CX300136

Overview
NameCX300136
Unique NameCX300136
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length462
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13369 contig Ccv1_Contig13369:482..943. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL2_ARATH (rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana GN=FIB2 PE=1 SV=2)

HSP 1 Score: 291.582 bits (745), Expect = 1.082e-78
Identity = 144/153 (94.12%), Postives = 149/153 (97.39%), Query Frame = 2 
Query:    2 NIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            NIWIKPG +VLYLGAASGTTVSHVSD+VGP G VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLK+GGHFVISIKANCIDSTVPAEAVFQ+EVKKLQQ+QFKP EQVTLEPFERDH
Sbjct:  149 NIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEPFERDH 301
[Close]
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL1_ARATH (rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana GN=FIB1 PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 1.563e-77
Identity = 143/153 (93.46%), Postives = 147/153 (96.08%), Query Frame = 2 
Query:    2 NIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            NIWIKPG +VLYLGAASGTTVSHVSD+VGP G VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS+FLK GGHFVISIKANCIDSTV AEAVFQSEVKKLQQ+QFKP EQVTLEPFERDH
Sbjct:  138 NIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASFFLKTGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDH 290
[Close]
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_RAT (rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus GN=Fbl PE=1 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 2.500e-67
Identity = 123/152 (80.92%), Postives = 138/152 (90.79%), Query Frame = 2 
Query:    5 IWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            I IKPG +VLYLGAASGTTVSHVSDIVGP+G+VYAVEFSHRSGRDL+N+AKKRTN+IP+IEDARHP KYRML+ MVDVIF+DVAQPDQ RI+ALNA  FL+ GGHFVISIKANCIDST  AEAVF SEVKK+QQ+  KP EQ+TLEP+ERDH
Sbjct:  161 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDH 312
[Close]
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_MOUSE (rRNA 2'-O-methyltransferase fibrillarin OS=Mus musculus GN=Fbl PE=1 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 2.500e-67
Identity = 123/152 (80.92%), Postives = 138/152 (90.79%), Query Frame = 2 
Query:    5 IWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            I IKPG +VLYLGAASGTTVSHVSDIVGP+G+VYAVEFSHRSGRDL+N+AKKRTN+IP+IEDARHP KYRML+ MVDVIF+DVAQPDQ RI+ALNA  FL+ GGHFVISIKANCIDST  AEAVF SEVKK+QQ+  KP EQ+TLEP+ERDH
Sbjct:  161 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDH 312
[Close]
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_HUMAN (rRNA 2'-O-methyltransferase fibrillarin OS=Homo sapiens GN=FBL PE=1 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 2.500e-67
Identity = 123/152 (80.92%), Postives = 138/152 (90.79%), Query Frame = 2 
Query:    5 IWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            I IKPG +VLYLGAASGTTVSHVSDIVGP+G+VYAVEFSHRSGRDL+N+AKKRTN+IP+IEDARHP KYRML+ MVDVIF+DVAQPDQ RI+ALNA  FL+ GGHFVISIKANCIDST  AEAVF SEVKK+QQ+  KP EQ+TLEP+ERDH
Sbjct:  155 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDH 306
[Close]
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_XENLA (rRNA 2'-O-methyltransferase fibrillarin OS=Xenopus laevis GN=fbl PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 4.265e-67
Identity = 122/152 (80.26%), Postives = 138/152 (90.79%), Query Frame = 2 
Query:    5 IWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            I IKPGV+VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRSGRDL+N+AKKRTN+IP+IEDARHP KYR+LVGMVDV+F+DVAQPDQ RI+ALNA  FLK GGHFVISIKANCIDST   EAVF +EVKK+QQ+  KP EQ+TLEP+ERDH
Sbjct:  157 IHIKPGVKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPVIEDARHPHKYRILVGMVDVVFADVAQPDQTRIVALNAHNFLKNGGHFVISIKANCIDSTAAPEAVFAAEVKKMQQENMKPQEQLTLEPYERDH 308
[Close]
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBLL1_MOUSE (rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS=Mus musculus GN=Fbll1 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 6.159e-66
Identity = 120/152 (78.95%), Postives = 139/152 (91.45%), Query Frame = 2 
Query:    5 IWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            I IKP  +VLYLGAASGTTVSHVSDI+GP+G+VYAVEFSHR+GRDLVN+AKKRTN+IP++EDARHP KYRML+GMVDVIF+DVAQPDQ+RI+ALNA  FL+ GGHF+ISIKANCIDST  AEAVF SEV+KLQQ+  KP EQ+TLEP+ERDH
Sbjct:  149 IHIKPKSKVLYLGAASGTTVSHVSDIIGPDGLVYAVEFSHRAGRDLVNVAKKRTNIIPVLEDARHPLKYRMLIGMVDVIFADVAQPDQSRIVALNAHTFLRNGGHFLISIKANCIDSTASAEAVFASEVRKLQQENLKPQEQLTLEPYERDH 300
[Close]
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBLL1_HUMAN (rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS=Homo sapiens GN=FBLL1 PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 6.159e-66
Identity = 120/152 (78.95%), Postives = 139/152 (91.45%), Query Frame = 2 
Query:    5 IWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            I IKP  +VLYLGAASGTTVSHVSDI+GP+G+VYAVEFSHR+GRDLVN+AKKRTN+IP++EDARHP KYRML+GMVDVIF+DVAQPDQ+RI+ALNA  FL+ GGHF+ISIKANCIDST  AEAVF SEV+KLQQ+  KP EQ+TLEP+ERDH
Sbjct:  167 IHIKPKSKVLYLGAASGTTVSHVSDIIGPDGLVYAVEFSHRAGRDLVNVAKKRTNIIPVLEDARHPLKYRMLIGMVDVIFADVAQPDQSRIVALNAHTFLRNGGHFLISIKANCIDSTASAEAVFASEVRKLQQENLKPQEQLTLEPYERDH 318
[Close]
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_DROER (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta GN=Fib PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 8.044e-66
Identity = 121/152 (79.61%), Postives = 136/152 (89.47%), Query Frame = 2 
Query:    5 IWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            I + PG +VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVGMVD IF+DVAQPDQ RI+ALNA +FLK GGHFVISIKA+CIDST   EAVF SEVKK+Q D+ KP EQ+TLEP+ERDH
Sbjct:  181 IHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALNAQHFLKNGGHFVISIKASCIDSTAQPEAVFASEVKKMQADKLKPQEQLTLEPYERDH 332
[Close]
BLAST of CX300136 vs. ExPASy Swiss-Prot
Match: FBRL_DROME (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster GN=Fib PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 1.792e-65
Identity = 120/152 (78.95%), Postives = 136/152 (89.47%), Query Frame = 2 
Query:    5 IWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 460
            I + PG +VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVGMVD IF+DVAQPDQ RI+ALNA +FLK GGHFVISIKA+CIDST   EAVF +EVKK+Q D+ KP EQ+TLEP+ERDH
Sbjct:  180 IHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALNAQHFLKNGGHFVISIKASCIDSTAQPEAVFAAEVKKMQADKLKPQEQLTLEPYERDH 331
The following BLAST results are available for this feature:
BLAST of CX300136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
FBRL2_ARATH1.082e-7894.12rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabi... [more]
FBRL1_ARATH1.563e-7793.46rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabi... [more]
FBRL_RAT2.500e-6780.92rRNA 2'-O-methyltransferase fibrillarin OS=Rattus ... [more]
FBRL_MOUSE2.500e-6780.92rRNA 2'-O-methyltransferase fibrillarin OS=Mus mus... [more]
FBRL_HUMAN2.500e-6780.92rRNA 2'-O-methyltransferase fibrillarin OS=Homo sa... [more]
FBRL_XENLA4.265e-6780.26rRNA 2'-O-methyltransferase fibrillarin OS=Xenopus... [more]
FBLL1_MOUSE6.159e-6678.95rRNA/tRNA 2'-O-methyltransferase fibrillarin-like ... [more]
FBLL1_HUMAN6.159e-6678.95rRNA/tRNA 2'-O-methyltransferase fibrillarin-like ... [more]
FBRL_DROER8.044e-6679.61rRNA 2'-O-methyltransferase fibrillarin OS=Drosoph... [more]
FBRL_DROME1.792e-6578.95rRNA 2'-O-methyltransferase fibrillarin OS=Drosoph... [more]

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Properties
Property NameValue
Genbank descriptionC07006F04SK SaltLeaf1 Citrus clementina cDNA clone C07006F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300136 ID=CX300136; Name=CX300136; organism=Citrus clementina; type=EST; length=462bp
TAATATTTGGATTAAACCTGGTGTTAGGGTTCTATACCTTGGTGCTGCTT
CCGGCACAACTGTCTCACATGTTTCGGACATTGTTGGCCCTAATGGAGTA
GTTTATGCAGTGGAATTTTCTCATAGAAGTGGTAGAGACTTGGTCAATAT
GGCAAAGAAGAGAACCAATGTTATACCCATAATTGAAGATGCTAGACATC
CTGCCAAGTACCGTATGTTGGTCGGTATGGTAGATGTAATATTTTCTGAC
GTTGCCCAACCGGATCAGGCGAGGATTTTAGCCCTGAATGCATCATATTT
TCTCAAAGCTGGAGGTCATTTTGTTATTTCTATCAAGGCAAACTGCATAG
ATTCCACTGTTCCTGCTGAGGCAGTGTTCCAGAGTGAAGTTAAGAAGCTG
CAACAGGATCAGTTCAAACCCTTTGAGCAAGTGACACTCGAGCCCTTTGA
GCGAGACCACGC
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