CX300393

Overview
NameCX300393
Unique NameCX300393
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length512
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig783 contig Ccv1_Contig783:12..523. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXD2_ARATH (Annexin D2 OS=Arabidopsis thaliana GN=ANN2 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 4.029e-57
Identity = 107/158 (67.72%), Postives = 132/158 (83.54%), Query Frame = 2
Query:    2 GDEVNITLAKSEAKILHEKISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKD-EYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGDA 472
            GD+VN+ LA+SEAKILHEK+S K+Y+D+D IRIL TRSKAQ+ ATLN Y N YGN I+++L+ +  D +Y+ LLRA + CL  PE +FEK+LRL+INK GTDE  LTRVVTTR EVD++ IK+EYQRRNS+PLDRA+ KDTSGDYE ML+ALLGHGDA
Sbjct:  160 GDDVNMMLARSEAKILHEKVSEKSYSDDDFIRILTTRSKAQLGATLNHYNNEYGNAINKNLKEESDDNDYMKLLRAVITCLTYPEKHFEKVLRLSINKMGTDEWGLTRVVTTRTEVDMERIKEEYQRRNSIPLDRAIAKDTSGDYEDMLVALLGHGDA 317          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXD1_ARATH (Annexin D1 OS=Arabidopsis thaliana GN=ANN1 PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 4.029e-57
Identity = 109/158 (68.99%), Postives = 134/158 (84.81%), Query Frame = 2
Query:    2 GDEVNITLAKSEAKILHEKISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLE-ADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGDA 472
            GDEVN+TLAK EAK++HEKI +K YNDED+IRIL+TRSKAQINAT N+Y++ +G +I + LE  D  D++L LLR+T+QCL RPE YF  +LR AINK GTDEGALTR+VTTRAE+DLKVI +EYQRRNS+PL++A+ KDT GDYEKML+ALLG  DA
Sbjct:  160 GDEVNMTLAKQEAKLVHEKIKDKHYNDEDVIRILSTRSKAQINATFNRYQDDHGEEILKSLEEGDDDDKFLALLRSTIQCLTRPELYFVDVLRSAINKTGTDEGALTRIVTTRAEIDLKVIGEEYQRRNSIPLEKAITKDTRGDYEKMLVALLGEDDA 317          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXD7_ARATH (Annexin D7 OS=Arabidopsis thaliana GN=ANNAT7 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 2.211e-55
Identity = 107/157 (68.15%), Postives = 127/157 (80.89%), Query Frame = 2
Query:    2 GDEVNITLAKSEAKILHEKISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGDA 472
            GDEVN+TLA+SEAKILHEKI  K Y D+DLIRIL TRSKAQI+ATLN YKN +G  + + L+ D ++EY+ LL+A ++CL  PE YFEK+LR AINK GTDE  LTRVVTTRAE D++ IK+EY RRNSVPLDRA+ KDT GDYE +LLALLGH  A
Sbjct:  160 GDEVNMTLARSEAKILHEKIKEKAYADDDLIRILTTRSKAQISATLNHYKNNFGTSMSKYLKEDSENEYIQLLKAVIKCLTYPEKYFEKVLRQAINKLGTDEWGLTRVVTTRAEFDMERIKEEYIRRNSVPLDRAIAKDTHGDYEDILLALLGHDHA 316          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXD6_ARATH (Annexin D6 OS=Arabidopsis thaliana GN=ANN6 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 6.433e-55
Identity = 105/156 (67.31%), Postives = 127/156 (81.41%), Query Frame = 2
Query:    5 DEVNITLAKSEAKILHEKISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGDA 472
            DEVN+ LA+SEAK LH+KI+ K Y DEDLIRIL TRSKAQINATLN +K+ +G+ I++ L+ D  D+Y+ LL+  ++CL  PE YFEK+LR AIN+ GTDE ALTRVVTTRAEVDL+ IK+EY RRNSVPLDRA+  DTSGDY+ MLLALLGH  A
Sbjct:  163 DEVNVKLARSEAKTLHKKITEKAYTDEDLIRILTTRSKAQINATLNHFKDKFGSSINKFLKEDSNDDYVQLLKTAIKCLTYPEKYFEKVLRRAINRMGTDEWALTRVVTTRAEVDLERIKEEYLRRNSVPLDRAIANDTSGDYKDMLLALLGHDHA 318          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANX4_FRAAN (Annexin-like protein RJ4 OS=Fragaria ananassa PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 1.701e-39
Identity = 81/156 (51.92%), Postives = 111/156 (71.15%), Query Frame = 2
Query:    2 GDEVNITLAKSEAKILHEKISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGD 469
            G E+N  LA SEA ILH+ I +K +N E++IRIL+TRSK Q+ AT N+Y++  G  I ++L  +  +++   L   ++CL  P+ YFEK+LR AI + GTDE ALTRV+ TRAE DL+ IK+ Y ++NSVPL++AV KDTSGDY+  LL LLG  D
Sbjct:  159 GHEINAKLANSEADILHDAIKDKAFNHEEIIRILSTRSKTQLMATFNKYRDDQGISISKNLLEEGANDFQKALHTAIRCLNDPKKYFEKVLRNAIKRVGTDEDALTRVIVTRAERDLRDIKEVYYKKNSVPLEQAVAKDTSGDYKAFLLTLLGKED 314          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXD3_ARATH (Annexin D3 OS=Arabidopsis thaliana GN=ANN3 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 7.670e-24
Identity = 59/153 (38.56%), Postives = 88/153 (57.52%), Query Frame = 2
Query:    5 DEVNITLAKSEAKILHEKISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYL-DLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLG 460
            D  +  +A  EA +L E I  K  + + ++ IL TRS  Q+  T   YK  YG  ID+D++  P D  L  LL+  + C+  PE +F K++R +I   GTDE +LTR + TRAE+DL  ++ EY    +  +D A+  D SGDY+  ++ LLG
Sbjct:  166 DRTDAEVATIEAAMLREAIEKKQLDHDHVLYILGTRSIYQLRETFVAYKKNYGVTIDKDVDGCPGDADLRSLLKVAIFCIDTPEKHFAKVVRDSIEGFGTDEDSLTRAIVTRAEIDLMKVRGEYFNMYNTSMDNAITGDISGDYKDFIITLLG 318          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANX10_DROME (Annexin-B10 OS=Drosophila melanogaster GN=AnnX PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 5.145e-20
Identity = 54/151 (35.76%), Postives = 88/151 (58.28%), Query Frame = 2
Query:   11 VNITLAKSEAKILHEKISNKTYNDEDLI-RILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLG 460
            V++  AK +A  L+     K   DE++  RI++  S  Q+     +YK + G  I+Q ++ +  DE  + + A V+C+  P  +F   L  A+N  GTD+  L R++ +R+E+DL+ IK E++R  +  L  AVV +TSGDY++ L ALLG
Sbjct:  168 VDVGQAKEQAAQLYSAGEAKLGTDEEVFNRIMSHASFPQLRLVFEEYKVLSGQTIEQAIKHEMSDELHEAMMAIVECVQSPAAFFANRLYKAMNGAGTDDATLIRIIVSRSEIDLETIKQEFERIYNRTLHSAVVAETSGDYKRALTALLG 318          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXA3_MOUSE (Annexin A3 OS=Mus musculus GN=Anxa3 PE=2 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 1.955e-19
Identity = 53/155 (34.19%), Postives = 84/155 (54.19%), Query Frame = 2
Query:    8 EVNITLAKSEAKILHEKISNKTYNDED-LIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGD 469
            +V+  LAK +A+IL+    NK   DED    +L  RS  Q+  T ++Y+N+   DI+  ++ +    + DLL A V C      +  + L  A+   GTDE  L R++ +R+E+DL  I+ E+++     L  A+  DTSGDY  +LL + G  D
Sbjct:  169 KVDEHLAKKDAQILYNAGENKWGTDEDKFTEVLCLRSFPQLKLTFDEYRNISQKDIEDSIKGELSGHFEDLLLAIVHCARNTPAFLAERLHQALKGAGTDEFTLNRIMVSRSEIDLLDIRHEFKKHYGYSLYSAIQSDTSGDYRTVLLKICGEDD 323          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANX13_HUMAN (Annexin A13 OS=Homo sapiens GN=ANXA13 PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 5.688e-19
Identity = 61/157 (38.85%), Postives = 87/157 (55.41%), Query Frame = 2
Query:    2 GDEVNITLAKSEAKILHEKISNKTYNDEDLIR-ILATRSKAQINATLNQYKNVYGNDIDQDLE----ADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALL 457
            GD+V+  LA  +AK L++    +   DE     +LA RS  Q+ AT   Y+ + G DI++ +E     D +  YL L+R    C    E YF + L  ++   GTDE  L R+V TRAEVDL+ IK ++Q +    L   V  DTSGD+ K+L+ALL
Sbjct:  163 GDDVDKDLAGQDAKDLYDAGEGRWGTDELAFNEVLAKRSYKQLRATFQAYQILIGKDIEEAIEEETSGDLQKAYLTLVRCAQDC----EDYFAERLYKSMKGAGTDEETLIRIVVTRAEVDLQGIKAKFQEKYQKSLSDMVRSDTSGDFRKLLVALL 315          

HSP 2 Score: 68.1662 bits (165), Expect = 2.559e-11
Identity = 42/141 (29.79%), Postives = 74/141 (52.48%), Query Frame = 2
Query:   35 EAKILHEKISNKTYNDEDLIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALL 457
            +AK L++       N+  +I IL+ R+  +      +YK  YG ++++ L+++    +    +  +  L RP  Y  + L+ A+   GTDE  L  V+ TR   ++  IK+ YQR     L+  V  DTSG+ +K+L++LL
Sbjct:   19 DAKKLNKACKGMGTNEAAIIEILSGRTSDERQQIKQKYKATYGKELEEVLKSELSGNFE---KTALALLDRPSEYAARQLQKAMKGLGTDESVLIEVLCTRTNKEIIAIKEAYQRLFDRSLESDVKGDTSGNLKKILVSLL 156          
BLAST of CX300393 vs. ExPASy Swiss-Prot
Match: ANXD5_ARATH (Annexin D5 OS=Arabidopsis thaliana GN=ANN5 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 7.429e-19
Identity = 51/154 (33.12%), Postives = 87/154 (56.49%), Query Frame = 2
Query:    2 GDEVNITLAKSEAKILHEKISNKTYNDED-LIRILATRSKAQINATLNQYKNVYGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLG 460
            G E++    +++A+ L   ++ K  +D+  LI+I   RS+  + A  + Y+++YG ++ + +  + +  +  +L   +QC      YF K LR ++   GTD+ AL R+V TRAEVD++ I  EY++R    L  AV  DT+  Y   LL+LLG
Sbjct:  160 GPEIDNASVENDARTLKSAVARKHKSDDQTLIQIFTDRSRTHLVAVRSTYRSMYGKELGKAIRDETRGNFEHVLLTILQCAENSCFYFAKALRKSMKGLGTDDTALIRIVVTRAEVDMQFIITEYRKRYKKTLYNAVHSDTTSHYRTFLLSLLG 313          
The following BLAST results are available for this feature:
BLAST of CX300393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
ANXD2_ARATH4.029e-5767.72Annexin D2 OS=Arabidopsis thaliana GN=ANN2 PE=2 SV... [more]
ANXD1_ARATH4.029e-5768.99Annexin D1 OS=Arabidopsis thaliana GN=ANN1 PE=1 SV... [more]
ANXD7_ARATH2.211e-5568.15Annexin D7 OS=Arabidopsis thaliana GN=ANNAT7 PE=2 ... [more]
ANXD6_ARATH6.433e-5567.31Annexin D6 OS=Arabidopsis thaliana GN=ANN6 PE=2 SV... [more]
ANX4_FRAAN1.701e-3951.92Annexin-like protein RJ4 OS=Fragaria ananassa PE=2... [more]
ANXD3_ARATH7.670e-2438.56Annexin D3 OS=Arabidopsis thaliana GN=ANN3 PE=2 SV... [more]
ANX10_DROME5.145e-2035.76Annexin-B10 OS=Drosophila melanogaster GN=AnnX PE=... [more]
ANXA3_MOUSE1.955e-1934.19Annexin A3 OS=Mus musculus GN=Anxa3 PE=2 SV=3[more]
ANX13_HUMAN5.688e-1938.85Annexin A13 OS=Homo sapiens GN=ANXA13 PE=1 SV=3[more]
ANXD5_ARATH7.429e-1933.12Annexin D5 OS=Arabidopsis thaliana GN=ANN5 PE=2 SV... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC07009F12SK SaltLeaf1 Citrus clementina cDNA clone C07009F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300393 ID=CX300393; Name=CX300393; organism=Citrus clementina; type=EST; length=512bp
GGGTGATGAGGTGAACATTACACTTGCAAAATCAGAAGCTAAGATTCTCC
ATGAGAAGATTTCGAATAAGACTTACAATGATGAGGATCTCATCAGGATC
TTGGCTACAAGGAGCAAAGCACAGATCAATGCGACTCTGAATCAATACAA
GAATGTATATGGGAATGATATTGATCAGGACTTAGAGGCTGACCCTAAAG
ATGAGTACCTCGACCTACTGAGGGCCACAGTTCAGTGCTTAGTCCGCCCT
GAACATTATTTTGAGAAGATACTTCGTCTGGCAATTAACAAACAGGGAAC
AGATGAAGGGGCTCTTACTAGAGTCGTCACCACAAGGGCCGAGGTCGACT
TGAAGGTCATAAAAGATGAGTACCAGAGGAGGAACAGTGTTCCTCTGGAT
CGCGCCGTTGTCAAGGACACCTCTGGGGACTACGAAAAAATGCTTCTGGC
ACTTTTAGGACATGGGGATGCTTGAGTTGTTCCCTATTTCTTGAAGGATT
GAGAGGCAATAT
back to top