CX300470

Overview
NameCX300470
Unique NameCX300470
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length360
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX300470 vs. ExPASy Swiss-Prot
Match: Y4115_ARATH (Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.493e-14
Identity = 38/55 (69.09%), Postives = 41/55 (74.55%), Query Frame = 2 
Query:    5 IVGAINSVXXXXXXXXXXXXXYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 169
            +VGAINSV             YTGWFVYRYLLFKSSRKELA DIE+LKKKIAG+E
Sbjct:  110 VVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164
The following BLAST results are available for this feature:
BLAST of CX300470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4115_ARATH9.493e-1469.09Uncharacterized protein At4g01150, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionC07010F01SK SaltLeaf1 Citrus clementina cDNA clone C07010F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300470 ID=CX300470; Name=CX300470; organism=Citrus clementina; type=EST; length=360bp
AACTATTGTTGGTGCCATCAATTCAGTGCCTTTGCTTCCCAAACTCTTGG
AGTTGATTGGACTTGGTTATACTGGATGGTTTGTCTACAGATACCTTCTC
TTCAAGTCAAGCAGAAAAGAACTAGCCACGGATATTGAAGCACTGAAGAA
GAAGATTGCTGGAACTGAATAGATTGTACATTCTGGAGGCAATTCATGTT
TGTCCCTGATAGTCATTTATTTTGGTCCTCTATCATTGCATATGAGGCAC
TTGTATCCTGTAGAGTAGGCTGCGTACGGATTCGTTTTATCCCTGTATTT
TCCAGTATATCCCTGGAATAAGAGATTTGACAAAGTTATGTGTAAAAAAA
AAAAAAAAAA
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