CX300274

Overview
NameCX300274
Unique NameCX300274
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length487
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10443 contig Ccv1_Contig10443:189..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300274 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 1.615e-41
Identity = 84/167 (50.30%), Postives = 111/167 (66.47%), Query Frame = 1
Query:    1 KKIPVLIHNDKPVCESLIIVEYVDEAWSSSG---PSILPSDPYDRAVARFWAAYVDEKLFPA-LKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMP-ETDKL 486
            K +PVL+H  +PV ES +IV+Y+DE W       PS++PSDPY+RAVARFWAAYVD+K+ PA L  +  +   E + AA+ Q +  L  LE AF +CSKGKPFFGG  +GF+D+  G YLGW    +K+I  +L+D  +TP L  W ERF A  A K V+P + DKL
Sbjct:   54 KSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKL 220          
BLAST of CX300274 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 9.822e-31
Identity = 71/162 (43.83%), Postives = 94/162 (58.02%), Query Frame = 1
Query:    1 KKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 486
            KKIPVLIHN KP+CES+I VEY++E W    P++LPSDPYDRA ARFWA Y+D+KL+   + + +  G E +EAA +  IE L +LE A       KP+FGG   GF+DIA   Y  W    E         E + P    WA+R     +V   +P+  K+
Sbjct:   53 KKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKG-EEQEAAKKDFIECLKVLEGAL----GDKPYFGGESFGFVDIALIGYYSWFYAYETF--GNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKV 207          
BLAST of CX300274 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.858e-30
Identity = 70/162 (43.21%), Postives = 94/162 (58.02%), Query Frame = 1
Query:    1 KKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 486
            KKIPVLIHN KP+CES+I VEY++E W    PS+LPSDPYDRA ARFWA Y+D+KL+   + + +  G E +EAA +  IE L +LE A       +P+FGG   GF+DIA   +  W    E         E + P    WA+R     +V   +P+  K+
Sbjct:   53 KKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKG-EEQEAAKKDFIECLKVLEGAL----GDRPYFGGESFGFVDIALIGFYSWFYAYETF--GNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKV 207          
BLAST of CX300274 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 8.315e-30
Identity = 66/163 (40.49%), Postives = 102/163 (62.58%), Query Frame = 1
Query:    1 KKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPAL-KSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 486
            KK+PV +HN++P+ ESL+IVEY+DE W ++   ILPSDPY RA+ARFW+ ++D+K+  A+ KS+ + D  E +E  +E+  E L  LE+      K K FFGG + G +DIA      W+ + +++  ++L    K P L+KW++ F     V +V+P  D L
Sbjct:   55 KKVPVFVHNEQPIAESLVIVEYIDETWKNN--PILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKE-REKNVEETYEALQFLENEL----KDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPL 210          
BLAST of CX300274 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 8.315e-30
Identity = 69/169 (40.83%), Postives = 103/169 (60.95%), Query Frame = 1
Query:    4 KIPVLIHND-KPVCESLIIVEYVDEAWSSSGPS-----ILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQI--GFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 486
            KIPVL+  D + +CES +IV+Y+++    SG +     +LP DPY+RA+ RFW A++D+K +PAL ++  A    A+  A E     L LLE+AF   S G+ FF G     G LD+A GC+L  +R  E++  + L+D   TP L  W++RF A  A K V+P+T+K+
Sbjct:   50 KIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKV 218          
BLAST of CX300274 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.270e-26
Identity = 65/162 (40.12%), Postives = 94/162 (58.02%), Query Frame = 1
Query:    1 KKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 486
            KK+PVLIHN KP+ ES+II+EY+DE +   GPSILP DPYDRA+ARFWA ++D+K+   + +       E +E   E++ E L +L++      K K FF G + GF DIA      W+ V E+     L+   K P   KW + +   + V + +P  D+L
Sbjct:   51 KKVPVLIHNGKPIVESMIILEYIDETFE--GPSILPKDPYDRALARFWAKFLDDKVAAVVNTFFRK--GEEQEKGKEEVYEMLKVLDNEL----KDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDEL 204          
BLAST of CX300274 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 5.577e-26
Identity = 65/162 (40.12%), Postives = 95/162 (58.64%), Query Frame = 1
Query:    1 KKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 486
            KK+PVLIHN K + ES++I+EY+DE +   GPSILP DPYDRA+ARFWA ++D+K+   +K+       E +E   E++ E L +L++      K K FF G + GF DIA      W+ V E+   V L+   K P   KW   +   + +K+ +P  D+L
Sbjct:   51 KKVPVLIHNGKRIVESMVILEYIDETFE--GPSILPKDPYDRALARFWAKFLDDKVPAVVKTF--LRKGEEQEKDKEEVCEMLKVLDNEL----KDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDEL 204          
BLAST of CX300274 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 9.514e-26
Identity = 61/162 (37.65%), Postives = 89/162 (54.94%), Query Frame = 1
Query:    1 KKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 486
            KKIPVLIHN KP+CES IIV+Y+DE W+   P ++PSDPY R+ ARFW  Y+D+K++   K +  + G E +E   ++LI     LE+        KPF+G    GF+D+    +  W    E     K+  E + P L  W +R      V + +P+  K+
Sbjct:   52 KKIPVLIHNGKPICESAIIVQYIDEVWNDKSP-LMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGK-KELISIFKQLEETLT----DKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKM--EEECPKLMAWVKRCMERETVSNTLPDAKKV 205          
BLAST of CX300274 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.243e-25
Identity = 63/162 (38.89%), Postives = 95/162 (58.64%), Query Frame = 1
Query:    1 KKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 486
            KK+PVLIHN KP+ ES++I+EY+DE +   GPSILP DPYDRA+ARFW+ ++ +K+   + +       E +E   E++ E L +L++      K K FF G + GF DIA      W+ V E+   V L+   K P   +W + +   + VK+ +P  D+L
Sbjct:   51 KKVPVLIHNGKPIVESMVILEYIDETF--EGPSILPKDPYDRALARFWSKFLGDKVAAVVNTFFRK--GEEQEKGKEEVYEMLKVLDNEL----KDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDEL 204          
BLAST of CX300274 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.119e-25
Identity = 67/162 (41.36%), Postives = 93/162 (57.41%), Query Frame = 1
Query:    1 KKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 486
            KKIPVLIHN K +CES++I+EY+DEA+   GPSILP DPYDRA+ARFWA YV++K     KS  S    E +E A E+  E L +L++ F    K K  F G + GF DI       ++ + E++  + L    K P    W + +C     ++  P  D+L
Sbjct:   51 KKIPVLIHNGKCICESMVILEYIDEAFE--GPSILPKDPYDRALARFWAKYVEDKGAAVWKSFFSK--GEEQEKAKEEAYEMLKILDNEF----KDKKCFVGDKFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEYCTQN--EEYFPSRDEL 202          
The following BLAST results are available for this feature:
BLAST of CX300274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTU6_ORYSJ1.615e-4150.30Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX4_TOBAC9.822e-3143.83Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC2.858e-3043.21Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX6_SOYBN8.315e-3040.49Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX2_MAIZE8.315e-3040.83Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
GSTX2_TOBAC4.270e-2640.12Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC5.577e-2640.12Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_SOYBN9.514e-2637.65Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTX3_TOBAC1.243e-2538.89Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_SOLTU2.119e-2541.36Probable glutathione S-transferase OS=Solanum tube... [more]

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Properties
Property NameValue
Genbank descriptionC07008C01SK NTLeaf1 Citrus clementina cDNA clone C07008C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300274 ID=CX300274; Name=CX300274; organism=Citrus clementina; type=EST; length=487bp
AAGAAAATCCCAGTTCTGATTCACAATGATAAGCCTGTTTGCGAATCTCT
CATCATTGTCGAGTACGTGGATGAGGCTTGGTCCTCTTCAGGTCCCTCTA
TTCTTCCTTCTGATCCTTATGACCGTGCCGTTGCTCGTTTCTGGGCCGCT
TATGTTGATGAGAAGTTGTTCCCTGCCTTGAAAAGCATTGGTAGTGCAGA
TGGAGCGGAAGCTAAGGAAGCTGCGATTGAGCAATTGATTGAAGGCTTGG
TTTTGCTGGAGGATGCTTTTGTTAAGTGTAGCAAAGGGAAGCCTTTCTTT
GGTGGAAGCCAAATTGGGTTTCTTGACATTGCATTTGGTTGCTACTTGGG
ATGGGTGAGAGTGACAGAGAAAATGATTGAGGTGAAGCTCCTTGATGAAG
TCAAAACTCCTGGACTGTTCAAATGGGCTGAGAGATTCTGTGCTGATGCC
GCTGTCAAAGATGTTATGCCTGAGACTGATAAGCTTG
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