVRRLVL 533
            P+LD +G+++Q+ ++YY++S+I                 CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YK   CPSVC+SC   C+++GR S +DG  RL L
Sbjct:   30 PVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVL--GYKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
BLAST of CX299876 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 2.881e-25
Identity = 66/184 (35.87%), Postives = 99/184 (53.80%), Query Frame = 3
Query:   12 SVPEPLLDVNGNKVQSTLKYYIVSAI--WXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSFED-GVRRLVLVRDDEP 551
            S P P+LD++G K+++   YYIV  +                   CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK+V CP+VC SC   C +VG   +  G RRL L   D+P
Sbjct:   31 SAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLAL--SDKP 209          
BLAST of CX299876 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.523e-21
Identity = 65/179 (36.31%), Postives = 94/179 (52.51%), Query Frame = 3
Query:   18 PEPLLDVNGNKVQSTLKYYIVSAIW-XXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYNN--STIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSFED-GVRRLVLVRD 542
            P+P++D++G  V   + Y++VSAIW                 CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K G  P +YK   CPS   + +  CNNV   F+   +RRL+L  D
Sbjct:    3 PKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG-LPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173          
BLAST of CX299876 vs. ExPASy Swiss-Prot
Match: SPORB_IPOBA (Sporamin B OS=Ipomoea batatas GN=GSPO-B1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.314e-13
Identity = 56/185 (30.27%), Postives = 86/185 (46.49%), Query Frame = 3
Query:    6 TSSVPEPLLDVNGNKVQSTLKYYIVSAIW--XXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSFEDGVRRLVLVRDDEP 551
            T+S   P+LD+NG++V++   YYIVSAIW                  C  DVI   SD  NG  +T++P +  +T+V  ST    RF++  +    C     W +  +D+ SG++F+  G            N FK+E + +    YKI    S C+   + C NVGR ++   R   L   + P
Sbjct:   34 TASSETPVLDINGDEVRAGENYYIVSAIWGAGGGGLRLVRLDSSSNECASDVIVSRSDFDNGDPITITPADPEATVVMPSTYQTFRFNI--ATNKLCVNNVNWGI-KHDSESGQYFVKAGEF-----VSDNSNQFKIEVVNDNLNAYKI----SYCQFGTEKCFNVGRYYDPLTRATRLALSNTP 206          
BLAST of CX299876 vs. ExPASy Swiss-Prot
Match: SPOR1_IPOBA (Sporamin A OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.359e-13
Identity = 54/185 (29.19%), Postives = 86/185 (46.49%), Query Frame = 3
Query:    9 SSVPEPLLDVNGNKVQSTLKYYIVSAIW-XXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN---NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSFEDGVRRLVLVRDDEP 551
            +S   P+LD+NG++V++   YY+VSAIW                 C  DVI  P+D+ NG  +T++P      ST+V  ST    RF++  +    C     W +  +D+ASG++F+  G            N FK+E +     +YK+ +C    + C     NVGR  +  +R   L   + P
Sbjct:   37 ASSETPVLDINGDEVRAGGNYYMVSAIWGAGGGGLRLAHLDMMSKCATDVIVSPNDLDNGDPITITPATADPESTVVMASTYQTFRFNI--ATNKLCVNNVNWGI-QHDSASGQYFLKAGEF-----VSDNSNQFKIELVDANLNSYKLTYCQFGSDKCY----NVGRFHDHMLRTTRLALSNSP 209          
BLAST of CX299876 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.612e-13
Identity = 54/177 (30.51%), Postives = 84/177 (47.46%), Query Frame = 3
Query:   21 EPLLDVNGNKVQSTLKYYIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLS-PYNNSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSFEDGVRRLVLVRDDE 548
            E + D+ G  V    +YYIVSAI                 CP+ +IQ  SD+Q G+ +  S P  +   +   T+L + F      +  C E   W +      SG+  +  GG + HP  E +  +FK+EK+G+    YK+V CP   +S    C+++G ++E G R LVL   D+
Sbjct:    4 EKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEFVE----KPDCAESSKWVIVK---DSGEARVAIGGSEDHPQGELVRGFFKIEKLGSL--AYKLVFCP---KSSSGSCSDIGINYE-GRRSLVLKSSDD 167          
BLAST of CX299876 vs. ExPASy Swiss-Prot
Match: SPOR2_IPOBA (Sporamin B OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.639e-12
Identity = 55/185 (29.73%), Postives = 86/185 (46.49%), Query Frame = 3
Query:    6 TSSVPEPLLDVNGNKVQSTLKYYIVSAIW--XXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSFEDGVRRLVLVRDDEP 551
            T+S   P+LD+NG++V++   YY+VSAIW                  C  DVI   SD  NG  +T++P +  +T+V  ST    RF++  +    C     W +  +D+ SG++F+  G            N FK+E + +    YKI    S C+   + C NVGR ++   R   L   + P
Sbjct:   34 TASSETPVLDINGDEVRAGENYYMVSAIWGAGGGGLRLVRLDSSSNECASDVIVSRSDFDNGDPITITPADPEATVVMPSTYQTFRFNI--ATNKLCVNNVNWGI-KHDSESGQYFVKAGEF-----VSDNSNQFKIEVVNDNLNAYKI----SYCQFGTEKCFNVGRYYDPLTRATRLALSNIP 206          
The following BLAST results are available for this feature:
BLAST of CX299876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ASP_THECC7.325e-2939.3121 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU2.881e-2535.87Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA2.523e-2136.31Latex serine proteinase inhibitor OS=Carica papaya... [more]
SPORB_IPOBA4.314e-1330.27Sporamin B OS=Ipomoea batatas GN=GSPO-B1 PE=2 SV=1[more]
SPOR1_IPOBA7.359e-1329.19Sporamin A OS=Ipomoea batatas PE=2 SV=1[more]
DRTI_DELRE9.612e-1330.51Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
SPOR2_IPOBA1.639e-1229.73Sporamin B OS=Ipomoea batatas PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionC07003E05SK NTLeaf1 Citrus clementina cDNA clone C07003E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299876 ID=CX299876; Name=CX299876; organism=Citrus clementina; type=EST; length=556bp
TGGGCACCTCATCAGTTCCTGAACCTCTCCTTGATGTCAACGGCAACAAG
GTCCAATCCACCCTTAAGTACTACATAGTCTCAGCCATCTGGGGAGCTGG
CGGTGGTGGAGTTAGCCTACACGGTGGCAGAAACGGATATTGTCCGCTGG
ACGTTATCCAATTACCTTCTGATATGCAAAATGGAATCGAATTAACACTG
TCACCGTATAACAATTCTACAATTGTCCGAGAATCCACTGATCTCAACTT
GAGATTCTCAGTGTTGCTATCTGGACGTGACTATTGTAACGAACAACCGT
TGTGGAAAGTTGATAATTATGACGCTGCATCAGGCAAATGGTTTATAACA
ACCGGGGGACTTGATGGTCATCCTGGAGCTGAAACTTTGCTAAATTGGTT
TAAGCTTGAGAAAATTGGAAATTTTCCAGGTACATACAAAATCGTTCATT
GTCCATCCGTTTGCGAGTCTTGTGTCAAACACTGCAACAACGTTGGCCGT
TCGTTTGAGGATGGCGTTCGACGTCTGGTTCTGGTTCGTGATGATGAGCC
GGCATT
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