CX300055

Overview
NameCX300055
Unique NameCX300055
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length546
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX300055 vs. ExPASy Swiss-Prot
Match: CP12_CHLRE (Calvin cycle protein CP12 OS=Chlamydomonas reinhardtii GN=cp12 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.797e-14
Identity = 37/74 (50.00%), Postives = 50/74 (67.57%), Query Frame = 1 
Query:  187 ISEKVEQSIKSAXEACEGDPASGECAAAWDEVEELSAAASHARERKKD----SDPLEAYCKDNPETDECRTYXD 396
            +++KV+ ++K A +AC     S +CA AWD VEELSAA SH ++  K     +DPLEA+CKD P+ DECR Y D
Sbjct:    8 LNKKVQDAVKEAEDAC-AKGTSADCAVAWDTVEELSAAVSHKKDAVKADVTLTDPLEAFCKDAPDADECRVYED 80
The following BLAST results are available for this feature:
BLAST of CX300055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CP12_CHLRE3.797e-1450.00Calvin cycle protein CP12 OS=Chlamydomonas reinhar... [more]
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Properties
Property NameValue
Genbank descriptionC07005E09SK SaltLeaf1 Citrus clementina cDNA clone C07005E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300055 ID=CX300055; Name=CX300055; organism=Citrus clementina; type=EST; length=546bp
GCGAGAATGGCAACAATAGCCGGTGTCAATCTCTCAACTCCCAGCGTCTT
TGCCAAAATCACAGACCCGAAGTCAAAGGTTCAACCCAGCAGGTCTCTGT
GGCTCAACAACCCATCAAGGAAAAGGCCCGCTCAGTTTAGAACAGGGCGC
ATGCACATGCAACCCCTGAGAGCTGCTCCCGATAGAATCTCAGAGAAGGT
GGAGCAAAGCATCAAGAGTGCANAGGAGGCGTGCGAGGGGGACCCTGCTA
GTGGCGAGTGTGCTGCTGCATGGGACGAGGTGGAGGAGCTGAGTGCCGCG
GCCAGCCATGCTAGAGAGAGGAAGAAGGATTCCGATCCTTTGGAGGCTTA
CTGTAAGGACAACCCAGAGACCGATGAGTGCCGCACTTATNAAGATTGAT
AACATCGTCGTTATGCTCTTTTAATTATGTTTTTTTTTTCTCCTTTTTAA
GTCCTTGGATGTTGTTATGTGATGGGATCGTGATGTTTTGGTCACCTTGA
TATTCATATACTACAATACCATATGGAGACTTGAATGATAAATAGT
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