CX300406

Overview
NameCX300406
Unique NameCX300406
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length474
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX300406 vs. ExPASy Swiss-Prot
Match: Y1487_ARATH (Uncharacterized protein At1g14870 OS=Arabidopsis thaliana GN=At1g14870 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.461e-20
Identity = 42/75 (56.00%), Postives = 48/75 (64.00%), Query Frame = 3 
Query:  246 KNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGXXXXXXXXXXXXXXXXXXFYRSKMRKQY 470
            +  WS+G CDCFSD KNCCIT WCPC+TFGQ+AEIVD+GS+SCG  G                  FYR KMR QY
Sbjct:   13 EGEWSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCACIYSCFYRGKMRAQY 87
The following BLAST results are available for this feature:
BLAST of CX300406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1487_ARATH1.461e-2056.00Uncharacterized protein At1g14870 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC07009H04SK SaltLeaf1 Citrus clementina cDNA clone C07009H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300406 ID=CX300406; Name=CX300406; organism=Citrus clementina; type=EST; length=474bp
TCAAGTTTCAGAACTAATAAACACTTCGCAATTTCTCCTACTCTTCCGAA
TAATATTTGCAAGTGCAGCGGCTCTGGAATCAACTTATTCGAGTGAACTA
CATAATTTTATTTTTCCTGAGTTGCAGATTTTTGAGTCATACAATCATGT
CTTCCATAAAGCCGGATGAGTTCTCGTCCTTGCCGCAAACAACAACTACT
GGGATTCTTATGCTGAATTACCGTTACCAAAACCGGGTGAAAAATAAGAA
TTCTTGGTCCTCGGGCCTCTGTGACTGCTTCTCTGATTATAAAAACTGTT
GCATAACATGCTGGTGTCCATGCATGACTTTTGGGCAAATTGCTGAAATT
GTGGATAAAGGATCATCATCTTGCGGTGTAAATGGGGCGCTTTGCGCTTT
AATGTGCTGCGTGACATGCTGCCCGTGCTGTTACACATGCTTTTACCGAT
CAAAAATGAGGAAGCAGTACACGC
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